FFCP PHASE1:Hg19::chr3:50378363..50378383,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr3:50378363..50378383,- to FFCP PHASE1:Hg19::chr3:50378363..50378383,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11186 | |EntrezGene=11186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9882 | |HGNC=9882 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS23 | |UniProt=Q9NS23 | ||
|association_with_transcript=0bp_to_NM_001206957,NM_007182,NM_170714,uc003dad.1,uc003dae.1,uc003daf.1,uc010hlk.1,uc011bdq.1_5end | |||
|cluster_id=chr3:50378363..50378383,- | |||
|coexpression_cluster_id=C98 | |||
|description=CAGE_peak_10_at_RASSF1_5end | |||
|id=chr3:50378363..50378383,- | |||
|ontology_enrichment_celltype=CL:0000037!1.97e-30!172;CL:0000566!1.97e-30!172;CL:0000988!4.22e-29!182;CL:0002032!7.55e-29!165;CL:0000837!7.55e-29!165;CL:0002031!6.81e-22!124;CL:0000738!1.31e-20!140;CL:0002087!3.40e-20!119;CL:0000838!1.27e-18!52;CL:0000542!5.52e-18!53;CL:0000051!5.52e-18!53;CL:0000791!4.57e-17!18;CL:0000789!4.57e-17!18;CL:0002420!4.57e-17!18;CL:0002419!4.57e-17!18;CL:0000790!4.57e-17!18;CL:0000084!1.33e-15!25;CL:0000827!1.33e-15!25;CL:0000625!2.91e-12!11;CL:0000763!3.00e-12!112;CL:0000049!3.00e-12!112;CL:0000134!8.02e-11!358;CL:0002320!1.08e-10!365;CL:0000219!1.11e-08!390;CL:0002393!1.39e-07!9;CL:0002397!1.39e-07!9;CL:0000839!6.51e-07!70 | |||
|ontology_enrichment_celltype_v019=CL:0000791;5.79e-33;18!CL:0000789;5.79e-33;18!CL:0002419;5.79e-33;18!CL:0000625;3.52e-31;11!CL:0000084;1.37e-22;25!CL:0000542;3.86e-15;53!CL:0000623;2.72e-10;3!CL:0000097;7.57e-10;5!CL:0000767;1.79e-09;3!CL:0000236;2.57e-09;13!CL:0000226;1.25e-08;3!CL:0000842;1.25e-08;3!CL:0002087;6.94e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000791,5.31e-33,18;CL:0000789,5.31e-33,18;CL:0002420,5.31e-33,18;CL:0002419,5.31e-33,18;CL:0000790,5.31e-33,18;CL:0000625,3.63e-31,11;CL:0000838,3.87e-28,52;CL:0000542,1.80e-27,53;CL:0000051,1.80e-27,53;CL:0000084,1.29e-22,25;CL:0000827,1.29e-22,25;CL:0000738,1.57e-22,136;CL:0000037,4.59e-22,168;CL:0000988,2.35e-20,177;CL:0002032,1.80e-18,161;CL:0000837,1.80e-18,161;CL:0002031,6.09e-18,120;CL:0002087,1.73e-17,115;CL:0000623,2.69e-10,3;CL:0000825,2.69e-10,3;CL:0000097,8.23e-10,5;CL:0002028,8.23e-10,5;CL:0000767,1.83e-09,3;CL:0000226,7.95e-09,3;CL:0000842,7.95e-09,3;CL:0000236,8.75e-09,14;CL:0002320,7.71e-07,361 | |||
|ontology_enrichment_development_v019=CL:0000790;5.79e-33;18!CL:0000051;3.86e-15;53 | |||
|ontology_enrichment_disease=DOID:1240!1.94e-08!39;DOID:8692!2.70e-08!31;DOID:2531!8.86e-07!51;DOID:0060083!8.86e-07!51 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.04e-13!102;UBERON:0003061!2.04e-13!102;UBERON:0002193!8.88e-12!112;UBERON:0000178!3.15e-11!15;UBERON:0000179!3.15e-11!15;UBERON:0000463!3.15e-11!15;UBERON:0002384!3.70e-10!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.32e-20;15!UBERON:0000179;4.32e-20;15!UBERON:0000463;4.32e-20;15!UBERON:0002390;2.14e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,2.88e-20,15;UBERON:0000179,2.88e-20,15;UBERON:0000463,2.88e-20,15;UBERON:0002390,1.36e-08,98;UBERON:0003061,1.36e-08,98;UBERON:0002193,2.57e-07,108 | |||
|phase1_expression=0.181678379270557,0.642301571672949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204000691244253,0,0,0,0,0.0764134057479513,0.0821005894499457,0,3.93364276848904,3.45446458287491,2.47705797305722,0.919421224478927,0,0,0.0774672005803016,0,2.34880351467878,1.10799081706375,1.40381113229099,1.51907609501096,0,1.29557466407592,0.515151135268373,0.581592955118259,0,0.485168122375632,0.232429036905685,0,0,0,0.256160706529101,0.236482229888585,0.344745680736619,0,0,0,0,0,0.612167784741805,0,0,0,0,0,0.290209238628584,0,0,0,0,0.217188844705117,0,0,0,0.422510572623884,0.637812899895131,0.628975936525128,0.112328631146495,0.600707571366025,0.16072558669708,0.285012743741249,1.39241674039363,0.91332076882317,1.75996244461323,0,2.66852776159066,2.98711155796555,0.800791974072025,0.574752439954483,0,1.90810750907073,2.84606484554724,2.34894875748376,2.6759125968766,2.64342657158052,1.12101712596307,1.31692042387539,0.590129310341499,0.393010762749165,1.43921049299656,3.34372990781356,2.60737813306872,0,1.94826728407911,2.78526142212934,2.3568472597987,2.21533894583621,1.62482318259009,1.92136979588513,1.69077151827842,3.12432018746985,5.52700035571697,2.89803085735052,0.14828656316206,0,1.04535523804977,2.71942422474159,0.383220493601921,0,2.53019692019503,4.14135038621326,7.1619179924206,2.85135613334512,3.16207750063323,2.68771883424279,4.99722906209383,2.13099526839615,4.92676798152628,5.64498881029251,6.15112450302067,4.05508330871837,0,0,0,0,0,0.144846518960824,0,0,0,0,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,0,0,0.12663051166458,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0.23486899728753,0.161872944368132,0.280901613404497,0,0,0.103325781175765,1.18800285728205,0,0,0,0,0,0,0,0,0,0,0.358779271377724,0,0,0,0,0,0.18611685633159,0.337552664482532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.56449532329816,0,1.38134921352481,0.464367928031979,0,0,0,0,0,0,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0.4115740113314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144366447761074,0,0,0,0,0.738651018262192,0.234004265139238,0.148631162288728,0,0,0,0,0,0,0.492663237895943,2.55340458638356,3.31724984865235,4.75595846275973,4.29224273649692,0.126995788584338,0,0,0,0.102827492703324,0.600686115687835,0,0,0,0,0,0,0,0,1.04007436911366,0,0,0,0.142977993658148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0,0,1.90544744788996,9.45747648969251,7.33133754522359,9.11235557586213,0,0,0,0,0,0,0,0,0.12269149171914,1.00034104211935,0,0,0,0.157702415033935,0,0.300946099727719,0,0,0,0.184369168541703,0.0868836144680828,0,0,1.86091223510599,1.72571360654893,3.52200940751366,0,0,0,0.496215615637554,0,0.561320188866147,0.384417447767103,0,0.160853921143607,0,0.308419387605311,0,0,0,0.116210378459959,0,0,0,0.229628896329213,0.182091168006717,0.262248829918848,0,0,0,0,0,0,0,0,0,0,0,0,0.831076008928724,0,0.219259876645935,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214840489736547,0,0.170453254832202,0.178064071293475,0,0,0,0,0.464845549297286,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235624804691373,0.202182481573316,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0.443430153536676,0,2.02979043692868,2.29391162142713,3.98753031021914,2.85878130549347,2.87953591160336,3.8908398671563,1.62009431171434,2.37937552888281,0,0,0,0,0,0,0.318852545457645,1.59663497146253,0.957526850661834,0,0.973865820823666,0.842391534340376,0.912938716132769,0.47003968731907,0,0.50787533340481,0.642352300414798,0.605399121573143,0.851692475380653,0.343505344755765,0,0.223676107892416,0.500547425135725,0.19538809540204,0.556812347790485,0,0.270455678475983,1.33228787199128,0,0,0.586032717087576,0,0.66866030566487,0,0,0,0,0,0,0,0,0,0,0.552567831062295,0,0,0,0,0.0898683511473268,0,2.04628948090749,0,0,0,0,0.0927680981618513,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0,0.32681539055697,0,0.153900517007594,0,0,0,0,0,0.0915975934018623,0,0,0.470940769185074,0.664846727600626,0,0.19606253431774,0,0,0.635746315921515,0,0,0,0,0,0.442287822516696,0,0.889563386041866,0.247127877893006,0.104421949505455,0,0.802577647298789,0,0,0,0,0,0,0,0.31593289814244,0,0,0,0,0,0,0,0,0,0,0,0,0.171986032471617,0.0967563312890851,0,0,0,0,0,0,0,0.126621591911757,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0,0,0,0.600420288709789,0.136905378891993,2.55493176133945,0,0.262887354279314,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0.169346664131569,0,0.272406812223151,0,0,0,0,0,0,0,0.0788057072991982,0.209818352539992,0,0,0.191915197319445,0,0,0,0.542999601753713,0,0,0,0,0,0.113312091520126,0,0,0,0.26446520348538,0,0,0.533937062838473,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0.235265819698172,0,0,0,0,0.554805861502613,0,0,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0,0,0,0.400027764663154,0.343395705182793,0,0,0,0,0,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| ||
|short_description=p10@RASSF1 | |||
}} | }} |
Latest revision as of 20:02, 18 September 2015
Short description: | p10@RASSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RASSF1_5end |
Coexpression cluster: | C98_CD8_Natural_Basophils_blood_CD4_Peripheral_Whole |
Association with transcript: | 0bp_to_NM_001206957, NM_007182, NM_170714, uc003dad.1, uc003dae.1, uc003daf.1, uc010hlk.1, uc011bdq.1_5end |
EntrezGene: | RASSF1 |
HGNC: | 9882 |
UniProt: | Q9NS23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mature alpha-beta T cell | 5.31e-33 | 18 |
alpha-beta T cell | 5.31e-33 | 18 |
immature T cell | 5.31e-33 | 18 |
mature T cell | 5.31e-33 | 18 |
immature alpha-beta T cell | 5.31e-33 | 18 |
CD8-positive, alpha-beta T cell | 3.63e-31 | 11 |
lymphoid lineage restricted progenitor cell | 3.87e-28 | 52 |
lymphocyte | 1.80e-27 | 53 |
common lymphoid progenitor | 1.80e-27 | 53 |
T cell | 1.29e-22 | 25 |
pro-T cell | 1.29e-22 | 25 |
leukocyte | 1.57e-22 | 136 |
hematopoietic stem cell | 4.59e-22 | 168 |
hematopoietic cell | 2.35e-20 | 177 |
hematopoietic oligopotent progenitor cell | 1.80e-18 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-18 | 161 |
hematopoietic lineage restricted progenitor cell | 6.09e-18 | 120 |
nongranular leukocyte | 1.73e-17 | 115 |
natural killer cell | 2.69e-10 | 3 |
pro-NK cell | 2.69e-10 | 3 |
mast cell | 8.23e-10 | 5 |
basophil mast progenitor cell | 8.23e-10 | 5 |
basophil | 1.83e-09 | 3 |
single nucleate cell | 7.95e-09 | 3 |
mononuclear cell | 7.95e-09 | 3 |
B cell | 8.75e-09 | 14 |
connective tissue cell | 7.71e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
blood | 2.88e-20 | 15 |
haemolymphatic fluid | 2.88e-20 | 15 |
organism substance | 2.88e-20 | 15 |
hematopoietic system | 1.36e-08 | 98 |
blood island | 1.36e-08 | 98 |
hemolymphoid system | 2.57e-07 | 108 |