FFCP PHASE1:Hg19::chr14:106328158..106328168,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3507 | |EntrezGene=3507 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=5541 | |HGNC=5541 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_X58529_5end | |association_with_transcript=0bp_to_X58529_5end | ||
|cluster_id=chr14:106328158..106328168,- | |||
|coexpression_cluster_id=C2115 | |||
|description=CAGE_peak_6_at_IGHM_5end | |description=CAGE_peak_6_at_IGHM_5end | ||
|id=chr14:106328158..106328168,- | |id=chr14:106328158..106328168,- | ||
|ontology_enrichment_celltype=CL:0000945!3.36e-75!24;CL:0000826!3.36e-75!24;CL:0000542!5.12e-43!53;CL:0000051!5.12e-43!53;CL:0000236!3.81e-42!14;CL:0000838!2.23e-40!52;CL:0002087!2.04e-16!119;CL:0002031!4.39e-14!124;CL:0000738!6.36e-13!140;CL:0000037!3.50e-12!172;CL:0000566!3.50e-12!172;CL:0002032!6.10e-12!165;CL:0000837!6.10e-12!165;CL:0000817!2.91e-11!3;CL:0000988!4.19e-11!182;CL:0000785!2.75e-08!2;CL:0000955!2.75e-08!2;CL:0000818!2.75e-08!2;CL:0000954!2.75e-08!2;CL:0000816!2.75e-08!2 | |ontology_enrichment_celltype=CL:0000945!3.36e-75!24;CL:0000826!3.36e-75!24;CL:0000542!5.12e-43!53;CL:0000051!5.12e-43!53;CL:0000236!3.81e-42!14;CL:0000838!2.23e-40!52;CL:0002087!2.04e-16!119;CL:0002031!4.39e-14!124;CL:0000738!6.36e-13!140;CL:0000037!3.50e-12!172;CL:0000566!3.50e-12!172;CL:0002032!6.10e-12!165;CL:0000837!6.10e-12!165;CL:0000817!2.91e-11!3;CL:0000988!4.19e-11!182;CL:0000785!2.75e-08!2;CL:0000955!2.75e-08!2;CL:0000818!2.75e-08!2;CL:0000954!2.75e-08!2;CL:0000816!2.75e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.13e-111;24!CL:0000236;1.88e-86;13!CL:0000542;4.85e-38;53!CL:0000785;1.05e-10;1!CL:0000819;1.05e-10;1!CL:0002032;1.54e-10;1!CL:0000557;1.54e-10;1!CL:0002087;3.63e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,9.89e-112,24;CL:0000826,9.89e-112,24;CL:0000236,3.67e-80,14;CL:0000542,1.29e-55,53;CL:0000051,1.29e-55,53;CL:0000838,2.60e-50,52;CL:0002087,5.22e-24,115;CL:0002031,3.52e-20,120;CL:0000738,6.46e-20,136;CL:0002032,1.68e-18,161;CL:0000837,1.68e-18,161;CL:0000037,1.28e-17,168;CL:0000988,1.39e-16,177;CL:0000819,1.21e-10,1;CL:0000134,7.86e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;4.85e-38;53 | |||
|ontology_enrichment_disease=DOID:0060058!4.94e-16!10;DOID:2531!2.93e-07!51;DOID:0060083!2.93e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:12603;2.66e-11;1!DOID:4960;3.24e-11;1!DOID:0070004;3.24e-11;1!DOID:0060073;1.05e-10;1!DOID:8675;1.05e-10;1 | |||
|ontology_enrichment_disease_v019_2=DOID:12603,2.79e-11,1;DOID:4960,3.08e-11,1;DOID:0070004,3.08e-11,1;DOID:0060073,1.21e-10,1;DOID:8675,1.21e-10,1 | |||
|ontology_enrichment_uberon=UBERON:0004177!7.63e-12!7;UBERON:0002106!3.01e-11!3;UBERON:0004854!3.01e-11!3;UBERON:0009034!3.01e-11!3;UBERON:0002095!3.01e-11!3;UBERON:0004782!3.01e-11!3;UBERON:0003281!3.01e-11!3;UBERON:0009664!3.01e-11!3;UBERON:0002296!3.01e-11!3;UBERON:0005602!3.01e-11!3;UBERON:0001179!3.01e-11!3;UBERON:0006293!3.01e-11!3;UBERON:0001829!5.21e-08!2;UBERON:0007023!9.73e-07!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p6@IGHM | |short_description=p6@IGHM | ||
}} | }} |
Latest revision as of 21:07, 18 September 2015
Short description: | p6@IGHM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_IGHM_5end |
Coexpression cluster: | C2115_b_myeloma_CD19_acute_non_xeroderma_Burkitt |
Association with transcript: | 0bp_to_X58529_5end |
EntrezGene: | IGHM |
HGNC: | 5541 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 9.89e-112 | 24 |
pro-B cell | 9.89e-112 | 24 |
B cell | 3.67e-80 | 14 |
lymphocyte | 1.29e-55 | 53 |
common lymphoid progenitor | 1.29e-55 | 53 |
lymphoid lineage restricted progenitor cell | 2.60e-50 | 52 |
nongranular leukocyte | 5.22e-24 | 115 |
hematopoietic lineage restricted progenitor cell | 3.52e-20 | 120 |
leukocyte | 6.46e-20 | 136 |
hematopoietic oligopotent progenitor cell | 1.68e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.68e-18 | 161 |
hematopoietic stem cell | 1.28e-17 | 168 |
hematopoietic cell | 1.39e-16 | 177 |
B-1 B cell | 1.21e-10 | 1 |
mesenchymal cell | 7.86e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
acute leukemia | 2.79e-11 | 1 |
bone marrow cancer | 3.08e-11 | 1 |
myeloma | 3.08e-11 | 1 |
lymphatic system cancer | 1.21e-10 | 1 |
lymphosarcoma | 1.21e-10 | 1 |