FFCP PHASE1:Hg19::chr14:106330458..106330479,-: Difference between revisions
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m (moved FFCP PHASE1 hg19::chr14:106330458..106330479,- to FFCP PHASE1:Hg19::chr14:106330458..106330479,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5538 | |HGNC=5538 | ||
|TSSclassifier=strong | |||
|UniProt=P01857 | |UniProt=P01857 | ||
|association_with_transcript=0bp_to_ENST00000461719,uc001yrs.2,uc001yrx.1,uc001yrz.1,uc001yse.2,uc001ysm.1_5end | |||
|cluster_id=chr14:106330458..106330479,- | |||
|coexpression_cluster_id=C282 | |||
|description=CAGE_peak_1_at_IGHJ4_5end | |||
|id=chr14:106330458..106330479,- | |||
|ontology_enrichment_celltype=CL:0000945!1.06e-38!24;CL:0000826!1.06e-38!24;CL:0000236!2.17e-30!14;CL:0000542!3.11e-16!53;CL:0000051!3.11e-16!53;CL:0000838!8.74e-15!52;CL:0002087!2.64e-08!119;CL:0000738!3.93e-08!140;CL:0000784!5.82e-08!3;CL:0000037!9.69e-08!172;CL:0000566!9.69e-08!172;CL:0000842!2.17e-07!3;CL:0000988!6.79e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000236;5.39e-49;13!CL:0000945;3.86e-41;24!CL:0000542;4.93e-14;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,2.42e-45,14;CL:0000945,3.21e-41,24;CL:0000826,3.21e-41,24;CL:0000542,8.53e-20,53;CL:0000051,8.53e-20,53;CL:0000838,2.11e-17,52;CL:0002087,1.89e-08,115;CL:0002031,8.06e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.93e-14;53!UBERON:0004872;2.24e-07;7!UBERON:0001045;4.58e-07;1!UBERON:0008801;5.91e-07;1!UBERON:0006298;7.39e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:12603;4.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,4.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.57e-24!115;UBERON:0000178!9.61e-12!15;UBERON:0000179!9.61e-12!15;UBERON:0000463!9.61e-12!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;3.75e-12;2!UBERON:0001044;9.97e-09;6!UBERON:0003293;9.97e-09;6!UBERON:0003294;9.97e-09;6!UBERON:0010047;9.97e-09;6!UBERON:0003408;9.97e-09;6!UBERON:0000167;9.97e-09;6!UBERON:0002106;5.44e-08;3!UBERON:0004921;6.30e-08;33!UBERON:0000029;4.33e-07;1!UBERON:0001154;4.58e-07;1!UBERON:0001153;4.58e-07;1!UBERON:0009854;4.58e-07;1!UBERON:0001831;5.91e-07;1!UBERON:0001567;5.91e-07;1!UBERON:0001736;7.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.11e-15,114;UBERON:0001829,4.19e-12,2;UBERON:0001044,1.04e-08,6;UBERON:0003293,1.04e-08,6;UBERON:0003294,1.04e-08,6;UBERON:0010047,1.04e-08,6;UBERON:0000167,1.04e-08,6;UBERON:0002106,4.72e-08,3;UBERON:0004854,4.72e-08,3;UBERON:0009034,4.72e-08,3;UBERON:0002095,4.72e-08,3;UBERON:0004782,4.72e-08,3;UBERON:0003281,4.72e-08,3;UBERON:0009664,4.72e-08,3;UBERON:0002296,4.72e-08,3;UBERON:0005602,4.72e-08,3;UBERON:0001179,4.72e-08,3;UBERON:0006293,4.72e-08,3;UBERON:0000029,4.33e-07,1;UBERON:0001154,4.58e-07,1;UBERON:0001153,4.58e-07,1;UBERON:0001045,4.58e-07,1;UBERON:0001831,5.75e-07,1;UBERON:0001567,5.75e-07,1;UBERON:0008801,5.75e-07,1;UBERON:0001736,8.49e-07,1;UBERON:0006298,8.49e-07,1;UBERON:0002372,9.48e-07,1;UBERON:0001961,9.48e-07,1;UBERON:0001744,9.48e-07,1;UBERON:0001735,9.48e-07,1 | |||
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| ||
|short_description=p1@IGHJ4 | |||
}} | }} |
Latest revision as of 21:13, 18 September 2015
Short description: | p1@IGHJ4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHJ4_5end |
Coexpression cluster: | C282_acute_B_tonsil_CD19_submaxillary_lymph_throat |
Association with transcript: | 0bp_to_ENST00000461719, uc001yrs.2, uc001yrx.1, uc001yrz.1, uc001yse.2, uc001ysm.1_5end |
EntrezGene: | NA |
HGNC: | 5538 |
UniProt: | P01857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 2.42e-45 | 14 |
lymphocyte of B lineage | 3.21e-41 | 24 |
pro-B cell | 3.21e-41 | 24 |
lymphocyte | 8.53e-20 | 53 |
common lymphoid progenitor | 8.53e-20 | 53 |
lymphoid lineage restricted progenitor cell | 2.11e-17 | 52 |
nongranular leukocyte | 1.89e-08 | 115 |
hematopoietic lineage restricted progenitor cell | 8.06e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.11e-15 | 114 |
major salivary gland | 4.19e-12 | 2 |
saliva-secreting gland | 1.04e-08 | 6 |
gland of oral region | 1.04e-08 | 6 |
gland of foregut | 1.04e-08 | 6 |
oral gland | 1.04e-08 | 6 |
oral cavity | 1.04e-08 | 6 |
spleen | 4.72e-08 | 3 |
gastrointestinal system mesentery | 4.72e-08 | 3 |
stomach region | 4.72e-08 | 3 |
mesentery | 4.72e-08 | 3 |
gastrointestinal system serosa | 4.72e-08 | 3 |
mesentery of stomach | 4.72e-08 | 3 |
gut mesentery | 4.72e-08 | 3 |
dorsal mesentery | 4.72e-08 | 3 |
dorsal mesogastrium | 4.72e-08 | 3 |
peritoneal cavity | 4.72e-08 | 3 |
spleen primordium | 4.72e-08 | 3 |
lymph node | 4.33e-07 | 1 |
vermiform appendix | 4.58e-07 | 1 |
caecum | 4.58e-07 | 1 |
midgut | 4.58e-07 | 1 |
parotid gland | 5.75e-07 | 1 |
cheek | 5.75e-07 | 1 |
parotid gland primordium | 5.75e-07 | 1 |
submandibular gland | 8.49e-07 | 1 |
submandibular gland primordium | 8.49e-07 | 1 |
tonsil | 9.48e-07 | 1 |
mucosa-associated lymphoid tissue | 9.48e-07 | 1 |
lymphoid tissue | 9.48e-07 | 1 |
tonsillar ring | 9.48e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 4.09e-07 | 1 |