FFCP PHASE1:Hg19::chr14:106110903..106110942,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3501 | |EntrezGene=3501 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=5526 | |HGNC=5526 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_BC040042_5end | |association_with_transcript=-8bp_to_BC040042_5end | ||
|cluster_id=chr14:106110903..106110942,- | |||
|coexpression_cluster_id=C3399 | |coexpression_cluster_id=C3399 | ||
|description=CAGE_peak_1_at_IGHG2_5end | |description=CAGE_peak_1_at_IGHG2_5end | ||
|id=chr14:106110903..106110942,- | |id=chr14:106110903..106110942,- | ||
|ontology_enrichment_celltype=CL:0000236!5.06e-32!14;CL:0000945!1.16e-17!24;CL:0000826!1.16e-17!24;CL:0000838!6.56e-07!52;CL:0000542!9.72e-07!53;CL:0000051!9.72e-07!53 | |ontology_enrichment_celltype=CL:0000236!5.06e-32!14;CL:0000945!1.16e-17!24;CL:0000826!1.16e-17!24;CL:0000838!6.56e-07!52;CL:0000542!9.72e-07!53;CL:0000051!9.72e-07!53 | ||
|ontology_enrichment_celltype_v019=CL:0000236;6.12e-45;13!CL:0000945;9.40e-24;24!CL:0000785;3.31e-09;1!CL:0000819;3.31e-09;1!CL:0000542;4.54e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000236,1.11e-41,14;CL:0000945,8.92e-24,24;CL:0000826,8.92e-24,24;CL:0000838,3.05e-10,52;CL:0000542,5.05e-10,53;CL:0000051,5.05e-10,53;CL:0000819,3.31e-09,1 | |||
|ontology_enrichment_development_v019=UBERON:0006965;9.86e-16;2!UBERON:0004872;3.83e-10;7!UBERON:0001045;4.02e-09;1!CL:0000051;4.54e-09;53!UBERON:0006298;4.88e-09;1!UBERON:0006242;1.37e-08;1 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060073;3.31e-09;1!DOID:8675;3.31e-09;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,3.31e-09,1;DOID:8675,3.31e-09,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.62e-30!115 | |ontology_enrichment_uberon=UBERON:0007023!7.62e-30!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0000029;3.06e-09;1!UBERON:0002372;3.58e-09;1!UBERON:0001961;3.58e-09;1!UBERON:0001744;3.58e-09;1!UBERON:0001042;3.58e-09;1!UBERON:0001735;3.58e-09;1!UBERON:0001154;4.02e-09;1!UBERON:0001153;4.02e-09;1!UBERON:0009854;4.02e-09;1!UBERON:0001736;4.88e-09;1!UBERON:0002171;1.37e-08;1!UBERON:0006518;1.37e-08;1!UBERON:0008949;1.37e-08;1!UBERON:0000101;1.37e-08;1!UBERON:0002167;1.37e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.42e-15,114;UBERON:0000029,3.06e-09,1;UBERON:0002372,3.58e-09,1;UBERON:0001961,3.58e-09,1;UBERON:0001744,3.58e-09,1;UBERON:0001735,3.58e-09,1;UBERON:0001154,3.87e-09,1;UBERON:0001153,3.87e-09,1;UBERON:0001045,3.87e-09,1;UBERON:0001736,5.28e-09,1;UBERON:0006298,5.28e-09,1;UBERON:0002171,1.05e-08,1;UBERON:0006518,1.05e-08,1;UBERON:0008949,1.05e-08,1;UBERON:0000101,1.05e-08,1;UBERON:0002167,1.05e-08,1 | |||
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| ||
|short_description=p1@IGHG2 | |short_description=p1@IGHG2 | ||
}} | }} |
Latest revision as of 20:00, 18 September 2015
Short description: | p1@IGHG2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_IGHG2_5end |
Coexpression cluster: | C3399_diffuse_lymph_tonsil_appendix_CD19_submaxillary_blood |
Association with transcript: | -8bp_to_BC040042_5end |
EntrezGene: | IGHG2 |
HGNC: | 5526 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
B cell | 1.11e-41 | 14 |
lymphocyte of B lineage | 8.92e-24 | 24 |
pro-B cell | 8.92e-24 | 24 |
lymphoid lineage restricted progenitor cell | 3.05e-10 | 52 |
lymphocyte | 5.05e-10 | 53 |
common lymphoid progenitor | 5.05e-10 | 53 |
B-1 B cell | 3.31e-09 | 1 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.42e-15 | 114 |
lymph node | 3.06e-09 | 1 |
tonsil | 3.58e-09 | 1 |
mucosa-associated lymphoid tissue | 3.58e-09 | 1 |
lymphoid tissue | 3.58e-09 | 1 |
tonsillar ring | 3.58e-09 | 1 |
vermiform appendix | 3.87e-09 | 1 |
caecum | 3.87e-09 | 1 |
midgut | 3.87e-09 | 1 |
submandibular gland | 5.28e-09 | 1 |
submandibular gland primordium | 5.28e-09 | 1 |
lower lobe of right lung | 1.05e-08 | 1 |
right lung lobe | 1.05e-08 | 1 |
lower lobe of lung | 1.05e-08 | 1 |
lobe of lung | 1.05e-08 | 1 |
right lung | 1.05e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 3.31e-09 | 1 |
lymphosarcoma | 3.31e-09 | 1 |