FFCP PHASE1:Hg19::chr10:6557469..6557474,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5588 | |EntrezGene=5588 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=9410 | |HGNC=9410 | ||
|TSSclassifier=strong | |||
|UniProt=Q04759 | |UniProt=Q04759 | ||
|association_with_transcript=-189bp_to_uc001iji.1_5end | |association_with_transcript=-189bp_to_uc001iji.1_5end | ||
|cluster_id=chr10:6557469..6557474,- | |||
|coexpression_cluster_id=C72 | |coexpression_cluster_id=C72 | ||
|description=CAGE_peak_4_at_PRKCQ_5end | |description=CAGE_peak_4_at_PRKCQ_5end | ||
|id=chr10:6557469..6557474,- | |id=chr10:6557469..6557474,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0004874;3.76e-13;1!UBERON:0008814;2.28e-07;2!UBERON:0010056;2.28e-07;2!UBERON:0007297;4.17e-07;2!UBERON:0006965;5.28e-07;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001630!3.28e-14!2;UBERON:0005090!3.28e-14!2;UBERON:0000341!3.50e-14!2;UBERON:0003127!1.19e-13!2;UBERON:0007023!2.38e-12!115;UBERON:0001723!7.69e-10!3;UBERON:0001033!7.69e-10!3;UBERON:0010056!7.69e-10!3;UBERON:0000078!1.04e-08!18;UBERON:0002426!5.58e-08!1;UBERON:0003831!5.58e-08!1;UBERON:0003898!5.58e-08!1;UBERON:0004830!5.58e-08!1;UBERON:0001774!5.58e-08!1;UBERON:0003830!5.58e-08!1;UBERON:0005175!5.58e-08!1;UBERON:0003897!5.58e-08!1;UBERON:0001103!5.58e-08!1;UBERON:0010084!5.58e-08!1;UBERON:0005418!6.37e-08!1;UBERON:0001389!6.37e-08!1;UBERON:0000026!6.37e-08!1;UBERON:0008784!6.37e-08!1;UBERON:0006058!6.37e-08!1;UBERON:0003663!6.37e-08!1;UBERON:0001383!6.37e-08!1;UBERON:0004256!6.37e-08!1;UBERON:0002529!6.37e-08!1;UBERON:0004708!6.37e-08!1;UBERON:0002101!6.37e-08!1;UBERON:0004709!6.37e-08!1;UBERON:0003661!6.37e-08!1;UBERON:0002471!6.37e-08!1;UBERON:0004357!6.37e-08!1;UBERON:0009872!6.37e-08!1;UBERON:0004347!6.37e-08!1;UBERON:0005420!6.37e-08!1;UBERON:0005732!6.37e-08!1;UBERON:0006057!6.37e-08!1;UBERON:0000978!6.37e-08!1;UBERON:0002103!6.37e-08!1;UBERON:0001665!6.37e-08!1;UBERON:0003823!6.37e-08!1;UBERON:0000154!6.37e-08!1;UBERON:0005733!6.37e-08!1;UBERON:0005730!6.37e-08!1;UBERON:0000989!6.80e-08!1;UBERON:0008811!6.80e-08!1;UBERON:0006258!6.80e-08!1;UBERON:0005876!6.80e-08!1;UBERON:0004874!6.80e-08!1;UBERON:0007029!7.76e-08!1;UBERON:0001301!9.44e-08!1;UBERON:0002372!1.07e-07!1;UBERON:0001961!1.07e-07!1;UBERON:0001744!1.07e-07!1;UBERON:0001735!1.07e-07!1;UBERON:0001736!1.58e-07!1;UBERON:0006298!1.58e-07!1;UBERON:0000166!1.99e-07!21;UBERON:0008814!4.70e-07!15 | |ontology_enrichment_uberon=UBERON:0001630!3.28e-14!2;UBERON:0005090!3.28e-14!2;UBERON:0000341!3.50e-14!2;UBERON:0003127!1.19e-13!2;UBERON:0007023!2.38e-12!115;UBERON:0001723!7.69e-10!3;UBERON:0001033!7.69e-10!3;UBERON:0010056!7.69e-10!3;UBERON:0000078!1.04e-08!18;UBERON:0002426!5.58e-08!1;UBERON:0003831!5.58e-08!1;UBERON:0003898!5.58e-08!1;UBERON:0004830!5.58e-08!1;UBERON:0001774!5.58e-08!1;UBERON:0003830!5.58e-08!1;UBERON:0005175!5.58e-08!1;UBERON:0003897!5.58e-08!1;UBERON:0001103!5.58e-08!1;UBERON:0010084!5.58e-08!1;UBERON:0005418!6.37e-08!1;UBERON:0001389!6.37e-08!1;UBERON:0000026!6.37e-08!1;UBERON:0008784!6.37e-08!1;UBERON:0006058!6.37e-08!1;UBERON:0003663!6.37e-08!1;UBERON:0001383!6.37e-08!1;UBERON:0004256!6.37e-08!1;UBERON:0002529!6.37e-08!1;UBERON:0004708!6.37e-08!1;UBERON:0002101!6.37e-08!1;UBERON:0004709!6.37e-08!1;UBERON:0003661!6.37e-08!1;UBERON:0002471!6.37e-08!1;UBERON:0004357!6.37e-08!1;UBERON:0009872!6.37e-08!1;UBERON:0004347!6.37e-08!1;UBERON:0005420!6.37e-08!1;UBERON:0005732!6.37e-08!1;UBERON:0006057!6.37e-08!1;UBERON:0000978!6.37e-08!1;UBERON:0002103!6.37e-08!1;UBERON:0001665!6.37e-08!1;UBERON:0003823!6.37e-08!1;UBERON:0000154!6.37e-08!1;UBERON:0005733!6.37e-08!1;UBERON:0005730!6.37e-08!1;UBERON:0000989!6.80e-08!1;UBERON:0008811!6.80e-08!1;UBERON:0006258!6.80e-08!1;UBERON:0005876!6.80e-08!1;UBERON:0004874!6.80e-08!1;UBERON:0007029!7.76e-08!1;UBERON:0001301!9.44e-08!1;UBERON:0002372!1.07e-07!1;UBERON:0001961!1.07e-07!1;UBERON:0001744!1.07e-07!1;UBERON:0001735!1.07e-07!1;UBERON:0001736!1.58e-07!1;UBERON:0006298!1.58e-07!1;UBERON:0000166!1.99e-07!21;UBERON:0008814!4.70e-07!15 | ||
|ontology_enrichment_uberon_v019=UBERON:0000341;1.08e-24;2!UBERON:0005090;1.08e-24;2!UBERON:0001630;1.08e-24;2!UBERON:0001723;5.52e-17;3!UBERON:0001033;5.52e-17;3!UBERON:0002426;2.78e-13;1!UBERON:0003831;2.78e-13;1!UBERON:0003898;2.78e-13;1!UBERON:0004830;2.78e-13;1!UBERON:0003830;2.78e-13;1!UBERON:0005175;2.78e-13;1!UBERON:0001774;2.78e-13;1!UBERON:0001103;2.78e-13;1!UBERON:0001389;3.33e-13;1!UBERON:0000026;3.33e-13;1!UBERON:0008784;3.33e-13;1!UBERON:0006058;3.33e-13;1!UBERON:0003663;3.33e-13;1!UBERON:0004256;3.33e-13;1!UBERON:0004708;3.33e-13;1!UBERON:0002101;3.33e-13;1!UBERON:0004709;3.33e-13;1!UBERON:0002529;3.33e-13;1!UBERON:0010538;3.33e-13;1!UBERON:0003661;3.33e-13;1!UBERON:0010890;3.33e-13;1!UBERON:0002471;3.33e-13;1!UBERON:0001383;3.33e-13;1!UBERON:0010758;3.33e-13;1!UBERON:0010707;3.33e-13;1!UBERON:0000978;3.33e-13;1!UBERON:0002103;3.33e-13;1!UBERON:0001665;3.33e-13;1!UBERON:0003823;3.33e-13;1!UBERON:0000154;3.33e-13;1!UBERON:0010709;3.33e-13;1!UBERON:0000989;3.76e-13;1!UBERON:0008811;3.76e-13;1!UBERON:0007029;6.06e-13;1!UBERON:0001301;6.06e-13;1!UBERON:0002372;9.73e-13;1!UBERON:0001961;9.73e-13;1!UBERON:0001744;9.73e-13;1!UBERON:0001042;9.73e-13;1!UBERON:0001735;9.73e-13;1!UBERON:0001134;3.06e-12;16!UBERON:0002036;3.06e-12;16!UBERON:0000974;7.19e-09;6!UBERON:0000922;4.01e-07;49!UBERON:0003127;4.17e-07;2!UBERON:0006562;5.28e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005090,1.02e-24,2;UBERON:0001630,1.02e-24,2;UBERON:0000341,1.15e-24,2;UBERON:0001723,5.75e-17,3;UBERON:0001033,5.75e-17,3;UBERON:0010056,5.75e-17,3;UBERON:0002426,2.62e-13,1;UBERON:0003831,2.62e-13,1;UBERON:0003898,2.62e-13,1;UBERON:0004830,2.62e-13,1;UBERON:0003830,2.62e-13,1;UBERON:0005175,2.62e-13,1;UBERON:0001774,2.62e-13,1;UBERON:0001103,2.62e-13,1;UBERON:0010084,2.62e-13,1;UBERON:0005418,3.33e-13,1;UBERON:0001389,3.33e-13,1;UBERON:0000026,3.33e-13,1;UBERON:0008784,3.33e-13,1;UBERON:0006058,3.33e-13,1;UBERON:0003663,3.33e-13,1;UBERON:0004256,3.33e-13,1;UBERON:0004708,3.33e-13,1;UBERON:0002101,3.33e-13,1;UBERON:0004709,3.33e-13,1;UBERON:0002529,3.33e-13,1;UBERON:0010538,3.33e-13,1;UBERON:0003661,3.33e-13,1;UBERON:0010890,3.33e-13,1;UBERON:0002471,3.33e-13,1;UBERON:0001383,3.33e-13,1;UBERON:0004357,3.33e-13,1;UBERON:0004347,3.33e-13,1;UBERON:0005420,3.33e-13,1;UBERON:0005732,3.33e-13,1;UBERON:0010758,3.33e-13,1;UBERON:0010707,3.33e-13,1;UBERON:0000978,3.33e-13,1;UBERON:0002103,3.33e-13,1;UBERON:0001665,3.33e-13,1;UBERON:0003823,3.33e-13,1;UBERON:0000154,3.33e-13,1;UBERON:0010709,3.33e-13,1;UBERON:0005733,3.33e-13,1;UBERON:0005730,3.33e-13,1;UBERON:0000989,3.76e-13,1;UBERON:0008811,3.76e-13,1;UBERON:0006258,3.76e-13,1;UBERON:0005876,3.76e-13,1;UBERON:0004874,3.76e-13,1;UBERON:0007029,4.77e-13,1;UBERON:0001301,6.82e-13,1;UBERON:0002372,8.64e-13,1;UBERON:0001961,8.64e-13,1;UBERON:0001744,8.64e-13,1;UBERON:0001735,8.64e-13,1;UBERON:0001042,3.15e-11,10;UBERON:0009145,3.15e-11,10;UBERON:0006562,2.94e-10,11;UBERON:0007023,2.92e-07,114;UBERON:0003127,4.17e-07,2 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6438200040794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.872901148395775,0,2.03382666702479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9318012110073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,12.9485767437579,56.8751949983608,18.5570309014112,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,18.1248884615834,4.28515976634733,0,0,0,0.700118741059814,1.21270313374932,30.2626279576776,13.0048654412407,1.54909721933551,0.573777643141411,2.32862249582209,0,0,0,0,0,0,0,0,1.20764276154616,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0,0,0,2.78365540616599,0,0,0,0,0,0,0,0,0,0,0,0.19924798825107,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,13.6438200040794,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.27144668714639,0,0,0,0,0.872901148395775,0,2.03382666702479,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.9318012110073,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0.173858272302579,0,0,0,0,0.430227358820278,0,0,0,0,0,0,0,0,0,12.9485767437579,56.8751949983608,18.5570309014112,2.91426595835484,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0,0,0,18.1248884615834,4.28515976634733,0,0,0,0.700118741059814,1.21270313374932,30.2626279576776,13.0048654412407,1.54909721933551,0.573777643141411,2.32862249582209,0,0,0,0,0,0,0,0,1.20764276154616,0 | ||
|short_description=p4@PRKCQ | |short_description=p4@PRKCQ | ||
}} | }} |
Latest revision as of 21:04, 18 September 2015
Short description: | p4@PRKCQ |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_PRKCQ_5end |
Coexpression cluster: | C72_skeletal_tongue_throat_heart_diaphragm_penis_left |
Association with transcript: | -189bp_to_uc001iji.1_5end |
EntrezGene: | PRKCQ |
HGNC: | 9410 |
UniProt: | Q04759 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data