FFCP PHASE1:Hg19::chr5:77944425..77944442,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000503686_5end | |association_with_transcript=0bp_to_ENST00000503686_5end | ||
|cluster_id=chr5:77944425..77944442,- | |||
|description=CAGE_peak_5_at_LHFPL2_5end | |description=CAGE_peak_5_at_LHFPL2_5end | ||
|id=chr5:77944425..77944442,- | |id=chr5:77944425..77944442,- | ||
|ontology_enrichment_celltype=CL:0000055!4.61e-13!180;CL:0002321!3.43e-12!248;CL:0000220!1.39e-11!246;CL:0000222!4.91e-11!119;CL:0000133!1.23e-07!59;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | |ontology_enrichment_celltype=CL:0000055!4.61e-13!180;CL:0002321!3.43e-12!248;CL:0000220!1.39e-11!246;CL:0000222!4.91e-11!119;CL:0000133!1.23e-07!59;CL:0000393!4.44e-07!60;CL:0000211!4.44e-07!60 | ||
|ontology_enrichment_celltype_v019=CL:0002494;3.35e-09;16 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,4.05e-09,121;CL:0002494,5.49e-09,16;CL:0002321,8.29e-09,250;CL:0000393,6.94e-08,61;CL:0000211,6.94e-08,61;CL:0000192,4.36e-07,43;CL:0000514,4.36e-07,43;CL:0000187,7.44e-07,55;CL:0000148,8.94e-07,10;CL:0000541,8.94e-07,10 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:2394;5.06e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,2.08e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002049!2.94e-12!79;UBERON:0007798!2.94e-12!79;UBERON:0004872!1.38e-11!84;UBERON:0004535!1.05e-09!110;UBERON:0001009!2.12e-09!113;UBERON:0000477!2.40e-09!286;UBERON:0000468!3.27e-09!659;UBERON:0000055!8.32e-09!69;UBERON:0001981!1.04e-08!60;UBERON:0007500!1.04e-08!60;UBERON:0004537!1.04e-08!60;UBERON:0006965!1.04e-08!60;UBERON:0003914!3.33e-08!118;UBERON:0000922!5.42e-08!612;UBERON:0004111!1.04e-07!241;UBERON:0000119!1.57e-07!312;UBERON:0000483!2.67e-07!309;UBERON:0000948!4.94e-07!24;UBERON:0005498!4.94e-07!24;UBERON:0004140!4.94e-07!24;UBERON:0009881!4.94e-07!24;UBERON:0004141!4.94e-07!24;UBERON:0003084!4.94e-07!24;UBERON:0007005!4.94e-07!24;UBERON:0004139!4.94e-07!24;UBERON:0004291!4.94e-07!24;UBERON:0000467!8.69e-07!625;UBERON:0000480!9.81e-07!626 | |ontology_enrichment_uberon=UBERON:0002049!2.94e-12!79;UBERON:0007798!2.94e-12!79;UBERON:0004872!1.38e-11!84;UBERON:0004535!1.05e-09!110;UBERON:0001009!2.12e-09!113;UBERON:0000477!2.40e-09!286;UBERON:0000468!3.27e-09!659;UBERON:0000055!8.32e-09!69;UBERON:0001981!1.04e-08!60;UBERON:0007500!1.04e-08!60;UBERON:0004537!1.04e-08!60;UBERON:0006965!1.04e-08!60;UBERON:0003914!3.33e-08!118;UBERON:0000922!5.42e-08!612;UBERON:0004111!1.04e-07!241;UBERON:0000119!1.57e-07!312;UBERON:0000483!2.67e-07!309;UBERON:0000948!4.94e-07!24;UBERON:0005498!4.94e-07!24;UBERON:0004140!4.94e-07!24;UBERON:0009881!4.94e-07!24;UBERON:0004141!4.94e-07!24;UBERON:0003084!4.94e-07!24;UBERON:0007005!4.94e-07!24;UBERON:0004139!4.94e-07!24;UBERON:0004291!4.94e-07!24;UBERON:0000467!8.69e-07!625;UBERON:0000480!9.81e-07!626 | ||
|ontology_enrichment_uberon_v019=UBERON:0000948;8.35e-09;22!UBERON:0006876;1.66e-07;11!UBERON:0007100;3.33e-07;25 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004535,6.17e-13,109;UBERON:0001009,3.59e-12,112;UBERON:0002049,4.73e-12,78;UBERON:0007798,4.73e-12,78;UBERON:0004872,3.69e-11,83;UBERON:0000948,4.10e-10,24;UBERON:0005498,4.10e-10,24;UBERON:0004140,4.10e-10,24;UBERON:0009881,4.10e-10,24;UBERON:0004141,4.10e-10,24;UBERON:0003084,4.10e-10,24;UBERON:0007005,4.10e-10,24;UBERON:0004139,4.10e-10,24;UBERON:0004291,4.10e-10,24;UBERON:0007100,2.12e-08,27;UBERON:0006876,5.15e-08,11;UBERON:0000055,3.32e-07,68;UBERON:0007500,4.74e-07,59;UBERON:0001981,4.74e-07,59;UBERON:0004537,4.74e-07,59;UBERON:0006965,4.74e-07,59;UBERON:0002385,6.23e-07,64;UBERON:0001015,6.23e-07,64;UBERON:0000383,6.23e-07,64;UBERON:0003914,6.78e-07,117 | |||
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|phase1_expression=0.54503513781167,0.214100523890983,0.422863212287913,0,0,0,0,0,0.261185628199839,0.245733936501509,0,0.873765488520689,0.527533956456907,0.37129905888014,0.331397375727916,2.6893005858071,1.80808358407193,3.65155045193687,0.975865597581014,0.861847406537515,0.816002764977012,0.940364164434263,0.286235987131057,0.958120975510189,0.87879847716362,0.382067028739756,0.57470412614962,0.787107813136792,0,0,0.154816123316076,0,0.30120591877825,0,1.85921281392724,1.42169232487422,0,0,0,0.217010870715852,0.447830948479849,0.647787332037959,0.77272670290256,0.145398238779565,0.377875943688809,1.69808842831471,0.464858073811369,1.23350366406548,1.23882548358041,0.28769239232215,0,0,0,0,0,0.941211697713023,0.818718450173537,1.12361742222542,0.612167784741805,0.320929027076094,0,0.329851300186716,0.598390972864896,0,0.580418477257168,0.56738522469114,0,0,0.521482918420201,0.868755378820466,0.605399502633369,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.382273228125229,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.69490601792545,3.32442660793179,1.80719576192283,2.50668955317945,1.01392563272577,2.3858578411533,2.43317435151318,2.6469748805939,3.76939975686359,5.62142628436007,0.851363990735132,0,0,0,0.174129737299267,0.26591592103773,5.24679373471752,6.86393892936153,5.94332002127304,1.39133685156694,0.860234595106124,0.347140501607594,1.13061588384802,1.67799774483962,0.550236083880135,1.25396979922086,3.6178346283706,2.84613010149368,2.00832367658802,1.20848795132744,0,0.732186172644509,0,0,0.803697554556718,0.673588117878509,1.0135033243499,1.53316637465883,2.84779697870439,0.916008719652036,0,0,0.436094052142534,0.496971951695318,0.25326102332916,1.45650098894541,3.15520282823695,1.41867352879343,1.12135520028461,1.06748995729705,0.24666754841716,0.622422070799533,2.2900814251847,2.7788523529288,1.36221684880438,5.76175924479999,0.234321431833797,1.24864030732128,0,0.298897361103602,0.352303495931295,0.647491777472526,0.421352420106746,0.408308342509787,0.61417158655884,0.206651562351531,2.37600571456411,1.23633464639278,0,0,0.336672227908132,0.500474079487857,0.554128230968366,0.438977620880838,0,1.35214253015937,1.70148274740032,0.538168907066586,0,0.211931901159562,0.600182192168805,0.206105058476878,0.257640540045629,0.18611685633159,1.0126579934476,0.0974370051611986,0.504867548488229,0,0.484938170456436,0.355009592516614,0.604512589365842,0.339121184620975,0.193260853163297,0,0,2.07355300420312,1.98794652482228,1.74290914304278,1.45125477021519,1.00928340350251,3.28479623168247,0,0,0,0,0,0,0.337169380156203,0,0.220587945464788,0.217879444092406,0.237270619111097,0.539325232640658,0.196221465125346,0.38474715694639,1.4763109092493,1.40241773803446,1.2347220339942,0,0,0,0,0.441463099414651,0.368965315629341,3.43135620597051,0,1.1240175325762,0.100528972411631,0,2.28065813717227,0,1.44331342025273,2.43453850447661,2.7003999674239,0.866198686566443,0.462985512576611,0.380508304469197,0,0.858486162094873,0,0.234004265139238,0.148631162288728,0,0,0.141775097242386,1.34337784054272,0.871901815541886,1.15014803749563,0,0,0.207328115540772,0,0,1.8414389344729,1.14596527667483,5.86087236050235,1.71072446022705,1.54241239054985,0.300343057843917,1.42913216315289,0.336393253036082,2.61576041299968,0.36669142910475,1.55126058909333,0,0,0.26593811658487,0,0.257207374262142,0,0,0.142977993658148,0.542621605391443,0,0,0.355391948742546,0,5.12446941001296,4.35766729300147,3.29910870900788,0,0,0,0.958499421966331,4.59447743336456,0,0.434343920002738,0,0.716243852959582,0,0,0,0,0.76228387266739,1.30139853857622,1.54657762555539,1.17261385734044,1.27587750330633,0,0,0,0.12269149171914,0.500170521059677,0.542530047399471,0.831883446123229,0.178428988797162,0.157702415033935,0.117141414992713,0.601892199455438,0,0,0,0.184369168541703,0.347534457872331,1.17480694477644,2.40200396667599,0,0,0,0.909382714338778,0,1.20956117331872,0.496215615637554,0.306923946576125,0.280660094433074,0.768834895534206,1.02341449813341,0,0,0,0.355123450626254,0.410635780069046,1.55776328755086,0.813472649219715,0.483437798366489,0.200506470303285,0.460404944679482,2.52591785962135,1.45672934405374,4.19598127870157,0.451199612907412,0.385076685522074,0,0,0.527758144464379,1.13733384070897,0.680374821106063,2.37507507712353,0,2.16757150035082,0,0.254876273045038,0.831076008928724,0.895499018888713,0,0,0.769350375349168,0.984043937099117,0.650756789328606,0.309123034943167,0.27470839445503,0.165018999841176,0,0,1.6068392984416,1.25671933779759,0.616194468458578,0.307007349452259,0.275673144969061,0.537101224341368,0,1.19317278382541,0.890320356467374,0,0.384380134730212,0.382838137483752,0.708104465988849,0,1.88887408098384,0.6970372701606,0.924100740528266,0.532306030317022,0,0.74129687641568,2.28999818787186,1.86079184679834,1.89827654831236,2.47819252100972,0.255897791311334,1.71175595213568,0.95460974377781,1.56989728039846,0.359744915166629,0.274537029736055,1.64937363283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| ||
|short_description=p5@LHFPL2 | |short_description=p5@LHFPL2 | ||
}} | }} |
Latest revision as of 20:40, 18 September 2015
Short description: | p5@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_LHFPL2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000503686_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 4.05e-09 | 121 |
cardiocyte | 5.49e-09 | 16 |
embryonic cell | 8.29e-09 | 250 |
electrically responsive cell | 6.94e-08 | 61 |
electrically active cell | 6.94e-08 | 61 |
smooth muscle cell | 4.36e-07 | 43 |
smooth muscle myoblast | 4.36e-07 | 43 |
muscle cell | 7.44e-07 | 55 |
melanocyte | 8.94e-07 | 10 |
melanoblast | 8.94e-07 | 10 |
Ontology term | p-value | n |
---|---|---|
cardiovascular system | 6.17e-13 | 109 |
circulatory system | 3.59e-12 | 112 |
vasculature | 4.73e-12 | 78 |
vascular system | 4.73e-12 | 78 |
splanchnic layer of lateral plate mesoderm | 3.69e-11 | 83 |
heart | 4.10e-10 | 24 |
primitive heart tube | 4.10e-10 | 24 |
primary heart field | 4.10e-10 | 24 |
anterior lateral plate mesoderm | 4.10e-10 | 24 |
heart tube | 4.10e-10 | 24 |
heart primordium | 4.10e-10 | 24 |
cardiac mesoderm | 4.10e-10 | 24 |
cardiogenic plate | 4.10e-10 | 24 |
heart rudiment | 4.10e-10 | 24 |
primary circulatory organ | 2.12e-08 | 27 |
vasculature of organ | 5.15e-08 | 11 |
vessel | 3.32e-07 | 68 |
epithelial tube open at both ends | 4.74e-07 | 59 |
blood vessel | 4.74e-07 | 59 |
blood vasculature | 4.74e-07 | 59 |
vascular cord | 4.74e-07 | 59 |
muscle tissue | 6.23e-07 | 64 |
musculature | 6.23e-07 | 64 |
musculature of body | 6.23e-07 | 64 |
epithelial tube | 6.78e-07 | 117 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 2.08e-08 | 14 |