FFCP PHASE1:Hg19::chr15:71055773..71055791,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr15:71055773..71055791,-
|short_description=p4@UACA
|description=CAGE_peak_4_at_UACA_5end
|association_with_transcript=-4bp_to_ENST00000539319_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=55075 | |EntrezGene=55075 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15947 | |HGNC=15947 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2B9 | |UniProt=F5H2B9 | ||
|association_with_transcript=-4bp_to_ENST00000539319_5end | |||
|cluster_id=chr15:71055773..71055791,- | |||
|description=CAGE_peak_4_at_UACA_5end | |||
|id=chr15:71055773..71055791,- | |||
|ontology_enrichment_celltype=CL:0000055!5.73e-14!180;CL:0000057!8.85e-10!75;CL:0000680!2.93e-08!57;CL:0000056!2.93e-08!57;CL:0000355!2.93e-08!57;CL:0002334!2.01e-07!12;CL:0000183!3.32e-07!59;CL:0000187!3.78e-07!54 | |||
|ontology_enrichment_celltype_v019=CL:0002334;1.76e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,6.39e-10,76;CL:0002334,8.73e-09,12;CL:0000680,4.87e-07,58;CL:0000056,4.87e-07,58;CL:0000355,4.87e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003104!4.04e-15!238;UBERON:0009142!4.04e-15!238;UBERON:0002100!5.26e-14!216;UBERON:0000475!5.23e-13!365;UBERON:0000481!3.73e-12!347;UBERON:0000468!4.80e-11!659;UBERON:0005256!4.37e-10!143;UBERON:0000914!4.48e-10!83;UBERON:0002329!4.48e-10!83;UBERON:0003077!4.48e-10!83;UBERON:0003059!4.48e-10!83;UBERON:0007282!4.48e-10!83;UBERON:0009618!4.48e-10!83;UBERON:0007285!4.48e-10!83;UBERON:0001134!6.15e-10!61;UBERON:0002036!6.15e-10!61;UBERON:0003082!6.15e-10!61;UBERON:0002385!1.06e-09!63;UBERON:0001015!1.06e-09!63;UBERON:0000383!1.06e-09!63;UBERON:0000490!1.31e-09!138;UBERON:0004290!7.55e-09!70;UBERON:0001007!1.02e-08!155;UBERON:0001555!1.02e-08!155;UBERON:0007026!1.02e-08!155;UBERON:0004119!8.66e-08!169;UBERON:0000925!8.66e-08!169;UBERON:0006595!8.66e-08!169;UBERON:0000486!1.12e-07!82;UBERON:0000467!4.18e-07!625;UBERON:0005156!4.59e-07!59;UBERON:0000990!4.59e-07!59;UBERON:0000480!6.27e-07!626;UBERON:0000926!7.93e-07!448;UBERON:0004120!7.93e-07!448;UBERON:0006603!7.93e-07!448;UBERON:0001048!9.87e-07!168 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002100,2.55e-09,199;UBERON:0001134,7.84e-09,62;UBERON:0002036,7.84e-09,62;UBERON:0003082,7.84e-09,62;UBERON:0002385,8.46e-09,64;UBERON:0001015,8.46e-09,64;UBERON:0000383,8.46e-09,64;UBERON:0003104,1.75e-08,160;UBERON:0009142,1.75e-08,160;UBERON:0002329,5.35e-08,71;UBERON:0003059,5.35e-08,71;UBERON:0007282,5.35e-08,71;UBERON:0004290,5.35e-08,71;UBERON:0009618,5.35e-08,71;UBERON:0007524,6.36e-08,73;UBERON:0003077,1.08e-07,72;UBERON:0007285,1.08e-07,72;UBERON:0005256,1.41e-07,122;UBERON:0000486,3.14e-07,83 | |||
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|phase1_expression=5.4503513781167,1.2846031433459,2.53717927372748,1.0007329835313,0.893922188854576,0.872338524100369,0,3.79031924056099,0,0.245733936501509,0,0,0,1.23766352960047,3.97676850873499,0,0.602694528023977,0,1.46379839637152,0,0.612002073732759,0,0.286235987131057,0,3.38965126905968,0,0,0,0,0,0,0,1.204823675113,1.47901604066715,1.85921281392724,0.284338464974843,0,0,0,0,0,0,0.257575567634187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569212969109448,0,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.87613732627923,0.670700859703636,1.02290049474824,1.0843174571537,2.00535164254356,0.579386075843295,0,1.45990461090791,1.03988298880475,1.55210578223795,1.22968699970376,0.654895377488563,0,0,0,0,0.26591592103773,0,0,0,0,0,0.347140501607594,1.69592382577203,0.419499436209906,0,0,0.516833518338658,2.84613010149368,0.66944122552934,2.01414658554573,0.760272105718513,0.976248230192678,1.10298924103761,0,0.892997282840798,0.673588117878509,1.46394924628319,3.06633274931766,0,1.28241220751285,0,0,0,23.35768172968,6.33152558322899,5.69359477496841,4.58938593198102,3.90135220418193,0.560677600142307,0,2.4666754841716,2.17847724779836,0.942974704487816,1.47115712802113,4.69208025699287,35.7229073177599,0,1.5608003841516,0,3.58676833324323,0.352303495931295,0.485618833104395,0,5.10385428137233,1.47401180774122,1.44656093646072,0,0.741800787835671,2.73048408581408,1.43723628363248,0.336672227908132,0.500474079487857,11.3596287348515,3.07284334616587,1.5324389789951,0.901428353439581,1.02088964844019,3.58779271377724,0.640672166455702,2.33125091275518,3.90118424909723,2.37020817248409,3.86460810068444,1.8611685633159,3.37552664482532,0.779496041289589,3.02920529092937,1.38074847963449,1.13152239773168,2.4850671476163,0.806016785821122,1.18692414617341,0.966304265816484,3.00020732649918,2.00763216772303,0.365921118388786,1.19276791489337,0.813357600086629,0.621966330092223,0.252320850875628,1.09493207722749,1.56449532329816,1.28648187638577,0,1.39310378409594,1.44375896333917,0.828147600278907,0.505754070234305,0.482022059766964,0.330881918197182,1.08939722046203,0.474541238222193,0.674156540800822,0.98110732562673,0,0.738155454624648,2.80483547606892,0.8231480226628,1.47008711385542,0,0,0.590789906681404,0,0.860919069801795,2.74508496477641,0.329250856225877,1.1240175325762,0.603173834469785,1.01847289674383,0,0,0,0.34779121492523,13.149773754412,1.15493158208859,0,0.951270761172991,1.58040879591855,0,0,0,0,2.81201501960331,1.51183915378974,0.992425680696705,4.03013352162817,2.03443756959773,0.766765358330422,0,0,0,0.144119953416961,0.12624243342638,0.126995788584338,0.381988425558278,2.34434894420094,0,0.205654985406647,1.50171528921959,0,2.01835951821649,0.87192013766656,8.43390286940925,39.6864167376378,0,2.535908257668,8.51001973071586,7.28052058379563,1.28603687131071,0,0.799266537048298,1.00084595560703,0,0.823240336780769,3.25736184293735,1.42156779497018,1.58390374586686,0.301439377059586,0.871533458600294,0.799783929456456,0,0,0,21.5662369942424,3.44585807502342,2.85273810081437,4.92256442669769,5.54786070886035,3.22309733831812,0,0,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,2.94459580125936,3.50119364741774,3.7977103317963,8.52680532276309,7.13715955188647,1.57702415033935,11.831282914264,9.63027519128701,0,4.1389228517002,0.664225598535437,1.47495334833363,6.69003831404238,2.15381273209015,6.17658162859541,0,0,0,0.606255142892519,0,0.604780586659361,5.45837177201309,12.276957863045,5.05188169979532,2.94720043288112,8.18731598506726,15.1202685874991,1.48418066444991,4.1636617326717,3.72879623157567,3.94210348866284,6.75030757938707,3.95115286763861,0.483437798366489,0.601519410909855,0.460404944679482,3.55924789310281,9.10455840033585,3.8026080338233,0,0.924184045252977,0.784349769176855,0,0.316654886678627,0,0.170093705276516,3.23873874153209,0,0.270946437543853,0.501689773854853,0.254876273045038,0,0.447749509444357,0,0,0.769350375349168,0.984043937099117,0.976135183992909,0.824328093181778,0.27470839445503,0.247528499761764,0.574265537996172,0.650060246036521,3.21367859688319,0.290012154876366,2.15668063960502,1.5350367472613,0.827019434907183,1.71872391789238,1.0151168573996,1.61930592090592,1.15741646340759,1.32227932288782,1.53752053892085,2.80747967488085,0.910420027699949,5.11330104227014,11.9628691795643,3.485186350803,0,1.06461206063404,0.869932992075073,0.55597265731176,3.00562262158182,5.95453390975468,11.3896592898741,3.0500831027812,0.255897791311334,2.99557291623744,2.54562598340749,0.78494864019923,0.539617372749944,1.37268514868027,1.06031162111118,2.83055474202642,4.75530963519025,1.26377536871694,0.48763373908959,0.974853958525138,2.11300293513511,9.82799362137497,4.94919011837995,3.39024349860728,0.551365343546124,2.65375590096488,2.19225442626881,1.15755106853338,2.62357900818653,0.608731130888112,0.6196469961995,1.97186921772569,2.4379929874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| ||
|short_description=p4@UACA | |||
}} | }} |
Latest revision as of 20:52, 18 September 2015
Short description: | p4@UACA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_UACA_5end |
Coexpression cluster: | NA |
Association with transcript: | -4bp_to_ENST00000539319_5end |
EntrezGene: | UACA |
HGNC: | 15947 |
UniProt: | F5H2B9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 6.39e-10 | 76 |
preadipocyte | 8.73e-09 | 12 |
muscle precursor cell | 4.87e-07 | 58 |
myoblast | 4.87e-07 | 58 |
multi-potent skeletal muscle stem cell | 4.87e-07 | 58 |
Ontology term | p-value | n |
---|---|---|
trunk | 2.55e-09 | 199 |
skeletal muscle tissue | 7.84e-09 | 62 |
striated muscle tissue | 7.84e-09 | 62 |
myotome | 7.84e-09 | 62 |
muscle tissue | 8.46e-09 | 64 |
musculature | 8.46e-09 | 64 |
musculature of body | 8.46e-09 | 64 |
mesenchyme | 1.75e-08 | 160 |
entire embryonic mesenchyme | 1.75e-08 | 160 |
somite | 5.35e-08 | 71 |
presomitic mesoderm | 5.35e-08 | 71 |
presumptive segmental plate | 5.35e-08 | 71 |
dermomyotome | 5.35e-08 | 71 |
trunk paraxial mesoderm | 5.35e-08 | 71 |
dense mesenchyme tissue | 6.36e-08 | 73 |
paraxial mesoderm | 1.08e-07 | 72 |
presumptive paraxial mesoderm | 1.08e-07 | 72 |
trunk mesenchyme | 1.41e-07 | 122 |
multilaminar epithelium | 3.14e-07 | 83 |