FFCP PHASE1:Hg19::chr7:45952542..45952547,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3486 | |EntrezGene=3486 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=5472 | |HGNC=5472 | ||
|TSSclassifier=strong | |||
|UniProt=Q71RC0 | |UniProt=Q71RC0 | ||
|association_with_transcript=79bp_to_AF370418_5end | |association_with_transcript=79bp_to_AF370418_5end | ||
|cluster_id=chr7:45952542..45952547,- | |||
|coexpression_cluster_id=C223 | |coexpression_cluster_id=C223 | ||
|description=CAGE_peak_31_at_IGFBP3_5end | |description=CAGE_peak_31_at_IGFBP3_5end | ||
|id=chr7:45952542..45952547,- | |id=chr7:45952542..45952547,- | ||
|ontology_enrichment_celltype=CL:0002620!8.00e-11!23;CL:0000057!1.08e-09!75;CL:0000055!6.30e-09!180;CL:0000153!9.05e-09!9;CL:0000447!9.05e-09!9;CL:0002334!8.42e-08!12;CL:0000135!2.75e-07!3;CL:0000386!2.75e-07!3;CL:0000388!2.75e-07!3;CL:0002580!3.93e-07!3;CL:0002579!4.64e-07!3 | |ontology_enrichment_celltype=CL:0002620!8.00e-11!23;CL:0000057!1.08e-09!75;CL:0000055!6.30e-09!180;CL:0000153!9.05e-09!9;CL:0000447!9.05e-09!9;CL:0002334!8.42e-08!12;CL:0000135!2.75e-07!3;CL:0000386!2.75e-07!3;CL:0000388!2.75e-07!3;CL:0002580!3.93e-07!3;CL:0002579!4.64e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0000138;1.05e-17;6!CL:0000153;5.32e-12;9!CL:0000447;5.32e-12;9!CL:0002595;7.94e-10;5!CL:0002620;4.91e-08;23!CL:0000327;2.11e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0000058,1.15e-17,6;CL:0000138,1.15e-17,6;CL:0000153,5.63e-12,9;CL:0000447,5.63e-12,9;CL:0002595,8.88e-10,5;CL:0002620,4.82e-08,23;CL:0000327,2.18e-07,15 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!2.54e-07!5;DOID:450!2.54e-07!5;DOID:66!2.54e-07!5;DOID:423!2.54e-07!5;DOID:0080000!2.54e-07!5;DOID:11722!2.54e-07!5 | |ontology_enrichment_disease=DOID:17!2.54e-07!5;DOID:450!2.54e-07!5;DOID:66!2.54e-07!5;DOID:423!2.54e-07!5;DOID:0080000!2.54e-07!5;DOID:11722!2.54e-07!5 | ||
|ontology_enrichment_disease_v019=DOID:4235;2.91e-12;1!DOID:17;7.94e-10;5!DOID:450;7.94e-10;5!DOID:66;7.94e-10;5!DOID:423;7.94e-10;5!DOID:0080000;7.94e-10;5!DOID:11722;7.94e-10;5 | |||
|ontology_enrichment_disease_v019_2=DOID:4235,3.85e-12,1;DOID:17,7.44e-10,5;DOID:450,7.44e-10,5;DOID:66,7.44e-10,5;DOID:423,7.44e-10,5;DOID:0080000,7.44e-10,5;DOID:11722,7.44e-10,5 | |||
|ontology_enrichment_uberon=UBERON:0003124!7.99e-08!7;UBERON:0000043!2.75e-07!3;UBERON:0005631!8.19e-07!14;UBERON:0000158!8.19e-07!14 | |ontology_enrichment_uberon=UBERON:0003124!7.99e-08!7;UBERON:0000043!2.75e-07!3;UBERON:0005631!8.19e-07!14;UBERON:0000158!8.19e-07!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0003834;7.94e-10;5!UBERON:0001533;7.94e-10;5!UBERON:0003513;2.91e-07;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003834,8.88e-10,5;UBERON:0001533,8.88e-10,5;UBERON:0005631,1.14e-07,14;UBERON:0000158,1.14e-07,14;UBERON:0003513,3.14e-07,7;UBERON:0003124,3.79e-07,7 | |||
|phase1_expression=0,0.214100523890983,0.281908808191942,0,0,0.872338524100369,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.97583067623023,2.00535164254356,4.63508860674636,0,0.486634870302636,0,0.221729397462564,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.4351170855109,0,0.423863802319124,2.40072876867522,0.206105058476878,0.257640540045629,0.558350568994769,0.168776332241266,0.292311015483596,2.27190396819703,0.276149695926898,0,3.19508633264953,0.604512589365842,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.41849132023278,0,0,0,0,0.325736184293735,0,0,0,0,0,0,0,0,0,0,0,0.434343920002738,0.61642896765115,0.716243852959582,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.415941723061614,0.713715955188647,0,0.117141414992713,0,0,0,0,0.184369168541703,0,0,0,0,0,0,0,1.66435439510497,0.604780586659361,0.496215615637554,0.306923946576125,0.841980283299221,0.512556597022804,0.511707249066704,0.321707842287215,0,0,0,0,0,0.348631135379878,0,0,0,0,0,0,0.902399225814824,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0.94443704049192,0,0,0,0,0.18532421910392,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,1.58510321173008,0,0,0,0,0,0,0,0,1.32687795048244,2.19225442626881,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0.658589785919804,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,2.76444631889309,0,0,0.111308705022906,0,0,0,0,0,0,0,0.933118762985422,0,0.179021174675609,0,0,0,0,0,0,0,0,0,0,0,0,0.236387681767936,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.957003479195758,0,1.06606955203727,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.0979923974143777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799238438328521,0,0,0,0,0,0,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0.25426853765475,1.08599920350743,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0.251567901752575,0,0,0.151230923763239,0.310874401165561,0.147855149989634,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0.179088841081487,0.617602894321944,0.219284049578707,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6124909547064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0,0.177404740325278,0,0,0,0,0,0,0,0,0,0,1.51149313853035,0.47775168788705,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111855431797792,0,0.121917924982269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18948980281472,0,0,0,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0.371995018166751,1.84870251452567,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 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| ||
|short_description=p31@IGFBP3 | |short_description=p31@IGFBP3 | ||
}} | }} |
Latest revision as of 19:22, 18 September 2015
Short description: | p31@IGFBP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_31_at_IGFBP3_5end |
Coexpression cluster: | C223_Chondrocyte_basal_renal_Fibroblast_Smooth_spindle_Synoviocyte |
Association with transcript: | 79bp_to_AF370418_5end |
EntrezGene: | IGFBP3 |
HGNC: | 5472 |
UniProt: | Q71RC0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
chondroblast | 1.15e-17 | 6 |
chondrocyte | 1.15e-17 | 6 |
GAG secreting cell | 5.63e-12 | 9 |
carbohydrate secreting cell | 5.63e-12 | 9 |
smooth muscle cell of the subclavian artery | 8.88e-10 | 5 |
skin fibroblast | 4.82e-08 | 23 |
extracellular matrix secreting cell | 2.18e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
thoracic segment blood vessel | 8.88e-10 | 5 |
subclavian artery | 8.88e-10 | 5 |
extraembryonic membrane | 1.14e-07 | 14 |
membranous layer | 1.14e-07 | 14 |
trunk blood vessel | 3.14e-07 | 7 |
chorion | 3.79e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
spindle cell sarcoma | 3.85e-12 | 1 |
musculoskeletal system disease | 7.44e-10 | 5 |
myotonic disease | 7.44e-10 | 5 |
muscle tissue disease | 7.44e-10 | 5 |
myopathy | 7.44e-10 | 5 |
muscular disease | 7.44e-10 | 5 |
myotonic dystrophy | 7.44e-10 | 5 |