FFCP PHASE1:Hg19::chr5:77806227..77806251,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10184 | |EntrezGene=10184 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=6588 | |HGNC=6588 | ||
|TSSclassifier=strong | |||
|UniProt=Q6ZUX7 | |UniProt=Q6ZUX7 | ||
|association_with_transcript=-18bp_to_AK125227_5end | |association_with_transcript=-18bp_to_AK125227_5end | ||
|cluster_id=chr5:77806227..77806251,- | |||
|coexpression_cluster_id=C392 | |||
|description=CAGE_peak_6_at_LHFPL2_5end | |description=CAGE_peak_6_at_LHFPL2_5end | ||
|id=chr5:77806227..77806251,- | |id=chr5:77806227..77806251,- | ||
|ontology_enrichment_celltype=CL:0002194!1.82e-18!63;CL:0000576!1.82e-18!63;CL:0000040!1.82e-18!63;CL:0000559!1.82e-18!63;CL:0002057!2.11e-18!42;CL:0000839!2.67e-17!70;CL:0002009!3.47e-17!65;CL:0000557!2.86e-16!71;CL:0000860!6.19e-16!45;CL:0000766!1.59e-15!76;CL:0000763!1.30e-11!112;CL:0000049!1.30e-11!112 | |ontology_enrichment_celltype=CL:0002194!1.82e-18!63;CL:0000576!1.82e-18!63;CL:0000040!1.82e-18!63;CL:0000559!1.82e-18!63;CL:0002057!2.11e-18!42;CL:0000839!2.67e-17!70;CL:0002009!3.47e-17!65;CL:0000557!2.86e-16!71;CL:0000860!6.19e-16!45;CL:0000766!1.59e-15!76;CL:0000763!1.30e-11!112;CL:0000049!1.30e-11!112 | ||
|ontology_enrichment_celltype_v019=CL:0000473;2.16e-38;39!CL:0000234;2.16e-38;39!CL:0000860;6.27e-37;33!CL:0002057;6.27e-37;33!CL:0000576;9.18e-22;48!CL:0000766;1.92e-13;69!CL:0000235;3.51e-11;6!CL:0000763;1.59e-08;100!CL:0000153;1.63e-07;9!CL:0000447;1.63e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,2.46e-40,48;CL:0000234,2.46e-40,48;CL:0002194,1.10e-39,59;CL:0000576,1.10e-39,59;CL:0000040,1.10e-39,59;CL:0000559,1.10e-39,59;CL:0002009,6.60e-38,61;CL:0000557,8.38e-35,67;CL:0000839,6.20e-34,66;CL:0000860,2.26e-31,42;CL:0002057,2.26e-31,42;CL:0000766,6.64e-30,72;CL:0000763,7.09e-20,108;CL:0000049,7.09e-20,108;CL:0002087,1.22e-13,115;CL:0002031,1.50e-12,120;CL:0000235,3.59e-11,6;CL:0000738,1.17e-09,136;CL:0002032,7.53e-09,161;CL:0000837,7.53e-09,161;CL:0000037,1.84e-08,168;CL:0000134,7.33e-08,354;CL:0000153,1.32e-07,9;CL:0000447,1.32e-07,9;CL:0000988,2.03e-07,177;CL:0002320,2.46e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.26e-23;42!CL:0000049;9.88e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.33e-16!115;UBERON:0002371!1.78e-15!80;UBERON:0002204!4.41e-14!167;UBERON:0002390!2.59e-13!102;UBERON:0003061!2.59e-13!102;UBERON:0001474!9.51e-13!86;UBERON:0004765!1.15e-12!101;UBERON:0001434!1.15e-12!101;UBERON:0002193!9.61e-12!112;UBERON:0001049!7.47e-11!57;UBERON:0005068!7.47e-11!57;UBERON:0006241!7.47e-11!57;UBERON:0007135!7.47e-11!57;UBERON:0003080!9.57e-10!42;UBERON:0002020!1.45e-09!34;UBERON:0003528!1.45e-09!34;UBERON:0002780!2.53e-09!41;UBERON:0001890!2.53e-09!41;UBERON:0006240!2.53e-09!41;UBERON:0002616!4.36e-09!59;UBERON:0001893!4.86e-09!34;UBERON:0002405!6.29e-09!115;UBERON:0002791!7.36e-09!33;UBERON:0003081!1.38e-08!216;UBERON:0001869!1.79e-08!32;UBERON:0002619!3.67e-08!22;UBERON:0000479!7.02e-08!787;UBERON:0001017!8.08e-08!82;UBERON:0000955!1.32e-07!69;UBERON:0006238!1.32e-07!69;UBERON:0000468!1.92e-07!659;UBERON:0005743!2.35e-07!86;UBERON:0001950!2.82e-07!20;UBERON:0000956!8.52e-07!25;UBERON:0000203!8.52e-07!25;UBERON:0000073!8.52e-07!94;UBERON:0001016!8.52e-07!94;UBERON:0000467!9.91e-07!625 | |ontology_enrichment_uberon=UBERON:0007023!2.33e-16!115;UBERON:0002371!1.78e-15!80;UBERON:0002204!4.41e-14!167;UBERON:0002390!2.59e-13!102;UBERON:0003061!2.59e-13!102;UBERON:0001474!9.51e-13!86;UBERON:0004765!1.15e-12!101;UBERON:0001434!1.15e-12!101;UBERON:0002193!9.61e-12!112;UBERON:0001049!7.47e-11!57;UBERON:0005068!7.47e-11!57;UBERON:0006241!7.47e-11!57;UBERON:0007135!7.47e-11!57;UBERON:0003080!9.57e-10!42;UBERON:0002020!1.45e-09!34;UBERON:0003528!1.45e-09!34;UBERON:0002780!2.53e-09!41;UBERON:0001890!2.53e-09!41;UBERON:0006240!2.53e-09!41;UBERON:0002616!4.36e-09!59;UBERON:0001893!4.86e-09!34;UBERON:0002405!6.29e-09!115;UBERON:0002791!7.36e-09!33;UBERON:0003081!1.38e-08!216;UBERON:0001869!1.79e-08!32;UBERON:0002619!3.67e-08!22;UBERON:0000479!7.02e-08!787;UBERON:0001017!8.08e-08!82;UBERON:0000955!1.32e-07!69;UBERON:0006238!1.32e-07!69;UBERON:0000468!1.92e-07!659;UBERON:0005743!2.35e-07!86;UBERON:0001950!2.82e-07!20;UBERON:0000956!8.52e-07!25;UBERON:0000203!8.52e-07!25;UBERON:0000073!8.52e-07!94;UBERON:0001016!8.52e-07!94;UBERON:0000467!9.91e-07!625 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,8.89e-34,76;UBERON:0001474,3.64e-30,82;UBERON:0002390,3.57e-26,98;UBERON:0003061,3.57e-26,98;UBERON:0002405,3.71e-26,93;UBERON:0004765,4.08e-26,90;UBERON:0001434,1.41e-24,100;UBERON:0002193,1.68e-23,108;UBERON:0002204,2.97e-19,167;UBERON:0003081,4.09e-16,203;UBERON:0000926,9.23e-10,315;UBERON:0004120,9.23e-10,315;UBERON:0006603,9.23e-10,315;UBERON:0002384,5.12e-07,371;UBERON:0000923,5.28e-07,560;UBERON:0010316,5.28e-07,560;UBERON:0005291,5.28e-07,560;UBERON:0006598,5.28e-07,560;UBERON:0010317,5.28e-07,560;UBERON:0002532,5.28e-07,560;UBERON:0002050,9.17e-07,564 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0.422863212287913,2.00146596706261,0,0.872338524100369,0,0,0,0,0,0,0.263766978228454,0.123766352960047,0,1.34465029290355,0,1.46062018077475,0.487932798790507,0,0,0,0,0.136874425072884,0,0,0,0,0.393364276848904,0.383829398097213,0.464448369948228,0,0,0,0,0,1.17440175733939,1.66198622559563,0.601633342410425,0.868043482863407,10.5240272892764,10.6884909786263,10.3030227053675,12.5042485350426,14.7371618038636,11.6440349370152,16.967319694115,20.5583944010913,10.2203102395384,9.20615655430881,8.45330331546032,5.67557351732605,3.44745680736619,5.16387746867061,9.47985406160392,12.8004790888971,13.9182136529501,8.98893937780339,8.26426509401437,9.30694178520671,3.83602275479425,10.5552416059749,11.9678194572979,8.95071976118658,8.70627715885752,14.1846306172785,9.9651559839292,9.54744927975624,4.69334626578181,3.04064382587163,11.502590550034,7.36555271975129,6.64571013625857,0.211255286311942,0.212604299965044,0,0.22465726229299,0.300353785683013,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,1.32171328579026,0.560508562981536,1.84368859342554,0,0,0,0,0,0,0,0,0,0,0,0.128091319725675,0.390178042679635,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0.670700859703636,0.12786256184353,2.89151321907653,4.51204119572301,4.05570253090306,1.5905718941022,2.43317435151318,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,1.62273696827342,0.522389211897802,2.39324328933957,0,0,0,0.198762407366705,0,0.694281003215189,0,0,0,0.208994966536811,0.258416759169329,0,0,0,0,0,0.735326160691737,0,0,0,0,0,0,0.183201743930407,0,0,0,0.496971951695318,0.25326102332916,2.1185468930115,0.573673241497627,1.41867352879343,0,0,0.24666754841716,0,2.69421344139376,2.94231425604226,0.151357427644931,0,0,0.624320153660641,0,0.448346041655403,0,0,0,0.408308342509787,0,0,0,0,0,0,0,0,0.831192346452549,0.438977620880838,0,0.300476117813194,1.58805056424029,0.179389635688862,0.427114777637135,0,0.600182192168805,0.103052529238439,0.257640540045629,0.37223371266318,0.843881661206331,0.292311015483596,0,0,0,0.355009592516614,0.10075209822764,0,0.773043412653187,0.818238361772504,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0,0,0,0.721879481669586,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,1.03993478527958,0,0.231860809950154,0,0,0,0.190254152234598,0,0,19.204926474817,19.8903625368352,21.5515185318656,0.93733833986777,0.503946384596579,0,0,0,0,0,0.44024217006613,0,0.576479813667846,0,0,0,0,0,0,0,0,0,0,0.07333828582095,0.517086863031111,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,5.12446941001296,0,3.69900067373611,14.5948536769429,15.5699698343959,12.6500363689819,0,0,0,2.75084482668401,3.08214483825575,2.86497541183833,0,0,0,0,0,0,0,0.335032530668698,0,0.749007023947182,0,0,0.24538298343828,0.500170521059677,0,0,0,0.157702415033935,0.234282829985426,0,0,1.03473071292505,0,0.184369168541703,0.347534457872331,0,0,0.413536052245775,0,0.106727557803444,0,0,0,0.496215615637554,0.306923946576125,0.841980283299221,0.896974044789907,1.02341449813341,0.64341568457443,0,0,0.532685175939381,0.98552587216571,1.03850885836724,0.813472649219715,0,0.40101294060657,0,0.34444334449382,0.546273504020151,0.393373244878272,0,0,0,0,0,0,0,0.215915916102139,1.54227252690289,0,0,0,0.831076008928724,0,0.657779629937804,0.261435451024901,0,0.328014645699706,0,0.515205058238611,0,0,0.574265537996172,0,0,0.386682873168488,0,0.307007349452259,0.413509717453592,0.429680979473094,0,0.170453254832202,0.356128142586949,0.165284915360978,0,0,0,0.464845549297286,1.5740617341532,0.6970372701606,0.308033580176089,0,0,0,0.572499546967965,0,0.316379424718726,1.14378116354295,0.511795582622668,0,0,0,0,0.274537029736055,0.824686816419805,0,0,0.421258456238981,0,2.19342140668156,1.05650146756755,0.136499911407986,0.424216295861138,0,1.65409603063837,0,0.438450885253763,0.578775534266688,0,0,0,0,0.286822704408103,0.0982490410131212,0,0,4.01104507065562,3.29294892959902,0,0,0,0.670302275535787,0,0.564862804660675,0,0,0,0,1.01489521846434,0.764637207142375,0,0.238231775457789,0.822724546172388,0,1.08006287447623,0,0,0,0,0,0.144269212976445,0,0,1.79621434289535,0.191505370132367,0,0,1.12318871245384,1.14117339516596,0,0,0.50787533340481,0,0,0,0.343505344755765,0,0,0,0,0,0,1.08182271390393,0.33307196799782,0,0,1.90460633053462,0,0,0,1.43246690842614,0.296964680832639,0.614321404198464,0.994147647766298,1.1253553312841,0,0.988823245360557,0,0.398495976502139,0.828851746593443,0,0,0,0,0.0898683511473268,0,0,0.690503839458535,2.3948309234694,0,0.969332746095218,0.649376687132959,1.99613798001194,0,0.349839999984783,1.44999915086959,0,0.508507300585533,0,0,0,0.173624994933292,0.885741385813839,3.0149109656352,0,0.221158519862449,0,0.438770794307945,0,0,0,0,0,0,0.108647371922008,0.31900115973192,0,0,0,0.31396051279005,0.997270091400938,0.225595660617181,0.588187602953219,0.167821586975843,0,0.317873157960757,0,0,0,0,0,0.265372693510018,1.22206028986725,0,0,0,0.404406797884062,0.8025776472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| ||
|short_description=p6@LHFPL2 | |short_description=p6@LHFPL2 | ||
}} | }} |
Latest revision as of 20:14, 18 September 2015
Short description: | p6@LHFPL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_LHFPL2_5end |
Coexpression cluster: | C392_Monocytederived_CD14_Macrophage_CD14CD16_Dendritic_Eosinophils_migratory |
Association with transcript: | -18bp_to_AK125227_5end |
EntrezGene: | LHFPL2 |
HGNC: | 6588 |
UniProt: | Q6ZUX7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 2.46e-40 | 48 |
phagocyte | 2.46e-40 | 48 |
monopoietic cell | 1.10e-39 | 59 |
monocyte | 1.10e-39 | 59 |
monoblast | 1.10e-39 | 59 |
promonocyte | 1.10e-39 | 59 |
macrophage dendritic cell progenitor | 6.60e-38 | 61 |
granulocyte monocyte progenitor cell | 8.38e-35 | 67 |
myeloid lineage restricted progenitor cell | 6.20e-34 | 66 |
classical monocyte | 2.26e-31 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-31 | 42 |
myeloid leukocyte | 6.64e-30 | 72 |
myeloid cell | 7.09e-20 | 108 |
common myeloid progenitor | 7.09e-20 | 108 |
nongranular leukocyte | 1.22e-13 | 115 |
hematopoietic lineage restricted progenitor cell | 1.50e-12 | 120 |
macrophage | 3.59e-11 | 6 |
leukocyte | 1.17e-09 | 136 |
hematopoietic oligopotent progenitor cell | 7.53e-09 | 161 |
hematopoietic multipotent progenitor cell | 7.53e-09 | 161 |
hematopoietic stem cell | 1.84e-08 | 168 |
mesenchymal cell | 7.33e-08 | 354 |
GAG secreting cell | 1.32e-07 | 9 |
carbohydrate secreting cell | 1.32e-07 | 9 |
hematopoietic cell | 2.03e-07 | 177 |
connective tissue cell | 2.46e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 8.89e-34 | 76 |
bone element | 3.64e-30 | 82 |
hematopoietic system | 3.57e-26 | 98 |
blood island | 3.57e-26 | 98 |
immune system | 3.71e-26 | 93 |
skeletal element | 4.08e-26 | 90 |
skeletal system | 1.41e-24 | 100 |
hemolymphoid system | 1.68e-23 | 108 |
musculoskeletal system | 2.97e-19 | 167 |
lateral plate mesoderm | 4.09e-16 | 203 |
mesoderm | 9.23e-10 | 315 |
mesoderm-derived structure | 9.23e-10 | 315 |
presumptive mesoderm | 9.23e-10 | 315 |
connective tissue | 5.12e-07 | 371 |
germ layer | 5.28e-07 | 560 |
germ layer / neural crest | 5.28e-07 | 560 |
embryonic tissue | 5.28e-07 | 560 |
presumptive structure | 5.28e-07 | 560 |
germ layer / neural crest derived structure | 5.28e-07 | 560 |
epiblast (generic) | 5.28e-07 | 560 |
embryonic structure | 9.17e-07 | 564 |