FFCP PHASE1:Hg19::chr10:6622296..6622325,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5588 | |EntrezGene=5588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9410 | |HGNC=9410 | ||
|TSSclassifier=strong | |||
|UniProt=Q04759 | |UniProt=Q04759 | ||
|association_with_transcript=-33bp_to_ENST00000263125_5end | |association_with_transcript=-33bp_to_ENST00000263125_5end | ||
|cluster_id=chr10:6622296..6622325,- | |||
|coexpression_cluster_id=C18 | |coexpression_cluster_id=C18 | ||
|description=CAGE_peak_2_at_PRKCQ_5end | |description=CAGE_peak_2_at_PRKCQ_5end | ||
|id=chr10:6622296..6622325,- | |id=chr10:6622296..6622325,- | ||
|ontology_enrichment_celltype=CL:0000084!7.82e-16!25;CL:0000827!7.82e-16!25;CL:0000791!1.00e-14!18;CL:0000789!1.00e-14!18;CL:0002420!1.00e-14!18;CL:0002419!1.00e-14!18;CL:0000790!1.00e-14!18;CL:0000625!1.23e-09!11;CL:0000838!1.66e-08!52;CL:0000037!4.31e-08!172;CL:0000566!4.31e-08!172;CL:0000542!4.34e-08!53;CL:0000051!4.34e-08!53;CL:0000988!5.70e-08!182;CL:0002032!5.94e-07!165;CL:0000837!5.94e-07!165 | |ontology_enrichment_celltype=CL:0000084!7.82e-16!25;CL:0000827!7.82e-16!25;CL:0000791!1.00e-14!18;CL:0000789!1.00e-14!18;CL:0002420!1.00e-14!18;CL:0002419!1.00e-14!18;CL:0000790!1.00e-14!18;CL:0000625!1.23e-09!11;CL:0000838!1.66e-08!52;CL:0000037!4.31e-08!172;CL:0000566!4.31e-08!172;CL:0000542!4.34e-08!53;CL:0000051!4.34e-08!53;CL:0000988!5.70e-08!182;CL:0002032!5.94e-07!165;CL:0000837!5.94e-07!165 | ||
|ontology_enrichment_celltype_v019=CL:0000791;4.46e-22;18!CL:0000789;4.46e-22;18!CL:0002419;4.46e-22;18!CL:0000084;3.35e-21;25!CL:0000625;4.22e-14;11!CL:0000624;1.13e-08;6!CL:0000542;4.93e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,4.22e-22,18;CL:0000789,4.22e-22,18;CL:0002420,4.22e-22,18;CL:0002419,4.22e-22,18;CL:0000790,4.22e-22,18;CL:0000084,2.55e-21,25;CL:0000827,2.55e-21,25;CL:0000625,3.75e-14,11;CL:0000838,5.88e-14,52;CL:0000542,1.69e-13,53;CL:0000051,1.69e-13,53;CL:0000988,4.28e-12,177;CL:0000037,6.42e-12,168;CL:0002032,1.08e-10,161;CL:0000837,1.08e-10,161;CL:0000624,1.15e-08,6 | |||
|ontology_enrichment_development_v019=CL:0000790;4.46e-22;18!CL:0000051;4.93e-07;53 | |||
|ontology_enrichment_disease=DOID:1240!1.34e-11!39;DOID:8692!1.87e-10!31;DOID:2531!2.49e-09!51;DOID:0060083!2.49e-09!51 | |ontology_enrichment_disease=DOID:1240!1.34e-11!39;DOID:8692!1.87e-10!31;DOID:2531!2.49e-09!51;DOID:0060083!2.49e-09!51 | ||
|ontology_enrichment_disease_v019=DOID:8692;5.52e-14;31!DOID:1240;2.44e-11;39!DOID:2531;1.78e-08;51!DOID:0060083;1.78e-08;51!DOID:1036;7.21e-08;8 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,6.19e-15,39;DOID:8692,2.68e-14,31;DOID:2531,4.71e-12,51;DOID:0060083,4.71e-12,51;DOID:1036,1.04e-07,8 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.18e-13!115;UBERON:0000178!4.03e-10!15;UBERON:0000179!4.03e-10!15;UBERON:0000463!4.03e-10!15 | |ontology_enrichment_uberon=UBERON:0007023!1.18e-13!115;UBERON:0000178!4.03e-10!15;UBERON:0000179!4.03e-10!15;UBERON:0000463!4.03e-10!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.22e-15;15!UBERON:0000179;8.22e-15;15!UBERON:0000463;8.22e-15;15!UBERON:0002390;7.78e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,6.54e-15,15;UBERON:0000179,6.54e-15,15;UBERON:0000463,6.54e-15,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.737201809504527,0,0.218441372130172,0,0,0,0,0,0,0,0.369363174230364,0.408001382488506,0.313454721478088,0.286235987131057,0.821246550437305,0.376627918784408,3.132949635666,3.20192298854788,3.62069594042925,1.96682138424452,2.30297638858328,0.928896739896456,0,0.90361775633475,0,0,0,5.5784083473621,1.10799081706375,2.00544447470142,3.47217393145363,0.895661896959697,1.6194683300949,0.77272670290256,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0.188242339542605,0,0,0,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0.736555271975129,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,2.64342657158052,3.36305137788922,5.00429761072646,11.9992959769438,9.43225830597995,11.5136839439725,8.02495177875255,6.19252306603822,4.73447805734733,11.6896037044747,7.5759110681918,7.07054177939609,8.63982188876122,11.3737622781307,9.22257502024861,9.62439171943099,5.42645085192131,8.29050053357545,6.0858648004361,6.96946846861684,7.75868401460168,11.4989076185474,7.59172596073693,9.96373283364995,5.84166657320471,9.86776798876061,7.96413535810242,5.20866763085135,6.65316431113862,11.1425588117552,12.4147012819786,9.99445812418767,8.76075832562862,10.6746639599736,6.45141578319144,6.68600489458768,7.82051780967114,0,0,0,0.361439152384566,0,0,0,0,1.03988298880475,0.221729397462564,0.087834785693126,1.37528029272598,0.728590576585084,0.741568885568859,0.649094787309367,0,0.26591592103773,0,0,0.371457501329565,0.198762407366705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.357198913136319,1.34717623575702,0.225222960966644,0,0,0.366403487860815,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438977620880838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,1.72082757233402,1.46368447355514,1.98794652482228,1.51052125730374,1.34759371519982,1.00928340350251,2.55484151353081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0.882926198829301,0.983907508344908,0,0.98775256867763,2.24803506515239,1.00528972411631,2.96283024507295,0.325808305310325,0,0,0.579652024875384,0.117408694235822,0.144366447761074,0,0,0,0,0.246217006087397,0,0,0.93733833986777,2.01578553838631,0.992425680696705,0.0895585227028483,0.871901815541886,2.68367875415648,0.492663237895943,3.16974362447614,0,0.144119953416961,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.532844358032199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.14715032776051,5.12279976525011,5.82194452120697,9.88241379354062,0.76228387266739,0,0,0.502548796003046,0,0,0,0.414415513436035,0.12269149171914,0,0,0,0,0.157702415033935,0,0,0,0,0,0,0,0,0,5.78950473144085,2.80428461064202,1.81436848265855,0.303127571446259,0,1.5119514666484,0,0,0,0,0,0,0,0,0,0,0,0,1.81289174387433,0.40101294060657,0.184161977871793,0,0.182091168006717,0,3.15839729035188,0.385076685522074,0.784349769176855,1.46139224653261,1.47772280450026,0,0.170093705276516,0.431831832204279,0,0.270946437543853,0,0.764628819135115,0.831076008928724,1.56712328305525,0.219259876645935,0.261435451024901,0.769350375349168,0.328014645699706,1.62689197332152,0.515205058238611,0,0,3.44559322797703,1.30012049207304,0,0,0,0.15350367472613,0,0,0.145016693914229,0.0852266274161009,0,0.330569830721956,0.960950336825531,2.67986696238627,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0.42793898803392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0.143411352204052,0,0,0.354761064070598,0.422215270595328,0,0.379473173765715,0.349934720244983,1.82822014178473,0.670302275535787,1.08890984861323,0.282431402330337,0.86101074534246,0,0.443430153536676,0.459446800413919,9.13405696617905,6.117097657139,5.12682468456746,5.47933083552915,2.05681136543097,4.53931317834902,3.7802200606668,6.34500141035416,0.106824071127473,0,0,0,0.721346064882224,6.18934037131203,2.8696729091188,3.5924286857907,3.06408592211787,10.5836791361941,2.27235358192189,4.21195767170188,0.684704037099577,0.313359791546046,0,8.46458889008017,1.1241165257259,0,2.12923118845163,1.37402137902306,1.53620382154229,2.46043718681657,1.66849141711908,0,5.2897173040096,0,4.32729085561573,8.99294313594114,5.63948020351398,0,0.293016358543788,2.18448939149124,0,4.54617834890261,0,0,0,0,0.281338832821026,0,0.988823245360557,0,0,4.69682656402951,0.755798243562828,0.102268682502155,0,0,0,0.716084698702437,0.511572370226872,0.295930216910801,4.7896618469388,0,1.93866549219044,0.927680981618513,0,0,0,0,0.455173793141999,0,0,0,0,0,0.885741385813839,0.60298219312704,0,0.221158519862449,0.591095237907095,0.219385397153973,0,0,0.461701551022782,0,0,0.448788222048861,0.108647371922008,0,0.0915975934018623,1.06606955203727,5.10966490978682,4.55242743545572,5.15256213890485,1.1279783030859,2.54881294613061,2.3495022176618,1.13852239634511,5.88065342227401,1.26598838716816,0,0.989471500037586,0,0.995261931078505,0.265372693510018,0,2.37216902944498,2.59484271787656,3.13265848516366,1.7524294574976,0,1.87411556580271,0,0.978323094660449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| ||
|short_description=p2@PRKCQ | |short_description=p2@PRKCQ | ||
}} | }} |
Latest revision as of 21:20, 18 September 2015
Short description: | p2@PRKCQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PRKCQ_5end |
Coexpression cluster: | C18_CD4_CD8_thymus_Whole_Peripheral_Natural_blood |
Association with transcript: | -33bp_to_ENST00000263125_5end |
EntrezGene: | PRKCQ |
HGNC: | 9410 |
UniProt: | Q04759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 4.22e-22 | 18 |
alpha-beta T cell | 4.22e-22 | 18 |
immature T cell | 4.22e-22 | 18 |
mature T cell | 4.22e-22 | 18 |
immature alpha-beta T cell | 4.22e-22 | 18 |
T cell | 2.55e-21 | 25 |
pro-T cell | 2.55e-21 | 25 |
CD8-positive, alpha-beta T cell | 3.75e-14 | 11 |
lymphoid lineage restricted progenitor cell | 5.88e-14 | 52 |
lymphocyte | 1.69e-13 | 53 |
common lymphoid progenitor | 1.69e-13 | 53 |
hematopoietic cell | 4.28e-12 | 177 |
hematopoietic stem cell | 6.42e-12 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-10 | 161 |
CD4-positive, alpha-beta T cell | 1.15e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
blood | 6.54e-15 | 15 |
haemolymphatic fluid | 6.54e-15 | 15 |
organism substance | 6.54e-15 | 15 |
Ontology term | p-value | n |
---|---|---|
leukemia | 6.19e-15 | 39 |
myeloid leukemia | 2.68e-14 | 31 |
hematologic cancer | 4.71e-12 | 51 |
immune system cancer | 4.71e-12 | 51 |
chronic leukemia | 1.04e-07 | 8 |