FFCP PHASE1:Hg19::chr14:105954292..105954314,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(6 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1396 | |EntrezGene=1396 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2360 | |HGNC=2360 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=101bp_to_ENST00000461556_5end | |association_with_transcript=101bp_to_ENST00000461556_5end | ||
|cluster_id=chr14:105954292..105954314,+ | |||
|coexpression_cluster_id=C92 | |coexpression_cluster_id=C92 | ||
|description=CAGE_peak_7_at_CRIP1_5end | |description=CAGE_peak_7_at_CRIP1_5end | ||
|id=chr14:105954292..105954314,+ | |id=chr14:105954292..105954314,+ | ||
|ontology_enrichment_celltype=CL:0000860!4.09e-42!45;CL:0002057!1.04e-37!42;CL:0002009!2.66e-30!65;CL:0002194!2.22e-28!63;CL:0000576!2.22e-28!63;CL:0000040!2.22e-28!63;CL:0000559!2.22e-28!63;CL:0000738!8.71e-28!140;CL:0000557!1.57e-26!71;CL:0002087!6.21e-26!119;CL:0000766!1.43e-25!76;CL:0000839!3.49e-24!70;CL:0002031!5.19e-23!124;CL:0000037!8.45e-19!172;CL:0000566!8.45e-19!172;CL:0002032!8.26e-18!165;CL:0000837!8.26e-18!165;CL:0000988!1.87e-17!182;CL:0000763!2.14e-17!112;CL:0000049!2.14e-17!112;CL:0002393!2.64e-11!9;CL:0002397!2.64e-11!9;CL:0000453!9.42e-07!5 | |ontology_enrichment_celltype=CL:0000860!4.09e-42!45;CL:0002057!1.04e-37!42;CL:0002009!2.66e-30!65;CL:0002194!2.22e-28!63;CL:0000576!2.22e-28!63;CL:0000040!2.22e-28!63;CL:0000559!2.22e-28!63;CL:0000738!8.71e-28!140;CL:0000557!1.57e-26!71;CL:0002087!6.21e-26!119;CL:0000766!1.43e-25!76;CL:0000839!3.49e-24!70;CL:0002031!5.19e-23!124;CL:0000037!8.45e-19!172;CL:0000566!8.45e-19!172;CL:0002032!8.26e-18!165;CL:0000837!8.26e-18!165;CL:0000988!1.87e-17!182;CL:0000763!2.14e-17!112;CL:0000049!2.14e-17!112;CL:0002393!2.64e-11!9;CL:0002397!2.64e-11!9;CL:0000453!9.42e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000875;9.63e-19;3!CL:0002396;9.63e-19;3!CL:0000576;9.45e-12;48!CL:0002393;2.70e-09;6!CL:0002397;2.70e-09;6!CL:0000767;4.05e-08;3!CL:0000860;6.16e-07;33!CL:0002057;6.16e-07;33!CL:0000766;6.62e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,3.02e-23,9;CL:0002397,3.02e-23,9;CL:0000860,7.01e-20,42;CL:0002057,7.01e-20,42;CL:0000875,9.65e-19,3;CL:0002396,9.65e-19,3;CL:0000473,4.59e-17,48;CL:0000234,4.59e-17,48;CL:0000766,5.15e-14,72;CL:0002194,3.99e-13,59;CL:0000576,3.99e-13,59;CL:0000040,3.99e-13,59;CL:0000559,3.99e-13,59;CL:0002009,1.28e-12,61;CL:0000839,1.76e-11,66;CL:0000557,2.83e-11,67;CL:0000763,2.26e-08,108;CL:0000049,2.26e-08,108;CL:0000767,3.13e-08,3;CL:0000738,4.98e-07,136 | |||
|ontology_enrichment_development_v019=UBERON:0008947;1.41e-17;29!CL:0002057;4.01e-14;42 | |||
|ontology_enrichment_disease=DOID:305!8.54e-07!106 | |ontology_enrichment_disease=DOID:305!8.54e-07!106 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:305,8.47e-09,106;DOID:0050687,8.45e-08,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.81e-26!102;UBERON:0003061!3.81e-26!102;UBERON:0002193!2.86e-23!112;UBERON:0002371!5.76e-22!80;UBERON:0001474!1.78e-19!86;UBERON:0004765!1.80e-15!101;UBERON:0001434!1.80e-15!101;UBERON:0001737!2.09e-14!9;UBERON:0002405!4.78e-14!115;UBERON:0001557!1.04e-07!19;UBERON:0002204!8.45e-07!167 | |ontology_enrichment_uberon=UBERON:0002390!3.81e-26!102;UBERON:0003061!3.81e-26!102;UBERON:0002193!2.86e-23!112;UBERON:0002371!5.76e-22!80;UBERON:0001474!1.78e-19!86;UBERON:0004765!1.80e-15!101;UBERON:0001434!1.80e-15!101;UBERON:0001737!2.09e-14!9;UBERON:0002405!4.78e-14!115;UBERON:0001557!1.04e-07!19;UBERON:0002204!8.45e-07!167 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.43e-49;9!UBERON:0001557;2.43e-49;9!UBERON:0000072;8.64e-12;37!UBERON:0000065;1.85e-09;44 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.07e-49,9;UBERON:0001557,1.49e-22,19;UBERON:0008947,6.38e-13,38;UBERON:0003258,6.38e-13,38;UBERON:0000072,4.17e-10,47;UBERON:0002371,1.18e-09,76;UBERON:0002390,1.50e-09,98;UBERON:0003061,1.50e-09,98;UBERON:0001474,8.96e-09,82;UBERON:0000065,1.44e-08,54;UBERON:0002193,2.14e-08,108;UBERON:0004765,8.81e-08,90;UBERON:0002405,1.87e-07,93;UBERON:0001434,9.12e-07,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.96682138424452,0.383829398097213,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,0,0,0,1.16318591023652,0.755751887377619,0.242584061187816,0.464858073811369,0.822335776043652,0.929119112685311,0.28769239232215,1.0246428261164,1.41889337933151,0.689491361473237,0,0,0.376484679085209,1.09162460023138,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,0.598390972864896,0.852449501065388,0.580418477257168,0,0.622822248995575,0.502497330513487,1.0429658368404,1.95469960234605,0,0.368277635987565,0,2.95757400836718,5.10250319916104,3.56419697364239,0.561643155732475,0.450530678524519,0.32145117339416,13.9656244433212,8.95125047395906,8.95054353446706,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90412440131485,2.02301628093722,2.6511213287183,2.75734931830985,1.08939722046203,3.08451804844426,2.69662616320329,2.35465758150415,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.71623345421307,0,0.614321404198464,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.716084698702437,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0.1137934482855,1.01701460117107,0.945550727071745,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,3.68902247020896,0.359030577639089,4.45454224880233,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,4.35403490800883,4.01991243974021,4.18788830971367,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,1.59847687665704,0.288180834308212,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.398594520940089,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.118193840883968,0,0,0.157115589916002,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0.534434810531121,0.36757959813938,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821005894499457,0,1.96682138424452,0.383829398097213,1.23852898652861,0,0,0,0,0,0,0.553995408531877,0.802177789880567,0,0,0,0,1.16318591023652,0.755751887377619,0.242584061187816,0.464858073811369,0.822335776043652,0.929119112685311,0.28769239232215,1.0246428261164,1.41889337933151,0.689491361473237,0,0,0.376484679085209,1.09162460023138,0.898893937780338,0.918251677112708,0.320929027076094,1.27867425159808,0.329851300186716,0.598390972864896,0.852449501065388,0.580418477257168,0,0.622822248995575,0.502497330513487,1.0429658368404,1.95469960234605,0,0.368277635987565,0,2.95757400836718,5.10250319916104,3.56419697364239,0.561643155732475,0.450530678524519,0.32145117339416,13.9656244433212,8.95125047395906,8.95054353446706,0,1.09227722252426,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393010762749165,0.411202997999018,0,0.32592226663359,0,0,0.111410456885174,0.294605907474837,0.221533894583621,0,0.128091319725675,0,0,0,0.289803085735052,0.14828656316206,0.267540828089713,0,0.339928028092699,0,0,0.506039384039006,0,0.651083453856419,0,0.150575119077773,0,0,0.236777252044017,0,0,0.267440195783507,0.144824403882799,0,0,0,0.361439152384566,0,0.144846518960824,0,0,0,0,0,0,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0,0,0,0,0,0.355009592516614,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90412440131485,2.02301628093722,2.6511213287183,2.75734931830985,1.08939722046203,3.08451804844426,2.69662616320329,2.35465758150415,2.69323009862473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215627574859517,0.128343036279748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343143423810856,0.413536052245775,0.431428401637234,0.426910231213777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.15350367472613,0,0,0,0.0852266274161009,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0.569647187174163,0.476463550915578,0,0,0.540031437238115,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.445773537109913,0,0.71623345421307,0,0.614321404198464,0,0,0,0.16480387422676,0,0,0,0,0,0,0,0,0.716084698702437,0,0,2.3948309234694,0,0,0,0,0.260427761085233,0,0,0.1137934482855,1.01701460117107,0.945550727071745,0,0,0,0,0,0,0,0,0,0.544692317594951,0,0,0,3.68902247020896,0.359030577639089,4.45454224880233,1.27600463892768,0.0915975934018623,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0.565412285735763,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0.391329237864179,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0.138674673013139,0.173559738335131,0.0979923974143777,0,0,0,4.35403490800883,4.01991243974021,4.18788830971367,0.0969890164884194,0,0,0,0,0,0.782205530939212,0,0,1.59847687665704,0.288180834308212,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0.525774708558629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0.77380195455795,0,0,0,0,0,0,0,0,0,0.5085370753095,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0.106787412567695,0,0,0,0,0,0,0,0.2506898940227,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428883182749851,0,0,0,0,0,0.308801447160972,0,0,0,0,0,0.345430341731199,0,0,0.194860308839388,0.398594520940089,0.654261577023377,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261906694481422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0887023701626388,0,0,0.135939465953663,0,0.118193840883968,0,0,0.157115589916002,0.560544326627578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.22910686854405,0,0,0,0.098150233615243,0.243835849964539,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0.0644578879735772,0.0999411559249289,0.357107877211315,0,0,0,0,0,0,0.0679914901909147,0,0,0.371995018166751,0,0,0,0,0,0,0.534434810531121,0.36757959813938,0,0,0,0,0,0.426467963801962,0,0,0.0620747142958579,0.112131862580613,0,0,0,0,0.134704106029175,0.0717222053926763,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p7@CRIP1 | |short_description=p7@CRIP1 | ||
}} | }} |
Latest revision as of 19:34, 18 September 2015
Short description: | p7@CRIP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_7_at_CRIP1_5end |
Coexpression cluster: | C92_CD14CD16_CD14_Eosinophils_Basophils_Neutrophils_Macrophage_Whole |
Association with transcript: | 101bp_to_ENST00000461556_5end |
EntrezGene: | CRIP1 |
HGNC: | 2360 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 3.02e-23 | 9 |
CD14-positive, CD16-positive monocyte | 3.02e-23 | 9 |
classical monocyte | 7.01e-20 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.01e-20 | 42 |
non-classical monocyte | 9.65e-19 | 3 |
CD14-low, CD16-positive monocyte | 9.65e-19 | 3 |
defensive cell | 4.59e-17 | 48 |
phagocyte | 4.59e-17 | 48 |
myeloid leukocyte | 5.15e-14 | 72 |
monopoietic cell | 3.99e-13 | 59 |
monocyte | 3.99e-13 | 59 |
monoblast | 3.99e-13 | 59 |
promonocyte | 3.99e-13 | 59 |
macrophage dendritic cell progenitor | 1.28e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.76e-11 | 66 |
granulocyte monocyte progenitor cell | 2.83e-11 | 67 |
myeloid cell | 2.26e-08 | 108 |
common myeloid progenitor | 2.26e-08 | 108 |
basophil | 3.13e-08 | 3 |
leukocyte | 4.98e-07 | 136 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.07e-49 | 9 |
upper respiratory tract | 1.49e-22 | 19 |
respiratory primordium | 6.38e-13 | 38 |
endoderm of foregut | 6.38e-13 | 38 |
segment of respiratory tract | 4.17e-10 | 47 |
bone marrow | 1.18e-09 | 76 |
hematopoietic system | 1.50e-09 | 98 |
blood island | 1.50e-09 | 98 |
bone element | 8.96e-09 | 82 |
respiratory tract | 1.44e-08 | 54 |
hemolymphoid system | 2.14e-08 | 108 |
skeletal element | 8.81e-08 | 90 |
immune system | 1.87e-07 | 93 |
skeletal system | 9.12e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 8.47e-09 | 106 |
cell type cancer | 8.45e-08 | 143 |