FFCP PHASE1:Hg19::chr1:174768814..174768817,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |EntrezGene=9910 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |HGNC=24663 | ||
|TSSclassifier=strong | |||
|UniProt=Q5R372 | |UniProt=Q5R372 | ||
|association_with_transcript=-217bp_to_NM_001243765_5end | |association_with_transcript=-217bp_to_NM_001243765_5end | ||
|cluster_id=chr1:174768814..174768817,+ | |||
|coexpression_cluster_id=C53 | |coexpression_cluster_id=C53 | ||
|description=CAGE_peak_36_at_RABGAP1L_5end | |description=CAGE_peak_36_at_RABGAP1L_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002567;9.45e-18;3!CL:0002569;1.44e-09;6 | |ontology_enrichment_celltype_v019=CL:0002567;9.45e-18;3!CL:0002569;1.44e-09;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0002567,9.46e-18,3;CL:0002569,1.57e-09,6 | |||
|ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3 | |ontology_enrichment_development_v019=UBERON:0006215;9.45e-18;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.67e-28!57;UBERON:0005068!1.67e-28!57;UBERON:0006241!1.67e-28!57;UBERON:0007135!1.67e-28!57;UBERON:0000955!1.77e-27!69;UBERON:0006238!1.77e-27!69;UBERON:0002616!2.81e-27!59;UBERON:0005743!3.46e-27!86;UBERON:0001017!5.46e-27!82;UBERON:0001893!6.99e-26!34;UBERON:0002020!1.22e-25!34;UBERON:0003528!1.22e-25!34;UBERON:0002780!3.37e-25!41;UBERON:0001890!3.37e-25!41;UBERON:0006240!3.37e-25!41;UBERON:0001869!3.94e-25!32;UBERON:0003080!1.84e-24!42;UBERON:0002791!5.04e-24!33;UBERON:0000073!9.96e-24!94;UBERON:0001016!9.96e-24!94;UBERON:0003075!2.91e-19!86;UBERON:0007284!2.91e-19!86;UBERON:0002619!3.92e-18!22;UBERON:0002346!4.84e-18!90;UBERON:0001950!1.85e-17!20;UBERON:0003056!1.05e-16!61;UBERON:0000956!1.25e-15!25;UBERON:0000203!1.25e-15!25;UBERON:0000033!5.93e-14!123;UBERON:0000153!6.22e-14!129;UBERON:0007811!6.22e-14!129;UBERON:0007023!1.71e-13!115;UBERON:0004121!1.16e-12!169;UBERON:0002420!1.29e-12!9;UBERON:0007245!1.29e-12!9;UBERON:0010009!1.29e-12!9;UBERON:0010011!1.29e-12!9;UBERON:0000454!1.29e-12!9;UBERON:0002308!2.88e-12!9;UBERON:0000125!2.88e-12!9;UBERON:0000924!3.83e-12!173;UBERON:0006601!3.83e-12!173;UBERON:0009663!4.49e-12!7;UBERON:0001871!3.91e-11!7;UBERON:0000369!2.20e-10!4;UBERON:0002435!2.20e-10!4;UBERON:0000204!2.20e-10!4;UBERON:0010082!2.20e-10!4;UBERON:0000200!4.18e-10!6;UBERON:0005383!2.45e-08!3;UBERON:0005382!2.45e-08!3;UBERON:0002771!3.74e-08!3;UBERON:0004733!2.97e-07!12;UBERON:0002028!2.97e-07!12;UBERON:0007277!2.97e-07!12;UBERON:0002680!3.49e-07!9;UBERON:0001895!3.49e-07!9;UBERON:0010092!3.49e-07!9 | |ontology_enrichment_uberon=UBERON:0001049!1.67e-28!57;UBERON:0005068!1.67e-28!57;UBERON:0006241!1.67e-28!57;UBERON:0007135!1.67e-28!57;UBERON:0000955!1.77e-27!69;UBERON:0006238!1.77e-27!69;UBERON:0002616!2.81e-27!59;UBERON:0005743!3.46e-27!86;UBERON:0001017!5.46e-27!82;UBERON:0001893!6.99e-26!34;UBERON:0002020!1.22e-25!34;UBERON:0003528!1.22e-25!34;UBERON:0002780!3.37e-25!41;UBERON:0001890!3.37e-25!41;UBERON:0006240!3.37e-25!41;UBERON:0001869!3.94e-25!32;UBERON:0003080!1.84e-24!42;UBERON:0002791!5.04e-24!33;UBERON:0000073!9.96e-24!94;UBERON:0001016!9.96e-24!94;UBERON:0003075!2.91e-19!86;UBERON:0007284!2.91e-19!86;UBERON:0002619!3.92e-18!22;UBERON:0002346!4.84e-18!90;UBERON:0001950!1.85e-17!20;UBERON:0003056!1.05e-16!61;UBERON:0000956!1.25e-15!25;UBERON:0000203!1.25e-15!25;UBERON:0000033!5.93e-14!123;UBERON:0000153!6.22e-14!129;UBERON:0007811!6.22e-14!129;UBERON:0007023!1.71e-13!115;UBERON:0004121!1.16e-12!169;UBERON:0002420!1.29e-12!9;UBERON:0007245!1.29e-12!9;UBERON:0010009!1.29e-12!9;UBERON:0010011!1.29e-12!9;UBERON:0000454!1.29e-12!9;UBERON:0002308!2.88e-12!9;UBERON:0000125!2.88e-12!9;UBERON:0000924!3.83e-12!173;UBERON:0006601!3.83e-12!173;UBERON:0009663!4.49e-12!7;UBERON:0001871!3.91e-11!7;UBERON:0000369!2.20e-10!4;UBERON:0002435!2.20e-10!4;UBERON:0000204!2.20e-10!4;UBERON:0010082!2.20e-10!4;UBERON:0000200!4.18e-10!6;UBERON:0005383!2.45e-08!3;UBERON:0005382!2.45e-08!3;UBERON:0002771!3.74e-08!3;UBERON:0004733!2.97e-07!12;UBERON:0002028!2.97e-07!12;UBERON:0007277!2.97e-07!12;UBERON:0002680!3.49e-07!9;UBERON:0001895!3.49e-07!9;UBERON:0010092!3.49e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.44e-09;6!UBERON:0003422;1.44e-09;6!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | |ontology_enrichment_uberon_v019=UBERON:0002037;1.44e-09;6!UBERON:0003422;1.44e-09;6!UBERON:0003104;2.18e-08;7!UBERON:0009142;2.18e-08;7!UBERON:0002680;8.37e-07;9!UBERON:0001895;8.37e-07;9 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.32e-09,6;UBERON:0006215,1.32e-09,6;UBERON:0003422,1.57e-09,6;UBERON:0002680,7.91e-07,9;UBERON:0001895,7.91e-07,9;UBERON:0010092,7.91e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0.867798691675654,0,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,5.67229403238546,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.443910671357348,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0.171488009437418,0.475788130837822,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0.320568492303233 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,0,0,0.142169232487422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.521482918420201,0.217188844705117,0,0,0,0,0,0.209658645508376,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0,0,0,0,0.113309342697566,0,0.34362744548263,0.253019692019503,0,0,0,0,0.127986611154418,0,0,0,0,0,0.289648807765598,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.643240938192885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.621984346622316,0,0.50496973370552,0,0,1.17217447210047,0,0,0,0.285826432630578,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.871533458600294,0,0,0,0,0,1.14861935834114,0,0,0,0,0,0.197030760201927,0,0.128343036279748,0.254094624222463,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.431428401637234,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296964680832639,0.307160702099232,0,0.422008249231538,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278304294485554,0,0,0,0,0,0,0,0,0,0,0.885741385813839,0.241192877250816,1.52581736317083,0.774054819518572,0.295547618953547,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0.91821828489147,0,0,0,0,0,0,0,0,0,0.867798691675654,0,0,0,0.171986032471617,0,0,0,0,0,0.677942222341597,0,0,0.443175571691151,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.244052529803926,0.1251909307065,0,0,0.18628920882415,5.67229403238546,0,0.151649117541648,0,0,0,0,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0.491545817507439,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192687675289379,0,0,0,0.252071696221718,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.337687923091973,0,0.413373593002368,0.443910671357348,0,0,0,0,0,0,0,0,0.227662191351298,0,0.115233987555779,0.171488009437418,0.475788130837822,0.0657727735628491,0,0,0,0.157115589916002,0,0,0,0,0.571812353413251,0,0,0,0,0,0,0,0,0,0,0,0,0,0.955538938977433,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0.150962843566674,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0.705789743431384,0,0,0,0.143339583151451,0,0.203974470572744,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0,0,0,0,0,0.665320713092027,0,0,0,0,0,0,0,0,0,0.320568492303233 | ||
|short_description=p36@RABGAP1L | |short_description=p36@RABGAP1L | ||
}} | }} |
Latest revision as of 19:06, 18 September 2015
Short description: | p36@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_36_at_RABGAP1L_5end |
Coexpression cluster: | C53_medulloblastoma_pineal_retinoblastoma_small_retina_eye_pituitary |
Association with transcript: | -217bp_to_NM_001243765_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | Q5R372 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 9.46e-18 | 3 |
mesenchymal stem cell of umbilical cord | 1.57e-09 | 6 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.32e-09 | 6 |
rhombic lip | 1.32e-09 | 6 |
mesenchyme of umbilical cord | 1.57e-09 | 6 |
regional part of metencephalon | 7.91e-07 | 9 |
metencephalon | 7.91e-07 | 9 |
future metencephalon | 7.91e-07 | 9 |