FFCP PHASE1:Hg19::chr12:51785511..51785525,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9498 | |EntrezGene=9498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11034 | |HGNC=11034 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc001ryp.1_5end | |association_with_transcript=0bp_to_uc001ryp.1_5end | ||
|cluster_id=chr12:51785511..51785525,+ | |||
|coexpression_cluster_id=C12 | |||
|description=CAGE_peak_5_at_SLC4A8_5end | |description=CAGE_peak_5_at_SLC4A8_5end | ||
|id=chr12:51785511..51785525,+ | |id=chr12:51785511..51785525,+ | ||
|ontology_enrichment_celltype=CL:0000839!1.07e-08!70;CL:0000557!1.35e-08!71;CL:0002057!8.88e-08!42;CL:0000860!6.87e-07!45 | |ontology_enrichment_celltype=CL:0000839!1.07e-08!70;CL:0000557!1.35e-08!71;CL:0002057!8.88e-08!42;CL:0000860!6.87e-07!45 | ||
|ontology_enrichment_celltype_v019=CL:0000346;1.32e-13;3!CL:1000428;1.32e-13;3!CL:0000097;6.86e-09;5!CL:0002559;1.59e-08;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000346,7.92e-14,3;CL:1000428,7.92e-14,3;CL:0000097,6.87e-09,5;CL:0002028,6.87e-09,5;CL:0002559,1.18e-08,5 | |||
|ontology_enrichment_development_v019=UBERON:0008425;7.81e-11;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!9.19e-07!112;UBERON:0002371!9.79e-07!80 | |||
|ontology_enrichment_uberon_v019=UBERON:0000412;1.32e-13;3!UBERON:0001992;1.32e-13;3!UBERON:0002038;7.81e-11;1!UBERON:0009661;7.81e-11;1!UBERON:0002950;7.81e-11;1!UBERON:0001891;7.81e-11;1!UBERON:0002073;1.59e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000412,7.92e-14,3;UBERON:0001992,7.92e-14,3;UBERON:0002038,1.77e-10,1;UBERON:0009661,1.77e-10,1;UBERON:0002950,1.77e-10,1;UBERON:0001891,1.77e-10,1;UBERON:0009616,1.77e-10,1;UBERON:0010286,1.77e-10,1;UBERON:0002073,1.18e-08,5;UBERON:0005086,1.18e-08,5 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,1.6446715520873,1.54853185447552,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,1.06729878806013,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.528290604079356,4.35389042635621,0.576479813667846,7.70078843900918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,1.13697999995054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.434589487688032,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.353830258013357,0,0,0,0,0.741412462787447,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,1.5476039091159,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.500763722825999,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.203977659483963,0.801652215796681,0.0918948995348449,0,0.151557396436479,0,0.829169439458779,0.310298987585686,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0.218441372130172,0.263766978228454,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164201178899891,0.157421562627358,0,0,0,0,0,0.369754010166788,0,0,0,0,0.401088894940283,0,0.223915474239924,0.32389366601898,0,0.145398238779565,0.377875943688809,0,0,1.6446715520873,1.54853185447552,0.28769239232215,0.512321413058201,0.236482229888585,0.344745680736619,0,1.35426486594342,0.564727018627814,0.272906150057846,0.674170453335254,0,0,0.639337125799041,0,0,0,0.290209238628584,0,0.622822248995575,0.251248665256743,0,0.65156653411535,0.605399502633369,0,0.632924774881769,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,1.32171328579026,0,0,0,0,0,0,0.32592226663359,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,0,0.253019692019503,0,0,0,0,0,0,0.473554504088034,0,0,0.267440195783507,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0.39752481473341,0.860234595106124,0,0.56530794192401,0,0.550236083880135,0.208994966536811,0,1.06729878806013,0,0,0,0.24406205754817,0,0,0,0,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.570471821544449,0,0,0,0.140450806702248,0,0.122834317311768,0.516628905878827,0,0,0.910161361938026,0,0,0.125118519871964,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.487894824518382,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22988438543114,0,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0,0,0,0,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0,0,0,0,0.528290604079356,4.35389042635621,0.576479813667846,7.70078843900918,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07813787429759,0.256686072559497,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0,0,0,0,0.215714200818617,0.213455115606889,0,1.66435439510497,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,0.241718899183244,0,0,0,0,0,0.451199612907412,0,0.784349769176855,0,0,0,0,0,0,0,0,0.254876273045038,0,0,0,0.261435451024901,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0.192444225451024,0,0,0.0941438007767792,0,0,0,0,0,0.764637207142375,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0.425846237690326,0,0,0,0,0,0,1.23087398947712,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0,0.222617410045812,0,0,0,0.276283915531148,0,0,0,0,0.0898683511473268,0,0,0,0,0,0,0.278304294485554,0,0,1.13697999995054,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.269272933229316,0.434589487688032,0,0.183195186803725,0,0,0,0.166211681900156,0,0,0,0,0.158936578980379,0,0,0,0,0,0.353830258013357,0,0,0,0,0.741412462787447,0,0,0,0,0,0,3.62972148145992,0,0,0,0,0,0.330991955875499,0,0,0.569219092059585,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0.248505071130865,0,0,0,0,0,0,0.958337652243951,0,0,0,0,0,0,0,0,0,0,0,1.16495949527454,0.0787831823072236,0,0.0674035438541849,0,0.169346664131569,0,0,0.160753148465019,0.137539436597234,0,0,1.5476039091159,0.0607495566580247,0,0.157611414598396,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0.146552233678082,0,0.129282956361551,0.13223260174269,0,0,0.213574825135389,0,0.828478110694391,0,0,0,0.638341257770182,0,0,0,0,0.314108192500469,0,0,0.500763722825999,0,0.332787154610557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.147855149989634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56302802246618,0,0,0,0.0675375846183947,0,0.413373593002368,0.507326481551255,0,0,0,0,0,0,0,0,0,0,0,0,0.135939465953663,0.197318320688547,0,0.111231401892069,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118332000730565,0,0,0,0,0,0,0.196300467230486,0,0,0,0,0,0,0.198950775161368,0,0.33883824611688,0,0.150962843566674,0.154348316215889,0.218559560503957,0,0,0,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0.160482733378337,0,0,1.00337708206016,0,0,0,0,0,0,0,0,0.109265571963696,0.253397002022874,0.203977659483963,0.801652215796681,0.0918948995348449,0,0.151557396436479,0,0.829169439458779,0.310298987585686,0,0,0.193766729508018,0.124149428591716,0,0,0,0,0,0.0673520530145875,0.143444410785353,0,0,0,0,0,0,0,0.406896178315738,0,0,0 | ||
|short_description=p5@SLC4A8 | |short_description=p5@SLC4A8 | ||
}} | }} |
Latest revision as of 20:18, 18 September 2015
Short description: | p5@SLC4A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SLC4A8_5end |
Coexpression cluster: | C12_Mast_Basophils_immature_chorionic_mature_CD14_Eosinophils |
Association with transcript: | 0bp_to_uc001ryp.1_5end |
EntrezGene: | SLC4A8 |
HGNC: | 11034 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle dermal papilla cell | 7.92e-14 | 3 |
stem cell of epidermis | 7.92e-14 | 3 |
mast cell | 6.87e-09 | 5 |
basophil mast progenitor cell | 6.87e-09 | 5 |
hair follicle cell | 1.18e-08 | 5 |
Ontology term | p-value | n |
---|---|---|
dermal papilla | 7.92e-14 | 3 |
papillary layer of dermis | 7.92e-14 | 3 |
substantia nigra | 1.77e-10 | 1 |
midbrain nucleus | 1.77e-10 | 1 |
regional part of midbrain | 1.77e-10 | 1 |
midbrain | 1.77e-10 | 1 |
presumptive midbrain | 1.77e-10 | 1 |
midbrain neural tube | 1.77e-10 | 1 |
hair follicle | 1.18e-08 | 5 |
hair follicle placode | 1.18e-08 | 5 |