FFCP PHASE1:Hg19::chr2:181848738..181848765,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:181848738..181848765,+
|short_description=p13@UBE2E3
|description=CAGE_peak_13_at_UBE2E3_5end
|association_with_transcript=5bp_to_ENST00000463105_5end
|En...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=10477 | |EntrezGene=10477 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12479 | |HGNC=12479 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=5bp_to_ENST00000463105_5end | |||
|cluster_id=chr2:181848738..181848765,+ | |||
|description=CAGE_peak_13_at_UBE2E3_5end | |||
|id=chr2:181848738..181848765,+ | |||
|ontology_enrichment_celltype=CL:0000540!3.47e-08!6;CL:0000031!3.47e-08!6;CL:0000404!3.47e-08!6;CL:0000047!5.00e-08!8 | |||
|ontology_enrichment_celltype_v019=CL:0000222;9.77e-07;1 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:9119;2.09e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:9119,2.09e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0005743!1.03e-20!86;UBERON:0000073!1.99e-20!94;UBERON:0001016!1.99e-20!94;UBERON:0001017!2.66e-20!82;UBERON:0002619!1.81e-19!22;UBERON:0000956!5.86e-18!25;UBERON:0000203!5.86e-18!25;UBERON:0001869!3.17e-17!32;UBERON:0001950!4.41e-17!20;UBERON:0001893!5.34e-17!34;UBERON:0002020!7.62e-17!34;UBERON:0003528!7.62e-17!34;UBERON:0002780!8.46e-17!41;UBERON:0001890!8.46e-17!41;UBERON:0006240!8.46e-17!41;UBERON:0003080!3.43e-16!42;UBERON:0002791!3.80e-16!33;UBERON:0003056!3.75e-15!61;UBERON:0000955!6.08e-15!69;UBERON:0006238!6.08e-15!69;UBERON:0002616!1.22e-14!59;UBERON:0001049!2.34e-14!57;UBERON:0005068!2.34e-14!57;UBERON:0006241!2.34e-14!57;UBERON:0007135!2.34e-14!57;UBERON:0002346!1.80e-13!90;UBERON:0000153!4.38e-13!129;UBERON:0007811!4.38e-13!129;UBERON:0000033!5.54e-13!123;UBERON:0000924!5.98e-13!173;UBERON:0006601!5.98e-13!173;UBERON:0003075!5.24e-12!86;UBERON:0007284!5.24e-12!86;UBERON:0004121!1.02e-11!169;UBERON:0000200!1.52e-07!6;UBERON:0001872!6.19e-07!5 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;1.98e-22;22!UBERON:0001950;7.56e-20;20!UBERON:0000956;1.24e-19;25!UBERON:0000203;1.24e-19;25!UBERON:0001869;2.79e-14;32!UBERON:0002791;1.20e-13;32!UBERON:0003528;7.24e-13;34!UBERON:0002020;7.24e-13;34!UBERON:0001893;1.82e-12;34!UBERON:0002021;1.25e-10;5!UBERON:0002780;1.37e-09;41!UBERON:0001890;1.37e-09;41!UBERON:0001870;3.62e-08;3!UBERON:0000955;4.41e-07;68!UBERON:0002902;9.77e-07;1!UBERON:0009899;9.77e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002619,2.14e-22,22;UBERON:0001950,8.23e-20,20;UBERON:0000956,1.32e-19,25;UBERON:0000203,1.32e-19,25;UBERON:0002791,4.56e-15,32;UBERON:0001869,4.56e-15,32;UBERON:0003528,4.18e-14,34;UBERON:0002020,4.18e-14,34;UBERON:0001893,4.18e-14,34;UBERON:0002780,5.98e-14,41;UBERON:0001890,5.98e-14,41;UBERON:0003080,5.98e-14,41;UBERON:0006240,5.98e-14,41;UBERON:0001017,1.29e-13,81;UBERON:0001016,5.86e-12,89;UBERON:0000955,9.57e-11,68;UBERON:0006238,9.57e-11,68;UBERON:0002021,1.66e-10,5;UBERON:0000073,2.16e-10,53;UBERON:0002616,2.16e-10,53;UBERON:0001049,9.72e-10,56;UBERON:0005068,9.72e-10,56;UBERON:0006241,9.72e-10,56;UBERON:0007135,9.72e-10,56;UBERON:0003056,8.62e-09,61;UBERON:0001870,3.02e-08,3;UBERON:0002346,6.27e-07,86 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0,0,0,0,1.15235184896,0,0,0,0.149448680551801,0,0,0,0.61246251376468,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,1.20036438433761,0.309157587715317,0.257640540045629,0.18611685633159,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.604512589365842,0.169560592310488,0,0,0,0.243947412259191,0,1.62671520017326,0.725627385107593,0.756962552626885,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,2.66422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.00509759200609,2.55175500661265,0,0,0,0.49076596687656,1.00034104211935,0,0,0,0,0,0,0,0,3.98535359121262,1.47495334833363,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.48335359146061,0,0,0,0,0,0,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.456469358066384,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,13.3228787199128,2.81974010175699,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0.344743373241465,4.37406920074882,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,5.34116834975004,0,0,2.14250933141343,0,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,1.2029051231617,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0,0,0.600420288709789,0,0,0,2.62887354279315,0,0,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,5.56660782866512,0.817220436669454,0.482259445395058,0.962776056180637,0.415440338029185,0,0,0.425246896606173,0,0.86686278029118,0.472091293214983,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.07444650333337,0.1251909307065,0,0,0,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.539124056983409,0,0.218419276384028,0.169732529954025,10.2035961648808,0.247871528518004,0.558644917973244,0,0.0788617450012534,0.80057074828547,0.705351887381368,0,0.449604575675217,0,0.319267718114302,1.02558182120378,3.27693205088234,1.24483054435592,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,1.56215619722769,0.206686796501184,0.824405532520789,1.64092442705466,0,0,0,0,0.535701835878287,2.01770233331294,0,0,0,0,0,0.0679697329768317,0.657727735628491,0,0.222462803784138,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0,0.33883824611688,0,0.452888530700021,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,2.32699963398588,0.730336388246517,0,0,0.473314686579554,0.611923411718232,1.74540276136151,0,0,0,0,0,0.546327859818478,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0.714193294391221,0,0.124149428591716,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.37129905888014,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.0764134057479513,0,0.0787107813136792,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.850813354476611,0.221729397462564,0.263504357079378,0.261958150995425,0,0,0,0,0,0.476981248610684,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.68203280042692,0,0,0,0,0,0,1.15235184896,0,0,0,0.149448680551801,0,0,0,0.61246251376468,0.368502951935304,0.309977343527296,0,0,0,0,0.168336113954066,0.125118519871964,0,0,0.30648779579902,0,0,0.179389635688862,0,0,1.20036438433761,0.309157587715317,0.257640540045629,0.18611685633159,0.337552664482532,0,0.504867548488229,0.0920498986422993,0,0.710019185033229,0.604512589365842,0.169560592310488,0,0,0,0.243947412259191,0,1.62671520017326,0.725627385107593,0.756962552626885,0.72995471815166,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0.134831308160164,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0.171567810298526,0,0,0,0,0,0,0,0.927443239800615,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.088048434013226,0,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0.1466765716419,0,0,0,0,0,0.257207374262142,0,2.66422179016099,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.61642896765115,0,0,0,0,0,0,1.30139853857622,0.773288812777695,1.00509759200609,2.55175500661265,0,0,0,0.49076596687656,1.00034104211935,0,0,0,0,0,0,0,0,3.98535359121262,1.47495334833363,0,0.195801157462741,0.343143423810856,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164254312027618,0,0.116210378459959,0,0,0,0,0.182091168006717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0.0915694648183434,0.247528499761764,0,0,0,0.48335359146061,0,0,0,0,0,0,2.31483292681517,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0.280797178113459,0.456469358066384,0,0,0.50787533340481,0,0,0,0,0,0,0,0,0.278406173895242,0,0.811367035427949,13.3228787199128,2.81974010175699,0,0,0,0,0,0,0,0,0.994147647766298,0,0,0,0.63337622438398,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0.556608588971108,1.99613798001194,0,0,0,0,0,0,0.344743373241465,4.37406920074882,0.173624994933292,0,0,0,0,0.295547618953547,0.219385397153973,0.32681539055697,0,0,0,0,0,0,0,0,0,0,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,5.34116834975004,0,0,2.14250933141343,0,0,0.103688191397247,0,0,0,0,0,0.416024019039416,0,0,0,0,0,0,0,0,0,0,2.71176888936639,0,0,1.2029051231617,0,0.0801588202515337,0,0,0,0,0.171594997861965,0,0.372757606696298,0,0,0,0,0,0.600420288709789,0,0,0,2.62887354279315,0,0,0,0,0,0,0.335917362433631,0,0,0.0787831823072236,0,0.0674035438541849,0,0,5.56660782866512,0.817220436669454,0.482259445395058,0.962776056180637,0.415440338029185,0,0,0.425246896606173,0,0.86686278029118,0.472091293214983,0,0,0,0,0.662091970365432,0,0.542999601753713,0,0.653174720218818,0,0,0.340776043570843,0,0,0,0.129282956361551,0.13223260174269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.77213635993397,2.07444650333337,0.1251909307065,0,0,0,0,0.499921631848426,0,0,0,0,0.144921028610825,0,0,0,0,0,2.66943366478961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0.343395705182793,0.673498977531838,1.26184898228651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414775308455192,0,0,0,0,0,0,0,0,0.172214979660816,0,0.184105950251841,0,0,0,0.539124056983409,0,0.218419276384028,0.169732529954025,10.2035961648808,0.247871528518004,0.558644917973244,0,0.0788617450012534,0.80057074828547,0.705351887381368,0,0.449604575675217,0,0.319267718114302,1.02558182120378,3.27693205088234,1.24483054435592,0.322951291263702,0,0,0.235939446695481,0,0,0,0,0,0,0,0,0,0,0,0.472763092328763,1.56215619722769,0.206686796501184,0.824405532520789,1.64092442705466,0,0,0,0,0.535701835878287,2.01770233331294,0,0,0,0,0,0.0679697329768317,0.657727735628491,0,0.222462803784138,0,0,0,0.913158720509496,0,0,0.214429632529969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1598144313382,0,0,0.198950775161368,0,0.33883824611688,0,0.452888530700021,0,0,0,0,0,0,0,0.8453114551668,0,0,0,0,0,0,2.32699963398588,0.730336388246517,0,0,0.473314686579554,0.611923411718232,1.74540276136151,0,0,0,0,0,0.546327859818478,0,0,0,0,0,0.0757786982182394,0.535928260312357,0,0.103432995861895,0,0.714193294391221,0,0.124149428591716,0,0,0,0,0,0,0,0,0.0814032686109745,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p13@UBE2E3 | |||
}} | }} |
Latest revision as of 20:50, 18 September 2015
Short description: | p13@UBE2E3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_UBE2E3_5end |
Coexpression cluster: | NA |
Association with transcript: | 5bp_to_ENST00000463105_5end |
EntrezGene: | UBE2E3 |
HGNC: | 12479 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of cerebral cortex | 2.14e-22 | 22 |
neocortex | 8.23e-20 | 20 |
cerebral cortex | 1.32e-19 | 25 |
pallium | 1.32e-19 | 25 |
regional part of telencephalon | 4.56e-15 | 32 |
cerebral hemisphere | 4.56e-15 | 32 |
brain grey matter | 4.18e-14 | 34 |
gray matter | 4.18e-14 | 34 |
telencephalon | 4.18e-14 | 34 |
regional part of forebrain | 5.98e-14 | 41 |
forebrain | 5.98e-14 | 41 |
anterior neural tube | 5.98e-14 | 41 |
future forebrain | 5.98e-14 | 41 |
central nervous system | 1.29e-13 | 81 |
nervous system | 5.86e-12 | 89 |
brain | 9.57e-11 | 68 |
future brain | 9.57e-11 | 68 |
occipital lobe | 1.66e-10 | 5 |
regional part of nervous system | 2.16e-10 | 53 |
regional part of brain | 2.16e-10 | 53 |
neural tube | 9.72e-10 | 56 |
neural rod | 9.72e-10 | 56 |
future spinal cord | 9.72e-10 | 56 |
neural keel | 9.72e-10 | 56 |
pre-chordal neural plate | 8.62e-09 | 61 |
frontal cortex | 3.02e-08 | 3 |
neurectoderm | 6.27e-07 | 86 |
Ontology term | p-value | n |
---|---|---|
acute myeloid leukemia | 2.09e-07 | 1 |