FFCP PHASE1:Hg19::chr3:50378235..50378286,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11186 | |EntrezGene=11186 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9882 | |HGNC=9882 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NS23 | |UniProt=Q9NS23 | ||
|association_with_transcript=0bp_to_ENST00000357043,ENST00000395117,ENST00000488024_5end | |association_with_transcript=0bp_to_ENST00000357043,ENST00000395117,ENST00000488024_5end | ||
|cluster_id=chr3:50378235..50378286,- | |||
|description=CAGE_peak_2_at_RASSF1_5end | |description=CAGE_peak_2_at_RASSF1_5end | ||
|id=chr3:50378235..50378286,- | |id=chr3:50378235..50378286,- | ||
|ontology_enrichment_celltype=CL:0000048!1.67e-34!430;CL:0000134!1.66e-33!358;CL:0002320!1.82e-33!365;CL:0000723!2.67e-33!436;CL:0000034!2.16e-32!444;CL:0000219!1.41e-25!390;CL:0000037!1.60e-19!172;CL:0000566!1.60e-19!172;CL:0000988!4.03e-19!182;CL:0002032!1.38e-18!165;CL:0000837!1.38e-18!165;CL:0002371!2.82e-15!591;CL:0000763!7.99e-14!112;CL:0000049!7.99e-14!112;CL:0002031!9.12e-13!124;CL:0000738!9.57e-13!140;CL:0002087!9.02e-12!119;CL:0000144!8.75e-11!625;CL:0000057!1.22e-10!75;CL:0000557!8.35e-09!71;CL:0000766!1.80e-08!76;CL:0000839!3.84e-08!70;CL:0002620!1.64e-07!23;CL:0000055!2.19e-07!180 | |ontology_enrichment_celltype=CL:0000048!1.67e-34!430;CL:0000134!1.66e-33!358;CL:0002320!1.82e-33!365;CL:0000723!2.67e-33!436;CL:0000034!2.16e-32!444;CL:0000219!1.41e-25!390;CL:0000037!1.60e-19!172;CL:0000566!1.60e-19!172;CL:0000988!4.03e-19!182;CL:0002032!1.38e-18!165;CL:0000837!1.38e-18!165;CL:0002371!2.82e-15!591;CL:0000763!7.99e-14!112;CL:0000049!7.99e-14!112;CL:0002031!9.12e-13!124;CL:0000738!9.57e-13!140;CL:0002087!9.02e-12!119;CL:0000144!8.75e-11!625;CL:0000057!1.22e-10!75;CL:0000557!8.35e-09!71;CL:0000766!1.80e-08!76;CL:0000839!3.84e-08!70;CL:0002620!1.64e-07!23;CL:0000055!2.19e-07!180 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.02e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000048,4.81e-35,427;CL:0000723,8.98e-34,433;CL:0000134,1.03e-33,354;CL:0002320,1.15e-33,361;CL:0000034,8.55e-33,441;CL:0000219,2.22e-26,386;CL:0000037,5.85e-18,168;CL:0000988,1.07e-17,177;CL:0002032,6.01e-17,161;CL:0000837,6.01e-17,161;CL:0000763,1.54e-12,108;CL:0000049,1.54e-12,108;CL:0000057,1.57e-11,76;CL:0002031,2.68e-11,120;CL:0000738,2.79e-11,136;CL:0002087,3.38e-10,115;CL:0002620,1.09e-07,23;CL:0000557,1.71e-07,67;CL:0000766,2.42e-07,72;CL:0000839,7.33e-07,66;CL:0000791,9.80e-07,18;CL:0000789,9.80e-07,18;CL:0002420,9.80e-07,18;CL:0002419,9.80e-07,18;CL:0000790,9.80e-07,18 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:8692!2.52e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:8692;3.75e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,1.70e-07,31 | |||
|ontology_enrichment_uberon=UBERON:0002384!1.61e-31!375;UBERON:0002390!7.59e-15!102;UBERON:0003061!7.59e-15!102;UBERON:0002204!5.38e-13!167;UBERON:0002193!2.09e-12!112;UBERON:0002371!2.64e-10!80;UBERON:0003081!3.28e-09!216;UBERON:0004765!1.24e-08!101;UBERON:0001434!1.24e-08!101;UBERON:0001474!1.84e-08!86;UBERON:0000178!3.14e-07!15;UBERON:0000179!3.14e-07!15;UBERON:0000463!3.14e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.12e-07;15!UBERON:0000179;3.12e-07;15!UBERON:0000463;3.12e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,7.73e-32,371;UBERON:0002390,1.85e-13,98;UBERON:0003061,1.85e-13,98;UBERON:0002193,1.48e-11,108;UBERON:0002204,1.99e-11,167;UBERON:0000926,1.71e-09,315;UBERON:0004120,1.71e-09,315;UBERON:0006603,1.71e-09,315;UBERON:0002371,5.60e-09,76;UBERON:0003081,6.36e-09,203;UBERON:0000178,2.13e-07,15;UBERON:0000179,2.13e-07,15;UBERON:0000463,2.13e-07,15;UBERON:0002405,3.30e-07,93;UBERON:0001474,3.62e-07,82;UBERON:0001434,4.20e-07,100 | |||
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|short_description=p2@RASSF1 | |short_description=p2@RASSF1 | ||
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Latest revision as of 20:00, 18 September 2015
Short description: | p2@RASSF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASSF1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000357043, ENST00000395117, ENST00000488024_5end |
EntrezGene: | RASSF1 |
HGNC: | 9882 |
UniProt: | Q9NS23 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 4.81e-35 | 427 |
somatic stem cell | 8.98e-34 | 433 |
mesenchymal cell | 1.03e-33 | 354 |
connective tissue cell | 1.15e-33 | 361 |
stem cell | 8.55e-33 | 441 |
motile cell | 2.22e-26 | 386 |
hematopoietic stem cell | 5.85e-18 | 168 |
hematopoietic cell | 1.07e-17 | 177 |
hematopoietic oligopotent progenitor cell | 6.01e-17 | 161 |
hematopoietic multipotent progenitor cell | 6.01e-17 | 161 |
myeloid cell | 1.54e-12 | 108 |
common myeloid progenitor | 1.54e-12 | 108 |
fibroblast | 1.57e-11 | 76 |
hematopoietic lineage restricted progenitor cell | 2.68e-11 | 120 |
leukocyte | 2.79e-11 | 136 |
nongranular leukocyte | 3.38e-10 | 115 |
skin fibroblast | 1.09e-07 | 23 |
granulocyte monocyte progenitor cell | 1.71e-07 | 67 |
myeloid leukocyte | 2.42e-07 | 72 |
myeloid lineage restricted progenitor cell | 7.33e-07 | 66 |
mature alpha-beta T cell | 9.80e-07 | 18 |
alpha-beta T cell | 9.80e-07 | 18 |
immature T cell | 9.80e-07 | 18 |
mature T cell | 9.80e-07 | 18 |
immature alpha-beta T cell | 9.80e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 7.73e-32 | 371 |
hematopoietic system | 1.85e-13 | 98 |
blood island | 1.85e-13 | 98 |
hemolymphoid system | 1.48e-11 | 108 |
musculoskeletal system | 1.99e-11 | 167 |
mesoderm | 1.71e-09 | 315 |
mesoderm-derived structure | 1.71e-09 | 315 |
presumptive mesoderm | 1.71e-09 | 315 |
bone marrow | 5.60e-09 | 76 |
lateral plate mesoderm | 6.36e-09 | 203 |
blood | 2.13e-07 | 15 |
haemolymphatic fluid | 2.13e-07 | 15 |
organism substance | 2.13e-07 | 15 |
immune system | 3.30e-07 | 93 |
bone element | 3.62e-07 | 82 |
skeletal system | 4.20e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 1.70e-07 | 31 |