FFCP PHASE1:Hg19::chr12:51785057..51785105,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:51785057..51785105,+
|short_description=p4@SLC4A8
|description=CAGE_peak_4_at_SLC4A8_5end
|association_with_transcript=0bp_to_ENST00000535225_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9498 | |EntrezGene=9498 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11034 | |HGNC=11034 | ||
|TSSclassifier=strong | |||
|UniProt=F5GZ31 | |UniProt=F5GZ31 | ||
|association_with_transcript=0bp_to_ENST00000535225_5end | |||
|cluster_id=chr12:51785057..51785105,+ | |||
|description=CAGE_peak_4_at_SLC4A8_5end | |||
|id=chr12:51785057..51785105,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.53e-10!70;CL:0000557!5.05e-10!71;CL:0000766!1.05e-08!76;CL:0002009!1.85e-08!65;CL:0002194!2.10e-08!63;CL:0000576!2.10e-08!63;CL:0000040!2.10e-08!63;CL:0000559!2.10e-08!63;CL:0002620!1.53e-07!23;CL:0002057!1.86e-07!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.84e-12;39!CL:0000234;4.84e-12;39!CL:0000097;4.64e-11;5!CL:0000860;1.67e-09;33!CL:0002057;1.67e-09;33!CL:0000228;2.65e-07;1!CL:0002372;2.65e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.61e-11,66;CL:0000557,2.59e-11,67;CL:0000097,6.55e-11,5;CL:0002028,6.55e-11,5;CL:0000766,2.32e-10,72;CL:0000473,7.21e-10,48;CL:0000234,7.21e-10,48;CL:0002194,1.51e-07,59;CL:0000576,1.51e-07,59;CL:0000040,1.51e-07,59;CL:0000559,1.51e-07,59;CL:0000860,2.07e-07,42;CL:0002057,2.07e-07,42;CL:0000228,2.50e-07,1;CL:0002372,2.50e-07,1;CL:0002009,3.01e-07,61;CL:0000763,3.13e-07,108;CL:0000049,3.13e-07,108 | |||
|ontology_enrichment_development_v019=UBERON:0005425;2.65e-07;1!CL:0002057;5.02e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.12e-12!57;UBERON:0005068!9.12e-12!57;UBERON:0006241!9.12e-12!57;UBERON:0007135!9.12e-12!57;UBERON:0002780!6.36e-10!41;UBERON:0001890!6.36e-10!41;UBERON:0006240!6.36e-10!41;UBERON:0001893!7.36e-10!34;UBERON:0002020!8.32e-10!34;UBERON:0003528!8.32e-10!34;UBERON:0004765!1.06e-09!101;UBERON:0001434!1.06e-09!101;UBERON:0003080!1.71e-09!42;UBERON:0002616!2.20e-09!59;UBERON:0002791!3.03e-09!33;UBERON:0002371!4.16e-09!80;UBERON:0001869!2.10e-08!32;UBERON:0007023!2.52e-08!115;UBERON:0000073!2.73e-08!94;UBERON:0001016!2.73e-08!94;UBERON:0000062!3.27e-08!511;UBERON:0000467!3.38e-08!625;UBERON:0000480!4.18e-08!626;UBERON:0000955!8.49e-08!69;UBERON:0006238!8.49e-08!69;UBERON:0001474!1.14e-07!86;UBERON:0002308!2.47e-07!9;UBERON:0000125!2.47e-07!9;UBERON:0000033!2.56e-07!123;UBERON:0002420!7.59e-07!9;UBERON:0007245!7.59e-07!9;UBERON:0010009!7.59e-07!9;UBERON:0010011!7.59e-07!9;UBERON:0000454!7.59e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0005162;6.20e-13;2!UBERON:0000122;6.20e-13;2!UBERON:0002336;2.65e-07;1!UBERON:0000941;2.65e-07;1!UBERON:0001785;2.65e-07;1!UBERON:0002464;2.65e-07;1!UBERON:0004904;2.65e-07;1!UBERON:0011215;2.65e-07;1!UBERON:0001018;2.65e-07;1!UBERON:0001021;2.65e-07;1!UBERON:0002473;2.65e-07;1!UBERON:0005340;2.65e-07;1!UBERON:0003544;2.65e-07;1!UBERON:0005970;2.65e-07;1!UBERON:0002316;2.65e-07;1!UBERON:0001020;2.65e-07;1!UBERON:0002437;2.65e-07;1!UBERON:0003112;7.13e-07;1!UBERON:0011158;7.13e-07;1!UBERON:0003128;7.13e-07;1!UBERON:0001703;7.13e-07;1!UBERON:0002241;7.13e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005162,5.89e-13,2;UBERON:0000122,5.89e-13,2;UBERON:0002405,3.02e-10,93;UBERON:0002371,1.09e-09,76;UBERON:0001474,8.37e-09,82;UBERON:0002193,2.03e-08,108;UBERON:0001434,5.25e-08,100;UBERON:0004765,8.28e-08,90;UBERON:0000941,2.36e-07,1;UBERON:0001785,2.36e-07,1;UBERON:0002464,2.36e-07,1;UBERON:0004904,2.36e-07,1;UBERON:0001021,2.36e-07,1;UBERON:0003902,2.36e-07,1;UBERON:0005425,2.36e-07,1;UBERON:0002336,2.82e-07,1;UBERON:0011215,2.82e-07,1;UBERON:0001018,2.82e-07,1;UBERON:0002473,2.82e-07,1;UBERON:0005340,2.82e-07,1;UBERON:0003544,2.82e-07,1;UBERON:0005970,2.82e-07,1;UBERON:0002316,2.82e-07,1;UBERON:0001020,2.82e-07,1;UBERON:0002437,2.82e-07,1;UBERON:0002390,5.62e-07,98;UBERON:0003061,5.62e-07,98;UBERON:0003112,6.02e-07,1;UBERON:0011158,6.02e-07,1;UBERON:0003128,6.02e-07,1;UBERON:0001703,6.02e-07,1;UBERON:0002241,6.02e-07,1;UBERON:0004761,6.02e-07,1;UBERON:0009617,6.02e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,1.31064823278103,0.263766978228454,0.123766352960047,0,0,0,0,0,0,0,0,0,0.273748850145768,0.125542639594803,0,0,0,0.393364276848904,0,0,0,0.30120591877825,0,0,0,0,0,0,0.217010870715852,0.223915474239924,0.32389366601898,0.257575567634187,0,0.377875943688809,1.94067248950253,0.464858073811369,1.23350366406548,0.309706370895104,0,1.0246428261164,0.709446689665756,0.344745680736619,1.29096936716765,0,1.31769637679823,0.545812300115692,0.449446968890169,0,0.641858054152187,1.27867425159808,0.329851300186716,0,0,0.290209238628584,0.56738522469114,0,0,3.12889751052121,1.3031330682307,0,0.368277635987565,0,0.211255286311942,0.212604299965044,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.130979075497713,0,0,0.324547393654683,0.348259474598534,0.664789802594326,0,0,0.371457501329565,0,0,0.347140501607594,0.56530794192401,0,0,0.208994966536811,1.03366703667732,1.42306505074684,0,0,0,0,0.367663080345869,0,0.17859945656816,0,0.112611480483322,0,0.949265659568129,0.183201743930407,0,0,0,0,0,0,0,0,0.560677600142307,0,0,0,0,0,0,0,0.234321431833797,0.624320153660641,0.570471821544449,0.149448680551801,0,0.485618833104395,0,0,0.245668634623536,0.103325781175765,1.18800285728205,0.741800787835671,0,0.718618141816238,0.336672227908132,0,0.831192346452549,0.877955241761676,0.612975591598039,0.300476117813194,0.113432183160021,1.61450672119976,0.640672166455702,0,1.20036438433761,0.721367704669072,1.03056216018252,0.37223371266318,1.0126579934476,0,0.504867548488229,0,0.161646056818812,0.355009592516614,0.705264687593482,0.169560592310488,0,0,0,0,0,0,0.10366105501537,0,0,0,0.643240938192885,0,0,0,0,0,0.241011029883482,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0.109750285408626,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0.492434012174795,1.40402559083543,0.594524649154913,0,0.16798212819886,0.141775097242386,0,0,0,2.46331618947972,2.3773077183571,1.03664057770386,0,0.25248486685276,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.099972991182057,0,1.00451418286425,0,0,0,2.85273810081437,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.35142424497814,0.300946099727719,0,0,0,0,0.347534457872331,0,0,0,0,0,0.909382714338778,0,3.0239029332968,0,0,0,0,0,0,0,0,0,0.0821271560138091,0.519254429183621,0.348631135379878,0,0.200506470303285,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0.270946437543853,0,0,0,0,0.877039506583738,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0,0,0,0.10115778085555,0,0.94443704049192,0,0,0,0,0,0,0,0,0,0,0.855877976067841,0.318203247925937,0,0,0,0,0,0,0.421258456238981,0,0.243713489631284,0,0,0,0,0,0,0.438450885253763,0.578775534266688,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0.411362273086194,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0.270455678475983,0.33307196799782,1.4098700508785,0,0.146508179271894,0,0,0,0.23874448473769,0.296964680832639,0,0.994147647766298,0.140669416410513,0,0,0,0,0,0,0,0,0,0.0898683511473268,0,0,0,0,0,0.969332746095218,0.463840490809256,0,0,0.437299999980979,0,0,0,0.236387681767936,0,0,0,1.77148277162768,0,0,0.110579259931225,0.295547618953547,0,0,0,0.0769502585037971,0,0,0.179515288819544,0,0,0.183195186803725,0,1.02193298195737,0,0.498635045700469,0,0,0,0,0.476809736941136,0,0,0.282706142867882,0,0,0.0884575645033392,0,0,0,0,2.42644078730437,0,0.468528891450678,0,0,0,0,0,0,0.189559738885464,0,0,0,0.330991955875499,0,0,0,0,0,0.0979923974143777,0,0,0,0,0,0,0,0,0,0.137041924646751,0,0.379864775735272,0,0,0,0,0,0,0,0,0.124252535565433,0,0,0,0,0,1.20084057741958,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0846733320657845,0,0.544813624446302,0,0,0,0.2249738915515,0,0.485996453264197,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0.653174720218818,0,0,0,0,0,0,1.16354660725395,0.52893040697076,0,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0.1251909307065,0,0.332787154610557,1.17983165588629,0,0,0,0,0,0,0,0,0,0,0.757612021100357,0,0.889811221596536,0.228840068396924,0.151230923763239,0,0,0.159296767163702,0,0,0,0,1.04349012362347,0,1.52322084867518,0.406870733204662,0,0,0.464033759878494,1.19428766609585,0,0,0,0,0,0,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157265941855896,0.655257829152084,0,0,0,0,0.318004350653419,0,0,0,0,0.642292250964595,0,0.319267718114302,0,0,0.622415272177961,1.29180516505481,2.85538840518309,0,0,0.183428598521679,0,0,0,0,0.0752103283492573,0,0,0,0,0,0.540300676947157,0.781078098613847,0.413373593002368,0.443910671357348,0,0,0,0,0.255524855279191,0,0,0,0,0.177404740325278,0,0,0.679697329768317,0.591954962065642,0,0.111231401892069,0,0.471346769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| ||
|short_description=p4@SLC4A8 | |||
}} | }} |
Latest revision as of 20:16, 18 September 2015
Short description: | p4@SLC4A8 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SLC4A8_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000535225_5end |
EntrezGene: | SLC4A8 |
HGNC: | 11034 |
UniProt: | F5GZ31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.61e-11 | 66 |
granulocyte monocyte progenitor cell | 2.59e-11 | 67 |
mast cell | 6.55e-11 | 5 |
basophil mast progenitor cell | 6.55e-11 | 5 |
myeloid leukocyte | 2.32e-10 | 72 |
defensive cell | 7.21e-10 | 48 |
phagocyte | 7.21e-10 | 48 |
monopoietic cell | 1.51e-07 | 59 |
monocyte | 1.51e-07 | 59 |
monoblast | 1.51e-07 | 59 |
promonocyte | 1.51e-07 | 59 |
classical monocyte | 2.07e-07 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.07e-07 | 42 |
multinucleate cell | 2.50e-07 | 1 |
myotube | 2.50e-07 | 1 |
macrophage dendritic cell progenitor | 3.01e-07 | 61 |
myeloid cell | 3.13e-07 | 108 |
common myeloid progenitor | 3.13e-07 | 108 |
Ontology term | p-value | n |
---|---|---|
multi cell component structure | 5.89e-13 | 2 |
neuron projection bundle | 5.89e-13 | 2 |
immune system | 3.02e-10 | 93 |
bone marrow | 1.09e-09 | 76 |
bone element | 8.37e-09 | 82 |
hemolymphoid system | 2.03e-08 | 108 |
skeletal system | 5.25e-08 | 100 |
skeletal element | 8.28e-08 | 90 |
cranial nerve II | 2.36e-07 | 1 |
cranial nerve | 2.36e-07 | 1 |
nerve trunk | 2.36e-07 | 1 |
nerve connecting eye with brain | 2.36e-07 | 1 |
nerve | 2.36e-07 | 1 |
retinal neural layer | 2.36e-07 | 1 |
presumptive neural retina | 2.36e-07 | 1 |
corpus callosum | 2.82e-07 | 1 |
central nervous system cell part cluster | 2.82e-07 | 1 |
axon tract | 2.82e-07 | 1 |
intercerebral commissure | 2.82e-07 | 1 |
dorsal telencephalic commissure | 2.82e-07 | 1 |
brain white matter | 2.82e-07 | 1 |
brain commissure | 2.82e-07 | 1 |
white matter | 2.82e-07 | 1 |
nervous system commissure | 2.82e-07 | 1 |
cerebral hemisphere white matter | 2.82e-07 | 1 |
hematopoietic system | 5.62e-07 | 98 |
blood island | 5.62e-07 | 98 |
olfactory region | 6.02e-07 | 1 |
primary subdivision of skull | 6.02e-07 | 1 |
cranium | 6.02e-07 | 1 |
neurocranium | 6.02e-07 | 1 |
chondrocranium | 6.02e-07 | 1 |
cartilaginous neurocranium | 6.02e-07 | 1 |
head paraxial mesoderm | 6.02e-07 | 1 |