FFCP PHASE1:Hg19::chr1:174846570..174846584,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt=F5H8L0 | |||
|association_with_transcript=0bp_to_ENST00000392064_5end | |||
|cluster_id=chr1:174846570..174846584,+ | |||
|description=CAGE_peak_21_at_RABGAP1L_5end | |||
|id=chr1:174846570..174846584,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000167;1.51e-08;1!CL:0000164;1.51e-08;1!CL:0000502;1.51e-08;1!CL:0000172;1.51e-08;1!CL:0000173;1.51e-08;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000167,1.52e-08,1;CL:0000164,1.52e-08,1;CL:0000502,1.52e-08,1;CL:0000172,1.52e-08,1;CL:0000173,1.52e-08,1;CL:0002351,1.52e-08,1 | |||
|ontology_enrichment_development_v019=CL:0002351;1.51e-08;1!UBERON:0000358;2.09e-08;1!UBERON:0008801;4.56e-08;1!UBERON:0006242;4.56e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4430;1.51e-08;1!DOID:178;4.56e-08;1!DOID:326;4.56e-08;1!DOID:3978;4.56e-08;1!DOID:3394;4.56e-08;1!DOID:5844;4.56e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4430,1.52e-08,1;DOID:178,4.41e-08,1;DOID:326,4.41e-08,1;DOID:3978,4.41e-08,1;DOID:3394,4.41e-08,1;DOID:5844,4.41e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.41e-22!115;UBERON:0001049!1.76e-17!57;UBERON:0005068!1.76e-17!57;UBERON:0006241!1.76e-17!57;UBERON:0007135!1.76e-17!57;UBERON:0001893!1.07e-16!34;UBERON:0002616!1.33e-16!59;UBERON:0002619!2.27e-16!22;UBERON:0001869!3.87e-16!32;UBERON:0002780!4.94e-16!41;UBERON:0001890!4.94e-16!41;UBERON:0006240!4.94e-16!41;UBERON:0002791!1.57e-15!33;UBERON:0003080!1.69e-15!42;UBERON:0001017!2.10e-15!82;UBERON:0005743!2.59e-15!86;UBERON:0002020!1.19e-14!34;UBERON:0003528!1.19e-14!34;UBERON:0000956!6.23e-14!25;UBERON:0000203!6.23e-14!25;UBERON:0000955!7.16e-14!69;UBERON:0006238!7.16e-14!69;UBERON:0001950!1.07e-13!20;UBERON:0000073!6.19e-13!94;UBERON:0001016!6.19e-13!94;UBERON:0003075!1.63e-12!86;UBERON:0007284!1.63e-12!86;UBERON:0002346!1.47e-11!90;UBERON:0003056!1.03e-09!61;UBERON:0000033!8.24e-09!123;UBERON:0004121!1.28e-08!169;UBERON:0000924!3.64e-08!173;UBERON:0006601!3.64e-08!173;UBERON:0001871!5.46e-08!7;UBERON:0000153!5.58e-08!129;UBERON:0007811!5.58e-08!129;UBERON:0000200!9.06e-08!6;UBERON:0001896!9.36e-07!3;UBERON:0005290!9.36e-07!3;UBERON:0010096!9.36e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002771;1.93e-14;2!UBERON:0001950;3.14e-11;20!UBERON:0000200;7.79e-11;6!UBERON:0001896;1.06e-10;3!UBERON:0005290;1.06e-10;3!UBERON:0002619;3.29e-10;22!UBERON:0001871;2.33e-09;6!UBERON:0000956;5.67e-09;25!UBERON:0000203;5.67e-09;25!UBERON:0002171;2.09e-08;1!UBERON:0006518;2.09e-08;1!UBERON:0008949;2.09e-08;1!UBERON:0000101;2.09e-08;1!UBERON:0002167;2.09e-08;1!UBERON:0001041;4.10e-08;14!UBERON:0002022;4.56e-08;1!UBERON:0001831;4.56e-08;1!UBERON:0001567;4.56e-08;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002771,2.07e-14,2;UBERON:0001950,2.97e-11,20;UBERON:0000200,7.41e-11,6;UBERON:0001896,1.06e-10,3;UBERON:0005290,1.06e-10,3;UBERON:0010096,1.06e-10,3;UBERON:0002619,3.13e-10,22;UBERON:0001871,2.30e-09,6;UBERON:0000956,5.43e-09,25;UBERON:0000203,5.43e-09,25;UBERON:0002171,1.63e-08,1;UBERON:0006518,1.63e-08,1;UBERON:0008949,1.63e-08,1;UBERON:0000101,1.63e-08,1;UBERON:0002167,1.63e-08,1;UBERON:0001831,3.33e-08,1;UBERON:0001567,3.33e-08,1;UBERON:0008801,3.33e-08,1;UBERON:0002022,6.68e-08,1;UBERON:0007023,1.03e-07,114;UBERON:0000073,4.07e-07,53;UBERON:0002616,4.07e-07,53;UBERON:0002791,5.66e-07,32;UBERON:0001869,5.66e-07,32 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,2.21160542851358,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0.445641827540694,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0.113309342697566,0,1.03088233644789,0,0.318565414324097,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.204154171254893,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132529768321485,0,0.414644220061482,0.252320850875628,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120859449591622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137836572484531,0,0,0.426133137080504,0.890320356467374,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.11362469558097,0,0,0,4.22961015263549,0,0,0,0,0,0.95497793895076,7.42411702081597,1.22864280839693,0,0.422008249231538,0,0,0,0,0.276283915531148,0,0,0.123084805461069,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.649376687132959,0,0,0,0,0.227586896570999,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,1.09692698576986,0,0,0,0,0,0.0897576444097721,0,0,0,0,0,0,0.332423363800313,0,0.392125068635479,0,0.189753732724185,0.158936578980379,0,0.163232808159148,0.141353071433941,0,0,0.265372693510018,0,0,0,0,0.808813595768125,0.802577647298789,0,0.182454789215666,0,0,0,2.41981432097328,0,0.31593289814244,0,0.103688191397247,0,0,0,0,0,0,0.867798691675654,0.293977192243133,0,0.17472666824203,0,0,0,0,0.0969890164884194,0,0.225980740780532,0,0,0.759729551470544,0,0,1.49417096317547,0,2.3054466744657,0,2.23073497220554,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,1.39775300349294,0,0,0,0,0,0,0,0,0.393709926058995,0.0846733320657845,0.795229689809303,0.817220436669454,0.160753148465019,0.137539436597234,0.415440338029185,0,0,1.03274246318642,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0.854299300541557,2.04365596629566,2.89967338743037,0,0,0,0,0,0,0,0,0,0,1.09823638411767,2.50381861413,6.88091034828085,6.54481404067428,0.745156835296601,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0.453411851024545,0,0,0,0,0,0,0,0,0,0,0,1.52084279766904,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.770750701157514,0,0.638535436228605,0.82046545696302,0,0.138314504928436,0.484426936895553,0,0,0,0,0,0,0,0,0.376051641746286,0,1.56302802246618,0,0,0.739280431085226,0.540300676947157,0,1.65349437200947,0.570742291745161,0,1.64477330057155,0,0,0,0.535701835878287,0,0,0.91064876540519,0,0,0,0.815636795721981,0.328863867814245,0,0,0,0,0,0,0,0,0.357382720883282,0,0,0,0,0,0,0,1.72090943528111,0,0,0,0,0,0,0,0.196300467230486,10.4849415484752,0,0,0,0.485710993059139,0.233939463462106,0,0,0.33883824611688,0,0.301925687133347,0,0.655678681511872,0.470317296361523,0,3.77082475362602,0,0,0,0,0.187967835959707,0.128915775947154,0,0,0,0,5.11235471772562,0.917458566809082,0,0.157771562193185,0.203974470572744,0,0.5290268405154,0,0,0,0,0.109265571963696,0,0.407955318967927,0.26721740526556,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.342233301085281,0,0.143444410785353,0,0,0,0,1.25755282949222,2.34640942403454,0,0,0,0,0 | |||
|short_description=p21@RABGAP1L | |||
}} |
Latest revision as of 19:20, 18 September 2015
Short description: | p21@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_21_at_RABGAP1L_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000392064_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | F5H8L0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
peptide hormone secreting cell | 1.52e-08 | 1 |
enteroendocrine cell | 1.52e-08 | 1 |
type D enteroendocrine cell | 1.52e-08 | 1 |
somatostatin secreting cell | 1.52e-08 | 1 |
pancreatic D cell | 1.52e-08 | 1 |
progenitor cell of endocrine pancreas | 1.52e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
middle temporal gyrus | 2.07e-14 | 2 |
neocortex | 2.97e-11 | 20 |
gyrus | 7.41e-11 | 6 |
medulla oblongata | 1.06e-10 | 3 |
myelencephalon | 1.06e-10 | 3 |
future myelencephalon | 1.06e-10 | 3 |
regional part of cerebral cortex | 3.13e-10 | 22 |
temporal lobe | 2.30e-09 | 6 |
cerebral cortex | 5.43e-09 | 25 |
pallium | 5.43e-09 | 25 |
lower lobe of right lung | 1.63e-08 | 1 |
right lung lobe | 1.63e-08 | 1 |
lower lobe of lung | 1.63e-08 | 1 |
lobe of lung | 1.63e-08 | 1 |
right lung | 1.63e-08 | 1 |
parotid gland | 3.33e-08 | 1 |
cheek | 3.33e-08 | 1 |
parotid gland primordium | 3.33e-08 | 1 |
insula | 6.68e-08 | 1 |
adult organism | 1.03e-07 | 114 |
regional part of nervous system | 4.07e-07 | 53 |
regional part of brain | 4.07e-07 | 53 |
regional part of telencephalon | 5.66e-07 | 32 |
cerebral hemisphere | 5.66e-07 | 32 |
Ontology term | p-value | n |
---|---|---|
somatostatinoma | 1.52e-08 | 1 |
vascular disease | 4.41e-08 | 1 |
ischemia | 4.41e-08 | 1 |
extrinsic cardiomyopathy | 4.41e-08 | 1 |
myocardial ischemia | 4.41e-08 | 1 |
myocardial infarction | 4.41e-08 | 1 |