FFCP PHASE1:Hg19::chr3:50655081..50655137,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7867 | |EntrezGene=7867 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6888 | |HGNC=6888 | ||
|TSSclassifier=strong | |||
|UniProt=Q16644,B5BUJ8 | |UniProt=Q16644,B5BUJ8 | ||
|association_with_transcript=84bp_to_AB451303,AB451434_5end | |association_with_transcript=84bp_to_AB451303,AB451434_5end | ||
|cluster_id=chr3:50655081..50655137,+ | |||
|coexpression_cluster_id=C4336 | |||
|description=CAGE_peak_4_at_MAPKAPK3_5end | |description=CAGE_peak_4_at_MAPKAPK3_5end | ||
|id=chr3:50655081..50655137,+ | |id=chr3:50655081..50655137,+ | ||
|ontology_enrichment_celltype=CL:0000766!1.09e-29!76;CL:0000763!5.28e-29!112;CL:0000049!5.28e-29!112;CL:0002057!6.27e-26!42;CL:0000860!1.81e-24!45;CL:0000557!2.99e-24!71;CL:0000839!1.44e-23!70;CL:0002194!5.84e-22!63;CL:0000576!5.84e-22!63;CL:0000040!5.84e-22!63;CL:0000559!5.84e-22!63;CL:0002009!3.30e-21!65;CL:0000037!4.91e-19!172;CL:0000566!4.91e-19!172;CL:0000988!1.90e-18!182;CL:0002032!2.25e-16!165;CL:0000837!2.25e-16!165;CL:0000738!1.56e-15!140;CL:0002031!1.64e-10!124;CL:0002087!5.41e-10!119;CL:0002393!1.44e-07!9;CL:0002397!1.44e-07!9;CL:0002320!3.39e-07!365;CL:0000134!6.03e-07!358;CL:0000094!6.75e-07!8 | |ontology_enrichment_celltype=CL:0000766!1.09e-29!76;CL:0000763!5.28e-29!112;CL:0000049!5.28e-29!112;CL:0002057!6.27e-26!42;CL:0000860!1.81e-24!45;CL:0000557!2.99e-24!71;CL:0000839!1.44e-23!70;CL:0002194!5.84e-22!63;CL:0000576!5.84e-22!63;CL:0000040!5.84e-22!63;CL:0000559!5.84e-22!63;CL:0002009!3.30e-21!65;CL:0000037!4.91e-19!172;CL:0000566!4.91e-19!172;CL:0000988!1.90e-18!182;CL:0002032!2.25e-16!165;CL:0000837!2.25e-16!165;CL:0000738!1.56e-15!140;CL:0002031!1.64e-10!124;CL:0002087!5.41e-10!119;CL:0002393!1.44e-07!9;CL:0002397!1.44e-07!9;CL:0002320!3.39e-07!365;CL:0000134!6.03e-07!358;CL:0000094!6.75e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.80e-31;33!CL:0002057;1.80e-31;33!CL:0000576;1.22e-25;48!CL:0000473;3.58e-25;39!CL:0000234;3.58e-25;39!CL:0000766;3.25e-22;69!CL:0000763;6.96e-15;100!CL:0000094;2.62e-11;8!CL:0002393;1.03e-08;6!CL:0002397;1.03e-08;6!CL:0000081;1.45e-07;11!CL:0000738;2.88e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.06e-54,72;CL:0000763,1.32e-48,108;CL:0000049,1.32e-48,108;CL:0000860,4.58e-46,42;CL:0002057,4.58e-46,42;CL:0000473,5.62e-44,48;CL:0000234,5.62e-44,48;CL:0000557,9.21e-44,67;CL:0000839,1.34e-42,66;CL:0002194,1.73e-41,59;CL:0000576,1.73e-41,59;CL:0000040,1.73e-41,59;CL:0000559,1.73e-41,59;CL:0002009,1.63e-39,61;CL:0000037,4.19e-32,168;CL:0000988,5.51e-29,177;CL:0002032,5.05e-28,161;CL:0000837,5.05e-28,161;CL:0000738,1.46e-27,136;CL:0002087,2.92e-19,115;CL:0002031,1.01e-18,120;CL:0002393,1.68e-12,9;CL:0002397,1.68e-12,9;CL:0000094,2.75e-11,8;CL:0000134,6.30e-11,354;CL:0002320,1.60e-10,361;CL:0000219,6.74e-08,386;CL:0000081,1.50e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;8.99e-33;42!CL:0000049;8.03e-14;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.57e-29!102;UBERON:0003061!1.57e-29!102;UBERON:0002371!2.21e-26!80;UBERON:0001474!2.31e-24!86;UBERON:0002193!2.34e-24!112;UBERON:0004765!7.92e-22!101;UBERON:0001434!7.92e-22!101;UBERON:0002405!3.55e-14!115;UBERON:0003081!4.46e-12!216;UBERON:0002204!6.78e-10!167 | |ontology_enrichment_uberon=UBERON:0002390!1.57e-29!102;UBERON:0003061!1.57e-29!102;UBERON:0002371!2.21e-26!80;UBERON:0001474!2.31e-24!86;UBERON:0002193!2.34e-24!112;UBERON:0004765!7.92e-22!101;UBERON:0001434!7.92e-22!101;UBERON:0002405!3.55e-14!115;UBERON:0003081!4.46e-12!216;UBERON:0002204!6.78e-10!167 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,8.80e-48,98;UBERON:0003061,8.80e-48,98;UBERON:0002371,1.96e-45,76;UBERON:0002193,3.18e-42,108;UBERON:0001474,7.09e-42,82;UBERON:0004765,2.71e-37,90;UBERON:0002405,8.02e-37,93;UBERON:0001434,1.96e-32,100;UBERON:0003081,1.93e-20,203;UBERON:0002204,6.43e-15,167;UBERON:0000926,2.01e-10,315;UBERON:0004120,2.01e-10,315;UBERON:0006603,2.01e-10,315;UBERON:0002384,3.43e-10,371 | |||
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| ||
|short_description=p4@MAPKAPK3 | |short_description=p4@MAPKAPK3 | ||
}} | }} |
Latest revision as of 20:40, 18 September 2015
Short description: | p4@MAPKAPK3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_MAPKAPK3_5end |
Coexpression cluster: | C4336_heart_CD14CD16_Alveolar_CD14_Mammary_Renal_left |
Association with transcript: | 84bp_to_AB451303, AB451434_5end |
EntrezGene: | MAPKAPK3 |
HGNC: | 6888 |
UniProt: | Q16644B5BUJ8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.06e-54 | 72 |
myeloid cell | 1.32e-48 | 108 |
common myeloid progenitor | 1.32e-48 | 108 |
classical monocyte | 4.58e-46 | 42 |
CD14-positive, CD16-negative classical monocyte | 4.58e-46 | 42 |
defensive cell | 5.62e-44 | 48 |
phagocyte | 5.62e-44 | 48 |
granulocyte monocyte progenitor cell | 9.21e-44 | 67 |
myeloid lineage restricted progenitor cell | 1.34e-42 | 66 |
monopoietic cell | 1.73e-41 | 59 |
monocyte | 1.73e-41 | 59 |
monoblast | 1.73e-41 | 59 |
promonocyte | 1.73e-41 | 59 |
macrophage dendritic cell progenitor | 1.63e-39 | 61 |
hematopoietic stem cell | 4.19e-32 | 168 |
hematopoietic cell | 5.51e-29 | 177 |
hematopoietic oligopotent progenitor cell | 5.05e-28 | 161 |
hematopoietic multipotent progenitor cell | 5.05e-28 | 161 |
leukocyte | 1.46e-27 | 136 |
nongranular leukocyte | 2.92e-19 | 115 |
hematopoietic lineage restricted progenitor cell | 1.01e-18 | 120 |
intermediate monocyte | 1.68e-12 | 9 |
CD14-positive, CD16-positive monocyte | 1.68e-12 | 9 |
granulocyte | 2.75e-11 | 8 |
mesenchymal cell | 6.30e-11 | 354 |
connective tissue cell | 1.60e-10 | 361 |
motile cell | 6.74e-08 | 386 |
blood cell | 1.50e-07 | 11 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 8.80e-48 | 98 |
blood island | 8.80e-48 | 98 |
bone marrow | 1.96e-45 | 76 |
hemolymphoid system | 3.18e-42 | 108 |
bone element | 7.09e-42 | 82 |
skeletal element | 2.71e-37 | 90 |
immune system | 8.02e-37 | 93 |
skeletal system | 1.96e-32 | 100 |
lateral plate mesoderm | 1.93e-20 | 203 |
musculoskeletal system | 6.43e-15 | 167 |
mesoderm | 2.01e-10 | 315 |
mesoderm-derived structure | 2.01e-10 | 315 |
presumptive mesoderm | 2.01e-10 | 315 |
connective tissue | 3.43e-10 | 371 |