FFCP PHASE1:Hg19::chr12:52401484..52401505,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=692159 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=32680 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=-45bp_to_BC028005_5end | |||
|cluster_id=chr12:52401484..52401505,- | |||
|coexpression_cluster_id=C325 | |||
|description=CAGE_peak_1_at_GRASPOS_5end | |||
|id=chr12:52401484..52401505,- | |||
|ontology_enrichment_celltype=CL:0000738!2.28e-42!140;CL:0000037!2.58e-31!172;CL:0000566!2.58e-31!172;CL:0002031!3.43e-31!124;CL:0002057!1.10e-28!42;CL:0000766!2.12e-28!76;CL:0000988!2.43e-28!182;CL:0002087!5.54e-28!119;CL:0002032!3.12e-26!165;CL:0000837!3.12e-26!165;CL:0000860!4.59e-26!45;CL:0000557!7.06e-23!71;CL:0000839!1.81e-20!70;CL:0002009!2.20e-18!65;CL:0000763!6.82e-17!112;CL:0000049!6.82e-17!112;CL:0002194!1.47e-16!63;CL:0000576!1.47e-16!63;CL:0000040!1.47e-16!63;CL:0000559!1.47e-16!63;CL:0002393!2.77e-15!9;CL:0002397!2.77e-15!9;CL:0000094!8.82e-10!8;CL:0000838!3.06e-09!52;CL:0000542!5.99e-09!53;CL:0000051!5.99e-09!53;CL:0000791!1.63e-08!18;CL:0000789!1.63e-08!18;CL:0002420!1.63e-08!18;CL:0002419!1.63e-08!18;CL:0000790!1.63e-08!18;CL:0002274!2.17e-08!5;CL:0000457!2.17e-08!5;CL:0002191!2.17e-08!5;CL:0000097!2.17e-08!5;CL:0000831!2.17e-08!5;CL:0002028!2.17e-08!5;CL:0000625!5.13e-08!11 | |||
|ontology_enrichment_celltype_v019=CL:0002393;2.11e-26;6!CL:0002397;2.11e-26;6!CL:0000766;5.53e-17;69!CL:0000576;3.01e-16;48!CL:0000623;1.89e-14;3!CL:0002087;3.93e-14;104!CL:0000226;5.58e-14;3!CL:0000842;5.58e-14;3!CL:0000875;1.07e-13;3!CL:0002396;1.07e-13;3!CL:0000771;1.79e-10;2!CL:0000738;2.37e-10;136!CL:0000860;9.20e-10;33!CL:0002057;9.20e-10;33!CL:0000097;5.38e-09;5!CL:0000542;4.76e-08;53!CL:0000236;6.76e-08;13!CL:0000791;7.66e-08;18!CL:0000789;7.66e-08;18!CL:0002419;7.66e-08;18!CL:0000473;2.01e-07;39!CL:0000234;2.01e-07;39!CL:0000988;2.10e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,3.53e-50,136;CL:0002087,4.08e-40,115;CL:0000037,4.85e-39,168;CL:0002393,2.60e-38,9;CL:0002397,2.60e-38,9;CL:0002031,2.67e-38,120;CL:0000988,1.25e-36,177;CL:0002032,1.68e-32,161;CL:0000837,1.68e-32,161;CL:0000860,3.59e-32,42;CL:0002057,3.59e-32,42;CL:0000766,2.45e-31,72;CL:0000473,1.40e-27,48;CL:0000234,1.40e-27,48;CL:0000839,6.30e-26,66;CL:0000557,1.81e-25,67;CL:0002194,3.71e-21,59;CL:0000576,3.71e-21,59;CL:0000040,3.71e-21,59;CL:0000559,3.71e-21,59;CL:0002009,2.49e-20,61;CL:0000763,5.31e-19,108;CL:0000049,5.31e-19,108;CL:0000623,1.94e-14,3;CL:0000825,1.94e-14,3;CL:0000226,3.94e-14,3;CL:0000842,3.94e-14,3;CL:0000134,5.71e-14,354;CL:0002320,1.58e-13,361;CL:0000875,1.66e-13,3;CL:0002396,1.66e-13,3;CL:0000838,5.18e-13,52;CL:0000542,1.04e-12,53;CL:0000051,1.04e-12,53;CL:0000219,5.76e-12,386;CL:0000771,1.93e-10,2;CL:0000048,4.69e-10,427;CL:0000723,8.60e-10,433;CL:0000034,1.88e-09,441;CL:0000097,5.25e-09,5;CL:0002028,5.25e-09,5;CL:0000791,7.58e-08,18;CL:0000789,7.58e-08,18;CL:0002420,7.58e-08,18;CL:0002419,7.58e-08,18;CL:0000790,7.58e-08,18;CL:0000236,2.26e-07,14 | |||
|ontology_enrichment_development_v019=CL:0002057;7.56e-21;42!CL:0000051;4.76e-08;53!CL:0000790;7.66e-08;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.74e-24!102;UBERON:0003061!3.74e-24!102;UBERON:0002193!1.28e-22!112;UBERON:0002371!3.90e-20!80;UBERON:0001474!7.07e-18!86;UBERON:0002405!8.67e-16!115;UBERON:0004765!2.55e-14!101;UBERON:0001434!2.55e-14!101;UBERON:0007023!3.49e-09!115;UBERON:0003081!6.05e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.85e-23,98;UBERON:0003061,1.85e-23,98;UBERON:0002371,7.16e-22,76;UBERON:0002193,9.72e-21,108;UBERON:0001474,6.56e-20,82;UBERON:0004765,1.07e-17,90;UBERON:0002405,5.74e-17,93;UBERON:0001434,1.97e-15,100;UBERON:0002384,6.37e-13,371;UBERON:0003081,2.68e-08,203;UBERON:0002204,2.67e-07,167 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.767658796194425,0.77408061658038,0,0,0,0,0,0.293600439334847,8.30993112797816,7.42014455639524,6.94434786290726,0,0,0,0.290796477559129,0.755751887377619,0,0.232429036905685,0,1.23882548358041,0,0.256160706529101,0.236482229888585,1.03423704220986,1.93645405075148,0,0.752969358170419,0.272906150057846,0.674170453335254,1.53041946185451,2.24650318953266,0,0,0.199463657621632,0,1.45104619314292,1.70215567407342,0,0.251248665256743,0,0,0,1.47311054395026,0.316462387440884,1.26753171787165,2.97646019951061,1.88692780957538,0.898629049171961,1.80212271409808,1.12507910687956,2.28010194992999,2.78483348078726,1.0959849225878,0,0,0.889509253863555,0.426730222566507,1.20118796110804,0.574752439954483,0,1.90810750907073,1.70763890732835,2.93618594685469,1.52909291250092,0,0,0,0.983548850569165,1.96505381374582,1.02800749499755,0,0,1.4203434172042,0,0,0,0.443067789167242,0,0,0.130059347559878,0,0.276350017785848,0,0.444859689486181,0.267540828089713,2.09071047609954,0.226618685395132,0,0.34362744548263,0,0,1.30216690771284,0.950452044448374,0.150575119077773,0.127986611154418,0,0,0.821127996921047,2.01606743224732,1.60464117470104,1.73789284659359,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.476981248610684,0.571994910780128,1.48583000531826,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.58902087180316,11.6334079244498,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0.088048434013226,6.63449969730471,11.9619561336078,4.92345490362882,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0.142977993658148,0.542621605391443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.13764596424047,4.9594342217689,4.10697716095195,0,0,0,0,0,2.99602809578873,0,0.828831026872071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.10152039184331,5.60856922128404,1.81436848265855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.822724546172388,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0,0.140669416410513,0,0,0,0.398495976502139,0.828851746593443,0,0,0,0,0,0,0,0.197286811273867,2.3948309234694,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.361789315876224,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.279282401272254,0.229160424011684,0,0,0,0.223171457441873,0,0,0,0,0,0,0,0,0,0,0,0,0,0.899895566206002,0.77380195455795,0.0607495566580247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.13223260174269,0,0,0.747511887973863,0.314408610199332,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0,0,0,0,0.18628920882415,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.265841714557995,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.345430341731199,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788617450012534,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.0675375846183947,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0.157115589916002,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.187967835959707,0.515663103788617,0,0,0,0,0,0,0.143339583151451,0,0.0679914901909147,0,0,0,0,0,0,0,0,0,0,0,0,0.151557396436479,0.267964130156178,0,0,0,0,0.0645889098360061,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0.332660356546013,0,0,0,0,0,0.122241444182866,0,0.665756774185513,0,0 | |||
|short_description=p1@GRASPOS | |||
}} |
Latest revision as of 20:53, 18 September 2015
Short description: | p1@GRASPOS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_GRASPOS_5end |
Coexpression cluster: | C325_Mast_Eosinophils_CD14_immature_Basophils_granulocyte_Natural |
Association with transcript: | -45bp_to_BC028005_5end |
EntrezGene: | GRASPOS |
HGNC: | 32680 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.85e-23 | 98 |
blood island | 1.85e-23 | 98 |
bone marrow | 7.16e-22 | 76 |
hemolymphoid system | 9.72e-21 | 108 |
bone element | 6.56e-20 | 82 |
skeletal element | 1.07e-17 | 90 |
immune system | 5.74e-17 | 93 |
skeletal system | 1.97e-15 | 100 |
connective tissue | 6.37e-13 | 371 |
lateral plate mesoderm | 2.68e-08 | 203 |
musculoskeletal system | 2.67e-07 | 167 |