FFCP PHASE1:Hg19::chr19:46476654..46476725,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4858 | |EntrezGene=4858 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7887 | |HGNC=7887 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UNW9 | |UniProt=Q9UNW9 | ||
|association_with_transcript=0bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | |association_with_transcript=0bp_to_ENST00000263257,NM_002516,uc002pdv.2_5end | ||
|cluster_id=chr19:46476654..46476725,- | |||
|coexpression_cluster_id=C3 | |||
|description=CAGE_peak_2_at_NOVA2_5end | |description=CAGE_peak_2_at_NOVA2_5end | ||
|id=chr19:46476654..46476725,- | |id=chr19:46476654..46476725,- | ||
|ontology_enrichment_celltype=CL:0002139!3.10e-22!24;CL:0000115!1.53e-18!35;CL:0000071!7.61e-18!18;CL:0002546!7.61e-18!18;CL:0002078!9.92e-13!44;CL:1000413!2.58e-09!9;CL:0000213!1.95e-08!57;CL:0000215!1.95e-08!57;CL:0000047!5.12e-08!8;CL:0002543!3.22e-07!6 | |ontology_enrichment_celltype=CL:0002139!3.10e-22!24;CL:0000115!1.53e-18!35;CL:0000071!7.61e-18!18;CL:0002546!7.61e-18!18;CL:0002078!9.92e-13!44;CL:1000413!2.58e-09!9;CL:0000213!1.95e-08!57;CL:0000215!1.95e-08!57;CL:0000047!5.12e-08!8;CL:0002543!3.22e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;5.51e-32;24!CL:0000071;2.82e-29;18!CL:0000115;2.70e-23;36!CL:0002078;1.17e-14;45!CL:1000413;3.03e-13;9!CL:0002543;2.56e-12;6!CL:0000213;5.44e-10;58!CL:0000215;5.44e-10;58!CL:0002544;7.31e-08;6!CL:0002144;3.61e-07;3!CL:0002618;5.94e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,6.56e-32,24;CL:0000071,2.55e-29,18;CL:0002546,2.55e-29,18;CL:0000115,1.52e-28,36;CL:0002078,2.12e-21,45;CL:0000213,4.67e-15,58;CL:0000215,4.67e-15,58;CL:1000413,2.18e-13,9;CL:0002543,3.33e-12,6;CL:0002544,4.38e-08,6;CL:0002144,3.66e-07,3;CL:0002618,8.30e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002546;2.82e-29;18!UBERON:0006601;5.68e-10;82!UBERON:0006215;2.35e-07;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001017!3.09e-56!82;UBERON:0005743!3.75e-54!86;UBERON:0000073!9.96e-53!94;UBERON:0001016!9.96e-53!94;UBERON:0001049!1.17e-48!57;UBERON:0005068!1.17e-48!57;UBERON:0006241!1.17e-48!57;UBERON:0007135!1.17e-48!57;UBERON:0007023!2.62e-45!115;UBERON:0000955!1.59e-44!69;UBERON:0006238!1.59e-44!69;UBERON:0000025!2.85e-41!194;UBERON:0003080!7.16e-41!42;UBERON:0002616!2.80e-40!59;UBERON:0002780!8.70e-40!41;UBERON:0001890!8.70e-40!41;UBERON:0006240!8.70e-40!41;UBERON:0004111!1.58e-36!241;UBERON:0001893!6.90e-34!34;UBERON:0002020!9.88e-34!34;UBERON:0003528!9.88e-34!34;UBERON:0002791!1.06e-32!33;UBERON:0003075!1.55e-32!86;UBERON:0007284!1.55e-32!86;UBERON:0001869!2.88e-32!32;UBERON:0002346!3.69e-31!90;UBERON:0000477!9.61e-30!286;UBERON:0003056!1.34e-25!61;UBERON:0000956!3.41e-25!25;UBERON:0000203!3.41e-25!25;UBERON:0002619!1.73e-23!22;UBERON:0004121!3.98e-23!169;UBERON:0000924!1.21e-22!173;UBERON:0006601!1.21e-22!173;UBERON:0001950!1.04e-21!20;UBERON:0000153!1.12e-21!129;UBERON:0007811!1.12e-21!129;UBERON:0000033!2.38e-21!123;UBERON:0000483!4.53e-18!309;UBERON:0001986!7.61e-18!18;UBERON:0004638!7.61e-18!18;UBERON:0004852!7.61e-18!18;UBERON:0000119!1.47e-17!312;UBERON:0000055!1.74e-17!69;UBERON:0001981!3.62e-15!60;UBERON:0007500!3.62e-15!60;UBERON:0004537!3.62e-15!60;UBERON:0006965!3.62e-15!60;UBERON:0000468!2.54e-14!659;UBERON:0004872!7.61e-14!84;UBERON:0002049!1.78e-13!79;UBERON:0007798!1.78e-13!79;UBERON:0000487!2.09e-13!22;UBERON:0000467!1.05e-12!625;UBERON:0000922!1.15e-12!612;UBERON:0000480!1.33e-12!626;UBERON:0006914!4.77e-11!25;UBERON:0001009!6.26e-11!113;UBERON:0002050!3.16e-10!605;UBERON:0005423!3.16e-10!605;UBERON:0000923!6.61e-10!604;UBERON:0005291!6.61e-10!604;UBERON:0006598!6.61e-10!604;UBERON:0002532!6.61e-10!604;UBERON:0002308!6.67e-10!9;UBERON:0000125!6.67e-10!9;UBERON:0004535!7.51e-10!110;UBERON:0002420!8.83e-10!9;UBERON:0007245!8.83e-10!9;UBERON:0010009!8.83e-10!9;UBERON:0010011!8.83e-10!9;UBERON:0000454!8.83e-10!9;UBERON:0003915!2.58e-09!9;UBERON:0004700!2.58e-09!9;UBERON:0001917!2.58e-09!9;UBERON:0003076!3.26e-09!15;UBERON:0003057!3.26e-09!15;UBERON:0001637!5.57e-09!42;UBERON:0003509!5.57e-09!42;UBERON:0004572!5.57e-09!42;UBERON:0003914!7.55e-09!118;UBERON:0000200!2.29e-08!6;UBERON:0009663!5.18e-08!7;UBERON:0004573!9.88e-08!33;UBERON:0004571!9.88e-08!33;UBERON:0001871!1.00e-07!7;UBERON:0000064!1.48e-07!219;UBERON:0004732!1.49e-07!13;UBERON:0001894!3.10e-07!7;UBERON:0006222!3.10e-07!7;UBERON:0000475!3.26e-07!365;UBERON:0002021!4.53e-07!5;UBERON:0000947!4.70e-07!21;UBERON:0010191!4.70e-07!21;UBERON:0001872!5.04e-07!5;UBERON:0002298!5.94e-07!8;UBERON:0004733!8.64e-07!12;UBERON:0002028!8.64e-07!12;UBERON:0007277!8.64e-07!12 | |||
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| ||
|short_description=p2@NOVA2 | |short_description=p2@NOVA2 | ||
}} | }} |
Latest revision as of 19:44, 18 September 2015
Short description: | p2@NOVA2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_NOVA2_5end |
Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
Association with transcript: | 0bp_to_ENST00000263257, NM_002516, uc002pdv.2_5end |
EntrezGene: | NOVA2 |
HGNC: | 7887 |
UniProt: | Q9UNW9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 6.56e-32 | 24 |
blood vessel endothelial cell | 2.55e-29 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.55e-29 | 18 |
endothelial cell | 1.52e-28 | 36 |
meso-epithelial cell | 2.12e-21 | 45 |
lining cell | 4.67e-15 | 58 |
barrier cell | 4.67e-15 | 58 |
endothelial cell of artery | 2.18e-13 | 9 |
vein endothelial cell | 3.33e-12 | 6 |
aortic endothelial cell | 4.38e-08 | 6 |
capillary endothelial cell | 3.66e-07 | 3 |
endothelial cell of umbilical vein | 8.30e-07 | 3 |