FFCP PHASE1:Hg19::chr12:51773597..51773612,-: Difference between revisions
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|id=chr12:51773597..51773612,-
|short_description=p5@GALNT6
|description=CAGE_peak_5_at_GALNT6_5end
|association_with_transcript=55bp_to_uc009zma.1_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11226 | |EntrezGene=11226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=4128 | |HGNC=4128 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=55bp_to_uc009zma.1_5end | |||
|cluster_id=chr12:51773597..51773612,- | |||
|coexpression_cluster_id=C64 | |||
|description=CAGE_peak_5_at_GALNT6_5end | |||
|id=chr12:51773597..51773612,- | |||
|ontology_enrichment_celltype=CL:0002274!3.56e-35!5;CL:0000457!3.56e-35!5;CL:0002191!3.56e-35!5;CL:0000097!3.56e-35!5;CL:0000831!3.56e-35!5;CL:0002028!3.56e-35!5;CL:0000163!1.73e-19!9 | |||
|ontology_enrichment_celltype_v019=CL:0000097;5.17e-105;5!CL:0000163;8.65e-59;9!CL:0000151;1.10e-13;36 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,3.03e-105,5;CL:0002028,3.03e-105,5;CL:0000163,6.42e-59,9;CL:0000151,2.65e-15,36;CL:0000839,1.75e-08,66;CL:0000557,2.29e-08,67;CL:0000766,7.95e-08,72;CL:0002031,2.91e-07,120 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:225!7.10e-08!1 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002372!6.19e-08!1;UBERON:0001961!6.19e-08!1;UBERON:0001744!6.19e-08!1;UBERON:0001735!6.19e-08!1;UBERON:0006834!6.63e-08!1;UBERON:0007190!1.14e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002021;6.78e-08;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,7.01e-08,5;UBERON:0002371,1.92e-07,76;UBERON:0001474,6.13e-07,82 | |||
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|short_description=p5@GALNT6 | |||
}} | }} |
Latest revision as of 20:14, 18 September 2015
Short description: | p5@GALNT6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_GALNT6_5end |
Coexpression cluster: | C64_Mast_chronic_acute_immature_chorionic_Basophils_Dendritic |
Association with transcript: | 55bp_to_uc009zma.1_5end |
EntrezGene: | GALNT6 |
HGNC: | 4128 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 3.03e-105 | 5 |
basophil mast progenitor cell | 3.03e-105 | 5 |
endocrine cell | 6.42e-59 | 9 |
secretory cell | 2.65e-15 | 36 |
myeloid lineage restricted progenitor cell | 1.75e-08 | 66 |
granulocyte monocyte progenitor cell | 2.29e-08 | 67 |
myeloid leukocyte | 7.95e-08 | 72 |
hematopoietic lineage restricted progenitor cell | 2.91e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
occipital lobe | 7.01e-08 | 5 |
bone marrow | 1.92e-07 | 76 |
bone element | 6.13e-07 | 82 |