FFCP PHASE1:Hg19::chr19:46801639..46801699,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=64344 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15825 | |||
|TSSclassifier=strong | |||
|UniProt=B4DNA2,E9PB04,C9JR42,E9PJR0,E9PLC8 | |||
|association_with_transcript=0bp_to_ENST00000244303,ENST00000339613,ENST00000457771,ENST00000472815,ENST00000526506,ENST00000528563,ENST00000533145,uc002pei.3,uc002pej.1,uc002pek.2,uc010xxx.1,uc010xxy.1_5end | |||
|cluster_id=chr19:46801639..46801699,+ | |||
|description=CAGE_peak_1_at_HIF3A_5end | |||
|id=chr19:46801639..46801699,+ | |||
|ontology_enrichment_celltype=CL:0000115!1.07e-08!35;CL:0002139!4.03e-07!24 | |||
|ontology_enrichment_celltype_v019=CL:0000115;1.52e-07;36!CL:0002139;2.52e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.48e-09,36;CL:0002139,2.44e-07,24 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.79e-43!115;UBERON:0000477!3.36e-25!286;UBERON:0000119!2.47e-24!312;UBERON:0000483!1.11e-23!309;UBERON:0004111!2.09e-23!241;UBERON:0002346!5.42e-23!90;UBERON:0003075!6.99e-23!86;UBERON:0007284!6.99e-23!86;UBERON:0002616!7.97e-23!59;UBERON:0001049!9.74e-23!57;UBERON:0005068!9.74e-23!57;UBERON:0006241!9.74e-23!57;UBERON:0007135!9.74e-23!57;UBERON:0000468!2.47e-21!659;UBERON:0000475!8.34e-21!365;UBERON:0000955!4.89e-20!69;UBERON:0006238!4.89e-20!69;UBERON:0000025!7.57e-20!194;UBERON:0000481!1.37e-19!347;UBERON:0003080!5.74e-18!42;UBERON:0001017!7.27e-18!82;UBERON:0000467!1.68e-17!625;UBERON:0000153!2.18e-17!129;UBERON:0007811!2.18e-17!129;UBERON:0005743!2.28e-17!86;UBERON:0002780!2.37e-17!41;UBERON:0001890!2.37e-17!41;UBERON:0006240!2.37e-17!41;UBERON:0000480!2.72e-17!626;UBERON:0003056!7.39e-17!61;UBERON:0000033!7.74e-17!123;UBERON:0002050!1.72e-15!605;UBERON:0005423!1.72e-15!605;UBERON:0000922!2.46e-15!612;UBERON:0000924!2.56e-15!173;UBERON:0006601!2.56e-15!173;UBERON:0000923!5.17e-15!604;UBERON:0005291!5.17e-15!604;UBERON:0006598!5.17e-15!604;UBERON:0002532!5.17e-15!604;UBERON:0004121!5.64e-15!169;UBERON:0000073!1.31e-14!94;UBERON:0001016!1.31e-14!94;UBERON:0002020!1.47e-14!34;UBERON:0003528!1.47e-14!34;UBERON:0001893!2.80e-14!34;UBERON:0002791!5.95e-14!33;UBERON:0000064!1.38e-13!219;UBERON:0001869!2.48e-13!32;UBERON:0000479!6.76e-12!787;UBERON:0002049!6.73e-11!79;UBERON:0007798!6.73e-11!79;UBERON:0002619!7.73e-11!22;UBERON:0000062!1.21e-10!511;UBERON:0004872!2.06e-10!84;UBERON:0000956!2.50e-10!25;UBERON:0000203!2.50e-10!25;UBERON:0001950!1.03e-09!20;UBERON:0001009!2.63e-09!113;UBERON:0004535!4.02e-08!110;UBERON:0000055!4.12e-08!69;UBERON:0004290!3.10e-07!70;UBERON:0003103!4.09e-07!69;UBERON:0002385!9.39e-07!63;UBERON:0001015!9.39e-07!63;UBERON:0000383!9.39e-07!63 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;5.55e-13;41!UBERON:0001890;5.55e-13;41!UBERON:0007023;9.68e-13;114!UBERON:0003528;4.17e-12;34!UBERON:0002020;4.17e-12;34!UBERON:0002619;4.63e-12;22!UBERON:0002791;6.21e-12;32!UBERON:0001893;6.66e-12;34!UBERON:0000073;7.29e-12;53!UBERON:0002616;7.29e-12;53!UBERON:0001869;1.07e-11;32!UBERON:0001950;8.85e-11;20!UBERON:0000956;1.13e-09;25!UBERON:0000203;1.13e-09;25!UBERON:0001017;1.60e-09;75!UBERON:0000955;5.89e-09;68!UBERON:0001016;2.25e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.15e-48,114;UBERON:0010314,3.05e-22,132;UBERON:0003075,4.86e-22,82;UBERON:0007284,4.86e-22,82;UBERON:0001049,8.86e-22,56;UBERON:0005068,8.86e-22,56;UBERON:0006241,8.86e-22,56;UBERON:0007135,8.86e-22,56;UBERON:0002346,2.65e-21,86;UBERON:0004111,4.45e-21,240;UBERON:0000119,5.16e-20,309;UBERON:0000073,6.13e-20,53;UBERON:0002616,6.13e-20,53;UBERON:0000483,2.25e-19,306;UBERON:0000955,1.06e-18,68;UBERON:0006238,1.06e-18,68;UBERON:0000025,5.61e-18,192;UBERON:0002780,1.79e-17,41;UBERON:0001890,1.79e-17,41;UBERON:0003080,1.79e-17,41;UBERON:0006240,1.79e-17,41;UBERON:0001017,6.67e-17,81;UBERON:0010371,1.13e-16,104;UBERON:0002050,1.92e-16,564;UBERON:0000923,1.93e-16,560;UBERON:0010316,1.93e-16,560;UBERON:0005291,1.93e-16,560;UBERON:0006598,1.93e-16,560;UBERON:0010317,1.93e-16,560;UBERON:0002532,1.93e-16,560;UBERON:0003056,1.49e-15,61;UBERON:0004121,8.93e-15,171;UBERON:0000924,8.93e-15,171;UBERON:0006601,8.93e-15,171;UBERON:0005423,1.01e-14,581;UBERON:0001016,1.60e-14,89;UBERON:0003528,2.44e-14,34;UBERON:0002020,2.44e-14,34;UBERON:0000922,3.84e-14,592;UBERON:0001893,4.79e-14,34;UBERON:0002791,2.83e-13,32;UBERON:0001869,5.36e-13,32;UBERON:0011216,2.53e-12,223;UBERON:0002619,4.64e-12,22;UBERON:0000479,1.15e-11,773;UBERON:0001950,8.67e-11,20;UBERON:0000956,1.13e-09,25;UBERON:0000203,1.13e-09,25;UBERON:0002049,2.72e-09,78;UBERON:0007798,2.72e-09,78;UBERON:0004872,3.78e-09,83;UBERON:0001009,9.24e-09,112;UBERON:0004535,1.58e-07,109;UBERON:0007503,2.09e-07,78;UBERON:0003103,7.94e-07,68;UBERON:0000055,8.26e-07,68;UBERON:0007100,8.36e-07,27 | |||
|phase1_expression=7.44881355009282,5.99481466894753,10.5715803071978,7.00513088471913,30.8403155154829,8.72338524100369,10.1319951267324,4.42203911398782,22.2007783969863,9.09215565055583,28.6098478868695,13.5433650720707,25.0578629317031,3.21792517696121,4.30816588446291,0,0,0,0.975865597581014,0.123121058076788,0,0.940364164434263,0.286235987131057,0.273748850145768,0.753255837568817,0,0,0,0,0,0.154816123316076,0,0,0.739508020333575,0,0,0,0,0,0,0.223915474239924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.3727840842678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.263384084775077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,41.4471672733735,6.03630773733273,12.6583936225095,0,0,0.144846518960824,0,0,0.283604451492204,2.4390233720882,1.75669571386252,23.3797649763417,0.364295288292542,0,0,0,0,0,0,0,1.19257444420023,5.16140757063675,4.85996702250632,3.39184765154406,6.71199097935849,6.05259692268148,9.40477349415648,70.2893584940575,38.7785226328514,32.8026200509377,12.4877088303836,11.4040815857777,34.6568121718401,3.30896772311282,3.24056779152704,14.9130546234413,23.800113498374,12.3872628531654,7.66583187329416,1.89853131913626,0.366403487860815,0,0,0.872188104285069,0,0.759783069987479,0.529636723252875,9.75244510545967,4.25602058638028,0.560677600142307,0,0,55.3955643011584,35.5636174263976,58.6828232177317,55.3968185180449,54.1605369011199,49.2075006850973,18.7296046098192,12.5503800739779,25.555724374358,19.8464302707963,28.327765264423,22.3316782656575,1.63323337003915,8.35273357720022,2.58314452939414,0,0,21.8438726865126,20.8399261126709,6.90178067211671,10.635074189117,0.277064115484183,0,0,0,13.6118619792025,0.179389635688862,0.213557388818567,0,0,0,0.257640540045629,0,0,0.0974370051611986,0.252433774244115,0.0920498986422993,1.45481451136931,0.355009592516614,0,0.169560592310488,0,0,0,0,0,0,0,0,0,1.56449532329816,0,0,28.7908115379827,14.4375896333917,0,0,0,0.110293972732394,0,0,0.134831308160164,0,0,11.0723318193697,15.426595118379,8.6430542379594,33.8120036186747,0,0,5.31710916013264,0,0,3.08822058537346,0.109750285408626,1.1240175325762,0.201057944823262,1.94435734832912,35.5131052788254,4.15973914111831,1.44331342025273,1.27523445472584,0.939269553886573,8.37325397014228,12.9635943521451,5.32711626256875,0,0,0,0,0,0,0,0,0.0895585227028483,0,0,0,0,0.414656231081544,0,0.12624243342638,0.380987365753014,0,0,5.13217338068116,1.13110241973656,0,0,8.52196241024741,3.05172048183296,4.5469737208989,0,225.323560886686,5.071816515336,0,0,3.85811061393213,4.25547396069835,5.32844358032199,33.885784496981,237.125641556061,37.8690554919154,3.25736184293735,24.8774364119782,7.91951872933429,0,0,0,0,0,0,0,0,0,1.44781306667579,2.4657158706046,0.358121926479791,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,3.43536176813592,9.00306937907419,4.34024037919577,0,0,0,0,5.71797589482666,11.3703752027992,104.50780200543,0,2.02806085395873,5.21301686808497,19.9717180611995,16.8140277667319,0,0,0,28.4939917159484,83.2177197552485,101.603138558773,0.248107807818777,0.460385919864187,0.280660094433074,0.256278298511402,0,0.321707842287215,4.45254199334973,6.01417805830357,0.887808626565635,1.64254312027618,5.71179872101983,1.16210378459959,0,0,0,0.229628896329213,0.364182336013434,0,0,0.231046011313244,0,0,0.105551628892876,37.5320167433959,10.2056223165909,4.75015015424707,32.3877230649608,0,1.00337954770971,0,0,0,0,0,0,0,1.30151357865721,16.692643886931,0,0,2.29706215198469,0,9.64103579064957,0.193341436584244,6.62409053592971,9.3637241582939,11.5782720887006,34.9115795821889,40.604674295984,2.81247870473133,0.534192213880424,0.165284915360978,0.384380134730212,2.4246415373971,0.2023155617111,1.39453664789186,3.77774816196768,0.6970372701606,2.7723022215848,0,0,0.74129687641568,0,4.46590043231601,1.89827654831236,16.5848268713728,35.0579974096527,60.7673363008167,6.0458617105928,5.49464048139461,6.1156635578327,11.8050922786504,10.131866601729,2.22400729730648,0,0,36.0848966926297,4.6305563029944,4.22600587027022,0.409499734223957,0.141405431953713,7.910568163417,0.551365343546124,0.66343897524122,4.82295973779139,17.9420415622673,60.9982119403369,0,1.239293992399,0,9.1783265410593,19.453310120598,0,10.6428319221179,0.633322905892992,0.329294892959902,17.4557659932229,35.6933414649883,0.288666338176536,0,0,20.052629565454,0,0,0.443430153536676,0.229723400206959,0,0,0,0,0,0,0,0,0,0.962479855263359,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.46174797895425,0,0,0,0,65.1961397759928,0,0,0,20.770770172179,0.296964680832639,88.1551215024796,33.8010200240541,57.2524524790787,0.111308705022906,0,0,44.8307973564907,30.3912307084262,0,0,0,0,0,0,0,79.9011585659162,0,0,31.9879806211422,13.8224466261158,7.98455192004777,0,0,47.8499719786964,0,0,0,0,0.874813840149763,0.347249989866585,25.6865001886013,34.3699850082413,24.4130778107333,31.6256683403302,18.6194999940735,11.6274260491605,0,0,77.719761088835,0,0,0,0,6.38002319463839,0.549585560411174,2.13213910407454,0,0,0,0,0,0,0,0,0,0,0,0,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| |||
|short_description=p1@HIF3A | |||
}} |
Latest revision as of 20:22, 18 September 2015
Short description: | p1@HIF3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIF3A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000244303, ENST00000339613, ENST00000457771, ENST00000472815, ENST00000526506, ENST00000528563, ENST00000533145, uc002pei.3, uc002pej.1, uc002pek.2, uc010xxx.1, uc010xxy.1_5end |
EntrezGene: | HIF3A |
HGNC: | 15825 |
UniProt: | B4DNA2E9PB04C9JR42E9PJR0E9PLC8 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.48e-09 | 36 |
endothelial cell of vascular tree | 2.44e-07 | 24 |