FFCP PHASE1:Hg19::chr17:1619535..1619553,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84981 | |EntrezGene=84981 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=28219 | |HGNC=28219 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=12bp_to_NR_028502,NR_028503,NR_028504,NR_028505_5end | |association_with_transcript=12bp_to_NR_028502,NR_028503,NR_028504,NR_028505_5end | ||
|cluster_id=chr17:1619535..1619553,- | |||
|description=CAGE_peak_2_at_MIR22HG_5end | |description=CAGE_peak_2_at_MIR22HG_5end | ||
|id=chr17:1619535..1619553,- | |id=chr17:1619535..1619553,- | ||
|ontology_enrichment_celltype=CL:0002057!4.07e-16!42;CL:0000860!3.27e-13!45;CL:0002371!8.13e-13!591;CL:0000048!4.86e-11!430;CL:0000723!6.02e-11!436;CL:0000766!2.03e-10!76;CL:0000055!5.97e-10!180;CL:0000144!9.00e-10!625;CL:0000034!2.24e-09!444;CL:0000057!1.64e-08!75;CL:0000839!2.45e-08!70;CL:0000183!5.13e-08!59;CL:0002009!5.21e-08!65;CL:0000557!7.09e-08!71;CL:0000680!1.17e-07!57;CL:0000056!1.17e-07!57;CL:0000355!1.17e-07!57;CL:0002194!1.75e-07!63;CL:0000576!1.75e-07!63;CL:0000040!1.75e-07!63;CL:0000559!1.75e-07!63;CL:0000187!2.34e-07!54 | |ontology_enrichment_celltype=CL:0002057!4.07e-16!42;CL:0000860!3.27e-13!45;CL:0002371!8.13e-13!591;CL:0000048!4.86e-11!430;CL:0000723!6.02e-11!436;CL:0000766!2.03e-10!76;CL:0000055!5.97e-10!180;CL:0000144!9.00e-10!625;CL:0000034!2.24e-09!444;CL:0000057!1.64e-08!75;CL:0000839!2.45e-08!70;CL:0000183!5.13e-08!59;CL:0002009!5.21e-08!65;CL:0000557!7.09e-08!71;CL:0000680!1.17e-07!57;CL:0000056!1.17e-07!57;CL:0000355!1.17e-07!57;CL:0002194!1.75e-07!63;CL:0000576!1.75e-07!63;CL:0000040!1.75e-07!63;CL:0000559!1.75e-07!63;CL:0000187!2.34e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0000860;3.68e-15;33!CL:0002057;3.68e-15;33!CL:0000473;2.01e-11;39!CL:0000234;2.01e-11;39!CL:0000576;1.73e-07;48!CL:0000766;5.19e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.26e-16,42;CL:0002057,2.26e-16,42;CL:0000473,8.19e-15,48;CL:0000234,8.19e-15,48;CL:0000048,2.51e-13,427;CL:0000723,3.36e-13,433;CL:0000766,4.85e-12,72;CL:0000034,1.31e-11,441;CL:0000839,7.22e-10,66;CL:0002009,1.49e-09,61;CL:0000557,1.80e-09,67;CL:0002194,5.73e-09,59;CL:0000576,5.73e-09,59;CL:0000040,5.73e-09,59;CL:0000559,5.73e-09,59;CL:0000057,1.62e-08,76;CL:0000680,7.82e-08,58;CL:0000056,7.82e-08,58;CL:0000355,7.82e-08,58;CL:0002320,1.11e-07,361;CL:0000187,1.62e-07,55;CL:0000134,1.83e-07,354 | |||
|ontology_enrichment_development_v019=CL:0002057;3.79e-12;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!2.39e-15!216;UBERON:0002204!3.47e-15!167;UBERON:0000486!2.61e-09!82;UBERON:0004290!8.31e-09!70;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0000914!2.39e-08!83;UBERON:0002329!2.39e-08!83;UBERON:0003077!2.39e-08!83;UBERON:0003059!2.39e-08!83;UBERON:0007282!2.39e-08!83;UBERON:0009618!2.39e-08!83;UBERON:0007285!2.39e-08!83;UBERON:0002371!3.09e-08!80;UBERON:0002385!3.32e-08!63;UBERON:0001015!3.32e-08!63;UBERON:0000383!3.32e-08!63;UBERON:0001134!4.36e-08!61;UBERON:0002036!4.36e-08!61;UBERON:0003082!4.36e-08!61;UBERON:0000468!7.38e-08!659;UBERON:0000467!9.70e-08!625;UBERON:0000480!1.47e-07!626;UBERON:0004872!6.74e-07!84;UBERON:0004765!9.51e-07!101;UBERON:0001434!9.51e-07!101 | |ontology_enrichment_uberon=UBERON:0003081!2.39e-15!216;UBERON:0002204!3.47e-15!167;UBERON:0000486!2.61e-09!82;UBERON:0004290!8.31e-09!70;UBERON:0000926!1.05e-08!448;UBERON:0004120!1.05e-08!448;UBERON:0006603!1.05e-08!448;UBERON:0000914!2.39e-08!83;UBERON:0002329!2.39e-08!83;UBERON:0003077!2.39e-08!83;UBERON:0003059!2.39e-08!83;UBERON:0007282!2.39e-08!83;UBERON:0009618!2.39e-08!83;UBERON:0007285!2.39e-08!83;UBERON:0002371!3.09e-08!80;UBERON:0002385!3.32e-08!63;UBERON:0001015!3.32e-08!63;UBERON:0000383!3.32e-08!63;UBERON:0001134!4.36e-08!61;UBERON:0002036!4.36e-08!61;UBERON:0003082!4.36e-08!61;UBERON:0000468!7.38e-08!659;UBERON:0000467!9.70e-08!625;UBERON:0000480!1.47e-07!626;UBERON:0004872!6.74e-07!84;UBERON:0004765!9.51e-07!101;UBERON:0001434!9.51e-07!101 | ||
|ontology_enrichment_uberon_v019= | |||
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| ||
|short_description=p2@MIR22HG | |short_description=p2@MIR22HG | ||
}} | }} |
Latest revision as of 19:32, 18 September 2015
Short description: | p2@MIR22HG |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_MIR22HG_5end |
Coexpression cluster: | NA |
Association with transcript: | 12bp_to_NR_028502, NR_028503, NR_028504, NR_028505_5end |
EntrezGene: | MIR22HG |
HGNC: | 28219 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.26e-16 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.26e-16 | 42 |
defensive cell | 8.19e-15 | 48 |
phagocyte | 8.19e-15 | 48 |
multi fate stem cell | 2.51e-13 | 427 |
somatic stem cell | 3.36e-13 | 433 |
myeloid leukocyte | 4.85e-12 | 72 |
stem cell | 1.31e-11 | 441 |
myeloid lineage restricted progenitor cell | 7.22e-10 | 66 |
macrophage dendritic cell progenitor | 1.49e-09 | 61 |
granulocyte monocyte progenitor cell | 1.80e-09 | 67 |
monopoietic cell | 5.73e-09 | 59 |
monocyte | 5.73e-09 | 59 |
monoblast | 5.73e-09 | 59 |
promonocyte | 5.73e-09 | 59 |
fibroblast | 1.62e-08 | 76 |
muscle precursor cell | 7.82e-08 | 58 |
myoblast | 7.82e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.82e-08 | 58 |
connective tissue cell | 1.11e-07 | 361 |
muscle cell | 1.62e-07 | 55 |
mesenchymal cell | 1.83e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
mesoderm | 6.52e-20 | 315 |
mesoderm-derived structure | 6.52e-20 | 315 |
presumptive mesoderm | 6.52e-20 | 315 |
lateral plate mesoderm | 2.76e-18 | 203 |
musculoskeletal system | 2.81e-16 | 167 |
epithelial vesicle | 1.26e-10 | 78 |
bone marrow | 6.24e-10 | 76 |
multilaminar epithelium | 1.71e-09 | 83 |
somite | 6.40e-09 | 71 |
presomitic mesoderm | 6.40e-09 | 71 |
presumptive segmental plate | 6.40e-09 | 71 |
dermomyotome | 6.40e-09 | 71 |
trunk paraxial mesoderm | 6.40e-09 | 71 |
dense mesenchyme tissue | 1.33e-08 | 73 |
paraxial mesoderm | 1.79e-08 | 72 |
presumptive paraxial mesoderm | 1.79e-08 | 72 |
muscle tissue | 2.73e-08 | 64 |
musculature | 2.73e-08 | 64 |
musculature of body | 2.73e-08 | 64 |
skeletal muscle tissue | 3.64e-08 | 62 |
striated muscle tissue | 3.64e-08 | 62 |
myotome | 3.64e-08 | 62 |
bone element | 6.26e-08 | 82 |
skeletal element | 1.12e-07 | 90 |
hematopoietic system | 1.33e-07 | 98 |
blood island | 1.33e-07 | 98 |
skeletal system | 1.71e-07 | 100 |
immune system | 2.25e-07 | 93 |
hemolymphoid system | 2.48e-07 | 108 |
connective tissue | 3.42e-07 | 371 |
splanchnic layer of lateral plate mesoderm | 9.64e-07 | 83 |