FFCP PHASE1:Hg19::chr2:181848738..181848765,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:181848738..181848765,+ to FFCP PHASE1:Hg19::chr2:181848738..181848765,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10477 | |EntrezGene=10477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12479 | |HGNC=12479 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000463105_5end | |||
|cluster_id=chr2:181848738..181848765,+ | |||
|description=CAGE_peak_13_at_UBE2E3_5end | |||
|id=chr2:181848738..181848765,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.47e-08!6;CL:0000031!3.47e-08!6;CL:0000404!3.47e-08!6;CL:0000047!5.00e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.03e-20!86;UBERON:0000073!1.99e-20!94;UBERON:0001016!1.99e-20!94;UBERON:0001017!2.66e-20!82;UBERON:0002619!1.81e-19!22;UBERON:0000956!5.86e-18!25;UBERON:0000203!5.86e-18!25;UBERON:0001869!3.17e-17!32;UBERON:0001950!4.41e-17!20;UBERON:0001893!5.34e-17!34;UBERON:0002020!7.62e-17!34;UBERON:0003528!7.62e-17!34;UBERON:0002780!8.46e-17!41;UBERON:0001890!8.46e-17!41;UBERON:0006240!8.46e-17!41;UBERON:0003080!3.43e-16!42;UBERON:0002791!3.80e-16!33;UBERON:0003056!3.75e-15!61;UBERON:0000955!6.08e-15!69;UBERON:0006238!6.08e-15!69;UBERON:0002616!1.22e-14!59;UBERON:0001049!2.34e-14!57;UBERON:0005068!2.34e-14!57;UBERON:0006241!2.34e-14!57;UBERON:0007135!2.34e-14!57;UBERON:0002346!1.80e-13!90;UBERON:0000153!4.38e-13!129;UBERON:0007811!4.38e-13!129;UBERON:0000033!5.54e-13!123;UBERON:0000924!5.98e-13!173;UBERON:0006601!5.98e-13!173;UBERON:0003075!5.24e-12!86;UBERON:0007284!5.24e-12!86;UBERON:0004121!1.02e-11!169;UBERON:0000200!1.52e-07!6;UBERON:0001872!6.19e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.98e-22;22!UBERON:0001950;7.56e-20;20!UBERON:0000956;1.24e-19;25!UBERON:0000203;1.24e-19;25!UBERON:0001869;2.79e-14;32!UBERON:0002791;1.20e-13;32!UBERON:0003528;7.24e-13;34!UBERON:0002020;7.24e-13;34!UBERON:0001893;1.82e-12;34!UBERON:0002021;1.25e-10;5!UBERON:0002780;1.37e-09;41!UBERON:0001890;1.37e-09;41!UBERON:0001870;3.62e-08;3!UBERON:0000955;4.41e-07;68!UBERON:0002902;9.77e-07;1!UBERON:0009899;9.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.14e-22,22;UBERON:0001950,8.23e-20,20;UBERON:0000956,1.32e-19,25;UBERON:0000203,1.32e-19,25;UBERON:0002791,4.56e-15,32;UBERON:0001869,4.56e-15,32;UBERON:0003528,4.18e-14,34;UBERON:0002020,4.18e-14,34;UBERON:0001893,4.18e-14,34;UBERON:0002780,5.98e-14,41;UBERON:0001890,5.98e-14,41;UBERON:0003080,5.98e-14,41;UBERON:0006240,5.98e-14,41;UBERON:0001017,1.29e-13,81;UBERON:0001016,5.86e-12,89;UBERON:0000955,9.57e-11,68;UBERON:0006238,9.57e-11,68;UBERON:0002021,1.66e-10,5;UBERON:0000073,2.16e-10,53;UBERON:0002616,2.16e-10,53;UBERON:0001049,9.72e-10,56;UBERON:0005068,9.72e-10,56;UBERON:0006241,9.72e-10,56;UBERON:0007135,9.72e-10,56;UBERON:0003056,8.62e-09,61;UBERON:0001870,3.02e-08,3;UBERON:0002346,6.27e-07,86 | |||
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| ||
|short_description=p13@UBE2E3 | |||
}} | }} |
Latest revision as of 20:50, 18 September 2015
Short description: | p13@UBE2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBE2E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000463105_5end |
EntrezGene: | UBE2E3 |
HGNC: | 12479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.14e-22 | 22 |
neocortex | 8.23e-20 | 20 |
cerebral cortex | 1.32e-19 | 25 |
pallium | 1.32e-19 | 25 |
regional part of telencephalon | 4.56e-15 | 32 |
cerebral hemisphere | 4.56e-15 | 32 |
brain grey matter | 4.18e-14 | 34 |
gray matter | 4.18e-14 | 34 |
telencephalon | 4.18e-14 | 34 |
regional part of forebrain | 5.98e-14 | 41 |
forebrain | 5.98e-14 | 41 |
anterior neural tube | 5.98e-14 | 41 |
future forebrain | 5.98e-14 | 41 |
central nervous system | 1.29e-13 | 81 |
nervous system | 5.86e-12 | 89 |
brain | 9.57e-11 | 68 |
future brain | 9.57e-11 | 68 |
occipital lobe | 1.66e-10 | 5 |
regional part of nervous system | 2.16e-10 | 53 |
regional part of brain | 2.16e-10 | 53 |
neural tube | 9.72e-10 | 56 |
neural rod | 9.72e-10 | 56 |
future spinal cord | 9.72e-10 | 56 |
neural keel | 9.72e-10 | 56 |
pre-chordal neural plate | 8.62e-09 | 61 |
frontal cortex | 3.02e-08 | 3 |
neurectoderm | 6.27e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.09e-07 | 1 |