FFCP PHASE1:Hg19::chr17:16318909..16318928,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51393 | |EntrezGene=51393 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18082 | |HGNC=18082 | ||
|TSSclassifier=strong | |||
|UniProt=Q9Y5S1 | |UniProt=Q9Y5S1 | ||
|association_with_transcript=21bp_to_ENST00000338560,ENST00000489668,uc002gpy.2,uc002gpz.2_5end | |association_with_transcript=21bp_to_ENST00000338560,ENST00000489668,uc002gpy.2,uc002gpz.2_5end | ||
|cluster_id=chr17:16318909..16318928,+ | |||
|description=CAGE_peak_3_at_TRPV2_5end | |description=CAGE_peak_3_at_TRPV2_5end | ||
|id=chr17:16318909..16318928,+ | |id=chr17:16318909..16318928,+ | ||
|ontology_enrichment_celltype=CL:0000048!1.67e-26!430;CL:0000723!1.45e-24!436;CL:0002371!8.01e-24!591;CL:0000034!1.21e-22!444;CL:0000144!2.66e-19!625;CL:0002320!2.52e-17!365;CL:0000055!8.83e-17!180;CL:0000134!6.19e-16!358;CL:0000219!1.13e-15!390;CL:0000183!1.92e-12!59;CL:0000680!6.20e-12!57;CL:0000056!6.20e-12!57;CL:0000355!6.20e-12!57;CL:0000187!1.11e-10!54;CL:0000222!2.09e-10!119;CL:0000192!3.48e-09!42;CL:0000514!3.48e-09!42;CL:0000548!1.52e-08!679;CL:0000004!1.52e-08!679;CL:0000255!1.52e-08!679;CL:0000012!3.90e-08!682;CL:0000057!9.36e-08!75;CL:0000839!1.59e-07!70;CL:0000393!1.75e-07!60;CL:0000211!1.75e-07!60;CL:0000557!3.26e-07!71 | |ontology_enrichment_celltype=CL:0000048!1.67e-26!430;CL:0000723!1.45e-24!436;CL:0002371!8.01e-24!591;CL:0000034!1.21e-22!444;CL:0000144!2.66e-19!625;CL:0002320!2.52e-17!365;CL:0000055!8.83e-17!180;CL:0000134!6.19e-16!358;CL:0000219!1.13e-15!390;CL:0000183!1.92e-12!59;CL:0000680!6.20e-12!57;CL:0000056!6.20e-12!57;CL:0000355!6.20e-12!57;CL:0000187!1.11e-10!54;CL:0000222!2.09e-10!119;CL:0000192!3.48e-09!42;CL:0000514!3.48e-09!42;CL:0000548!1.52e-08!679;CL:0000004!1.52e-08!679;CL:0000255!1.52e-08!679;CL:0000012!3.90e-08!682;CL:0000057!9.36e-08!75;CL:0000839!1.59e-07!70;CL:0000393!1.75e-07!60;CL:0000211!1.75e-07!60;CL:0000557!3.26e-07!71 | ||
|ontology_enrichment_celltype_v019=CL:0000134;5.19e-08;55!CL:0000723;2.33e-07;61!CL:0000048;5.70e-07;58!CL:0000192;9.48e-07;43 | |ontology_enrichment_celltype_v019=CL:0000134;5.19e-08;55!CL:0000723;2.33e-07;61!CL:0000048;5.70e-07;58!CL:0000192;9.48e-07;43 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,3.62e-28,427;CL:0000723,1.43e-26,433;CL:0000034,1.55e-24,441;CL:0002320,1.12e-17,361;CL:0000219,6.23e-17,386;CL:0000134,2.28e-16,354;CL:0000680,7.17e-13,58;CL:0000056,7.17e-13,58;CL:0000355,7.17e-13,58;CL:0000187,1.94e-11,55;CL:0000222,2.06e-10,121;CL:0000192,3.28e-10,43;CL:0000514,3.28e-10,43;CL:0000393,8.62e-09,61;CL:0000211,8.62e-09,61;CL:0000057,1.53e-08,76;CL:0000839,4.87e-07,66 | |||
|ontology_enrichment_development_v019=CL:0000355;4.66e-07;58!CL:0000514;9.48e-07;43 | |ontology_enrichment_development_v019=CL:0000355;4.66e-07;58!CL:0000514;9.48e-07;43 | ||
|ontology_enrichment_disease=DOID:2394!6.29e-07!14 | |ontology_enrichment_disease=DOID:2394!6.29e-07!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;2.94e-08;14 | |ontology_enrichment_disease_v019=DOID:2394;2.94e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:2394,3.66e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002384!6.63e-17!375;UBERON:0003081!8.80e-16!216;UBERON:0002204!1.78e-15!167;UBERON:0004290!2.39e-13!70;UBERON:0000914!3.68e-11!83;UBERON:0002329!3.68e-11!83;UBERON:0003077!3.68e-11!83;UBERON:0003059!3.68e-11!83;UBERON:0007282!3.68e-11!83;UBERON:0009618!3.68e-11!83;UBERON:0007285!3.68e-11!83;UBERON:0001134!5.37e-11!61;UBERON:0002036!5.37e-11!61;UBERON:0003082!5.37e-11!61;UBERON:0002385!9.99e-11!63;UBERON:0001015!9.99e-11!63;UBERON:0000383!9.99e-11!63;UBERON:0004535!1.01e-10!110;UBERON:0001009!1.42e-10!113;UBERON:0000486!7.57e-10!82;UBERON:0004872!1.69e-09!84;UBERON:0002193!2.08e-09!112;UBERON:0002371!3.15e-09!80;UBERON:0002390!7.88e-09!102;UBERON:0003061!7.88e-09!102;UBERON:0002049!1.50e-08!79;UBERON:0007798!1.50e-08!79;UBERON:0002405!1.34e-07!115;UBERON:0000055!1.67e-07!69;UBERON:0001474!2.87e-07!86;UBERON:0000926!8.35e-07!448;UBERON:0004120!8.35e-07!448;UBERON:0006603!8.35e-07!448 | |ontology_enrichment_uberon=UBERON:0002384!6.63e-17!375;UBERON:0003081!8.80e-16!216;UBERON:0002204!1.78e-15!167;UBERON:0004290!2.39e-13!70;UBERON:0000914!3.68e-11!83;UBERON:0002329!3.68e-11!83;UBERON:0003077!3.68e-11!83;UBERON:0003059!3.68e-11!83;UBERON:0007282!3.68e-11!83;UBERON:0009618!3.68e-11!83;UBERON:0007285!3.68e-11!83;UBERON:0001134!5.37e-11!61;UBERON:0002036!5.37e-11!61;UBERON:0003082!5.37e-11!61;UBERON:0002385!9.99e-11!63;UBERON:0001015!9.99e-11!63;UBERON:0000383!9.99e-11!63;UBERON:0004535!1.01e-10!110;UBERON:0001009!1.42e-10!113;UBERON:0000486!7.57e-10!82;UBERON:0004872!1.69e-09!84;UBERON:0002193!2.08e-09!112;UBERON:0002371!3.15e-09!80;UBERON:0002390!7.88e-09!102;UBERON:0003061!7.88e-09!102;UBERON:0002049!1.50e-08!79;UBERON:0007798!1.50e-08!79;UBERON:0002405!1.34e-07!115;UBERON:0000055!1.67e-07!69;UBERON:0001474!2.87e-07!86;UBERON:0000926!8.35e-07!448;UBERON:0004120!8.35e-07!448;UBERON:0006603!8.35e-07!448 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
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|phase1_expression=4.90531624030503,1.71280419112787,4.93340414335899,1.0007329835313,0.446961094427288,0,2.53299878168311,10.1075179748293,0.522371256399677,1.22866968250754,0.697801167972428,0,0,1.36142988256051,1.98838425436749,6.05092631806598,5.42425075221579,6.57279081348636,3.41552959153355,5.54044761345546,5.30401797235058,1.25381888591235,0.572471974262113,0.273748850145768,1.63205431473244,5.11969818511273,5.17233713534658,3.62069594042925,0.786728553697808,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,2.27470771979874,0,1.66198622559563,0.802177789880567,1.95309783644267,1.11957737119962,2.26725566213286,1.28787783817093,2.18097358169347,1.88937971844405,1.94067248950253,1.85943229524548,1.6446715520873,1.54853185447552,1.43846196161075,0.768482119587302,1.18241114944293,0.689491361473237,0.645484683583826,1.35426486594342,2.07066573496865,3.82068610080984,2.47195832889593,1.22433556948361,4.49300637906531,1.27867425159808,0.659702600373432,2.79249120670285,3.40979800426155,1.7412554317715,2.26954089876456,1.86846674698672,2.26123798731069,1.5644487552606,0.868755378820466,0,1.10483290796269,0.316462387440884,2.32380814943136,1.06302149982522,1.46761051855863,1.01095768031846,1.05123824989054,0.964353520182481,0.855038231223746,1.19350006319454,1.0959849225878,0,0,0,0.853460445133014,0,1.14950487990897,0,0,0,1.17447437874188,0,0,0.560508562981536,0,0.196709770113833,0,0.205601498999509,0.83593247695339,0,0,0,0.445641827540694,0,0,0.541607727530031,0.25618263945135,1.43065282315866,1.15106533222573,0.552700035571697,1.73881851441031,0,0,0,1.0197840842781,0,0,0,0,0.651083453856419,0,0.150575119077773,0.639933055772092,0,0.236777252044017,0,0.201606743224732,0.534880391567015,0.144824403882799,7.31420598941885,2.68280343881454,2.30152611318355,3.2529523714611,2.50668955317945,1.01392563272577,2.3858578411533,0.973269740605272,0.661743720148475,2.21729397462564,0.614843499851882,1.37528029272598,0,0,60.3658152197711,59.5523701563494,55.177553615329,0.238490624305342,0,0,1.59009925893364,4.30117297553062,3.12426451446835,0,2.51699661725944,4.67700671298115,1.67195973229448,0.775250277507987,1.42306505074684,0.33472061276467,3.22263453687318,3.80136052859256,3.66093086322254,2.20597848207521,0.81014194788176,0.625098097988558,0.44905874525234,0.563057402416611,1.53316637465883,3.79706263827252,0.366403487860815,3.9534125230819,0,0,0.993943903390637,1.39293562831038,7.94455084879313,0.286836620748814,1.06400514659507,4.48542080113846,26.6872489324262,4.44001587150888,1.24484414159907,7.67850830797222,4.57693328717684,0.756787138224657,0,1.87457145467037,3.43376084513353,6.27519003698894,8.36912611090086,1.76151747965647,1.13311061057692,0.702254033511242,16.9447962141561,3.80786383666481,6.19954687054593,0,1.7308685049499,6.37112953356618,25.8702531053846,1.5150250255866,0.500474079487857,18.0091675064719,0,0.919463387397059,0.45071417671979,5.78504134116107,6.99619579186562,1.49490172172997,1.90738711043606,18.0054657650641,2.78241828943785,3.34932702059318,2.41951913231067,3.03797398034279,0.292311015483596,5.3011092591264,1.74894807420369,0.323292113637624,9.9402685904652,3.62707553619505,1.86516651541536,0,0,0,0,0,0.69716365721711,0.10366105501537,0,0,14.0804579096834,6.43240938192885,77.3555559573891,1.39310378409594,0.721879481669586,0,0,0,0,0,0,0,0,0,2.21446636387394,11.2193419042757,0.4115740113314,2.94017422771084,0,0,0.590789906681404,0,0,4.63233087806019,0,0,0,0.277765335475589,1.62904152655162,19.758760920312,1.44331342025273,0.231860809950154,3.05262605013136,2.16549671641611,2.31492756288305,0.761016608938393,0,0,5.90920814609754,39.7807250736704,22.7405678301754,0,0,0.283550194484773,0,0,0,11.3312544716067,14.9682337822484,13.4763275101502,13.2590357143605,15.5278193114447,35.6223186979068,58.0622406848582,94.9461322401381,68.4289784090821,20.1541885698514,47.7545461971829,19.7220238515099,3.25180144601546,1.30788020649984,2.2001485746285,5.42941206182667,32.1890801266694,18.596660556232,2.92531928243358,8.32059495290929,15.9468572042528,5.67396528093113,18.3831303521109,0.142977993658148,4.88359444852299,0,20.847115794799,0,2.37585561880029,2.41151501647669,0.871533458600294,2.39935178836937,18.2435670961786,7.03159928004977,23.1917333431335,0,0,7.13184525203592,6.65994010670864,8.83548186966649,10.9227187576336,2.01753259188349,0.197030760201927,1.2937654491571,0.77005821767849,0,0,0,0,0,0.749007023947182,0,1.65766205374414,0.736148950314839,3.00102312635806,5.15403545029498,0.623912584592421,0.892144943985809,2.68094105557689,1.99140405487612,2.10662269809403,6.82222512167955,2.0694614258501,2.65690239414175,6.26855173041791,3.5622281931914,8.41944977089785,5.14715135716284,0.206768026122887,0.647142602455851,0.533637789017222,0,1.66435439510497,0,2.48107807818777,4.45039722535381,1.68396056659844,4.61300937320523,3.07024349440022,1.28683136914886,0,13.2620336670284,10.4761417934745,18.3964829470932,13.5006151587741,23.4744964489118,0,0,0,7.23331023437022,14.021019936517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| ||
|short_description=p3@TRPV2 | |short_description=p3@TRPV2 | ||
}} | }} |
Latest revision as of 19:51, 18 September 2015
Short description: | p3@TRPV2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRPV2_5end |
Coexpression cluster: | NA |
Association with transcript: | 21bp_to_ENST00000338560, ENST00000489668, uc002gpy.2, uc002gpz.2_5end |
EntrezGene: | TRPV2 |
HGNC: | 18082 |
UniProt: | Q9Y5S1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 3.62e-28 | 427 |
somatic stem cell | 1.43e-26 | 433 |
stem cell | 1.55e-24 | 441 |
connective tissue cell | 1.12e-17 | 361 |
motile cell | 6.23e-17 | 386 |
mesenchymal cell | 2.28e-16 | 354 |
muscle precursor cell | 7.17e-13 | 58 |
myoblast | 7.17e-13 | 58 |
multi-potent skeletal muscle stem cell | 7.17e-13 | 58 |
muscle cell | 1.94e-11 | 55 |
mesodermal cell | 2.06e-10 | 121 |
smooth muscle cell | 3.28e-10 | 43 |
smooth muscle myoblast | 3.28e-10 | 43 |
electrically responsive cell | 8.62e-09 | 61 |
electrically active cell | 8.62e-09 | 61 |
fibroblast | 1.53e-08 | 76 |
myeloid lineage restricted progenitor cell | 4.87e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 9.89e-20 | 315 |
mesoderm-derived structure | 9.89e-20 | 315 |
presumptive mesoderm | 9.89e-20 | 315 |
connective tissue | 1.62e-17 | 371 |
epithelial vesicle | 7.42e-16 | 78 |
musculoskeletal system | 7.39e-15 | 167 |
lateral plate mesoderm | 7.39e-15 | 203 |
somite | 3.22e-14 | 71 |
presomitic mesoderm | 3.22e-14 | 71 |
presumptive segmental plate | 3.22e-14 | 71 |
dermomyotome | 3.22e-14 | 71 |
trunk paraxial mesoderm | 3.22e-14 | 71 |
paraxial mesoderm | 9.98e-14 | 72 |
presumptive paraxial mesoderm | 9.98e-14 | 72 |
dense mesenchyme tissue | 2.97e-13 | 73 |
skeletal muscle tissue | 7.34e-12 | 62 |
striated muscle tissue | 7.34e-12 | 62 |
myotome | 7.34e-12 | 62 |
multilaminar epithelium | 4.41e-11 | 83 |
muscle tissue | 6.06e-11 | 64 |
musculature | 6.06e-11 | 64 |
musculature of body | 6.06e-11 | 64 |
bone marrow | 6.17e-09 | 76 |
immune system | 1.42e-08 | 93 |
splanchnic layer of lateral plate mesoderm | 2.55e-08 | 83 |
cardiovascular system | 5.95e-08 | 109 |
hematopoietic system | 6.99e-08 | 98 |
blood island | 6.99e-08 | 98 |
trunk mesenchyme | 7.16e-08 | 122 |
circulatory system | 8.70e-08 | 112 |
hemolymphoid system | 1.06e-07 | 108 |
bone element | 4.07e-07 | 82 |
skeletal element | 9.56e-07 | 90 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 3.66e-08 | 14 |