FFCP PHASE1:Hg19::chr12:51158359..51158395,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=466 | |EntrezGene=466 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=783 | |HGNC=783 | ||
|TSSclassifier=strong | |||
|UniProt=F8VYN3 | |UniProt=F8VYN3 | ||
|association_with_transcript=67bp_to_ENST00000552487_5end | |association_with_transcript=67bp_to_ENST00000552487_5end | ||
|cluster_id=chr12:51158359..51158395,+ | |||
|coexpression_cluster_id=C8 | |coexpression_cluster_id=C8 | ||
|description=CAGE_peak_4_at_ATF1_5end | |description=CAGE_peak_4_at_ATF1_5end | ||
|id=chr12:51158359..51158395,+ | |id=chr12:51158359..51158395,+ | ||
|ontology_enrichment_celltype=CL:0000738!7.99e-14!140;CL:0000037!1.09e-12!172;CL:0000566!1.09e-12!172;CL:0000988!2.55e-11!182;CL:0000542!1.21e-10!53;CL:0000051!1.21e-10!53;CL:0002032!1.57e-10!165;CL:0000837!1.57e-10!165;CL:0000838!3.47e-10!52;CL:0002087!7.14e-08!119;CL:0000094!1.12e-07!8;CL:0000791!1.53e-07!18;CL:0000789!1.53e-07!18;CL:0002420!1.53e-07!18;CL:0002419!1.53e-07!18;CL:0000790!1.53e-07!18;CL:0002031!1.62e-07!124;CL:0000084!3.21e-07!25;CL:0000827!3.21e-07!25 | |ontology_enrichment_celltype=CL:0000738!7.99e-14!140;CL:0000037!1.09e-12!172;CL:0000566!1.09e-12!172;CL:0000988!2.55e-11!182;CL:0000542!1.21e-10!53;CL:0000051!1.21e-10!53;CL:0002032!1.57e-10!165;CL:0000837!1.57e-10!165;CL:0000838!3.47e-10!52;CL:0002087!7.14e-08!119;CL:0000094!1.12e-07!8;CL:0000791!1.53e-07!18;CL:0000789!1.53e-07!18;CL:0002420!1.53e-07!18;CL:0002419!1.53e-07!18;CL:0000790!1.53e-07!18;CL:0002031!1.62e-07!124;CL:0000084!3.21e-07!25;CL:0000827!3.21e-07!25 | ||
|ontology_enrichment_celltype_v019=CL:0000624;1.25e-19;6!CL:0000791;1.49e-16;18!CL:0000789;1.49e-16;18!CL:0002419;1.49e-16;18!CL:0000084;4.35e-16;25!CL:0000094;4.75e-14;8!CL:0000081;1.65e-13;11!CL:0000623;4.60e-11;3!CL:0000542;9.28e-11;53!CL:0000898;2.63e-10;3!CL:0000226;4.89e-10;3!CL:0000842;4.89e-10;3!CL:0000784;1.10e-09;3!CL:0000771;1.27e-07;2!CL:0000815;2.95e-07;2!CL:0000792;2.95e-07;2!CL:0002677;2.95e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000624,1.08e-19,6;CL:0000738,2.36e-19,136;CL:0000037,3.23e-17,168;CL:0000988,5.16e-17,177;CL:0000791,1.59e-16,18;CL:0000789,1.59e-16,18;CL:0002420,1.59e-16,18;CL:0002419,1.59e-16,18;CL:0000790,1.59e-16,18;CL:0000084,5.67e-16,25;CL:0000827,5.67e-16,25;CL:0000838,1.90e-15,52;CL:0000542,4.56e-15,53;CL:0000051,4.56e-15,53;CL:0000094,2.61e-14,8;CL:0000081,1.11e-13,11;CL:0002032,1.30e-12,161;CL:0000837,1.30e-12,161;CL:0000623,4.64e-11,3;CL:0000825,4.64e-11,3;CL:0002087,1.53e-10,115;CL:0000898,2.30e-10,3;CL:0000226,3.05e-10,3;CL:0000842,3.05e-10,3;CL:0000784,7.23e-10,3;CL:0002031,7.53e-09,120;CL:0000771,1.06e-07,2;CL:0000815,2.58e-07,2;CL:0000792,2.58e-07,2;CL:0002677,2.58e-07,2;CL:0000893,3.74e-07,2;CL:0002489,3.74e-07,2;CL:0000809,3.74e-07,2;CL:0000808,3.74e-07,2;CL:0000894,3.74e-07,2;CL:0000806,3.74e-07,2;CL:0000807,3.74e-07,2;CL:0000805,3.74e-07,2;CL:0002425,3.74e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000790;1.49e-16;18!CL:0000051;9.28e-11;53!CL:0002425;2.95e-07;2 | |||
|ontology_enrichment_disease=DOID:162!9.32e-07!235 | |ontology_enrichment_disease=DOID:162!9.32e-07!235 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001737!1.41e-07!9;UBERON:0001557!3.19e-07!19 | |ontology_enrichment_uberon=UBERON:0001737!1.41e-07!9;UBERON:0001557!3.19e-07!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;2.50e-11;9!UBERON:0001557;2.50e-11;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.74e-11,9;UBERON:0001557,3.11e-11,19;UBERON:0002370,1.95e-07,4;UBERON:0005058,1.95e-07,4;UBERON:0009113,1.95e-07,4;UBERON:0003295,1.95e-07,4;UBERON:0005562,1.95e-07,4 | |||
|phase1_expression=0.181678379270557,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0.331397375727916,0,0,0,0,0,0,0,0,0,0,0.152826811495903,0,0.157421562627358,1.96682138424452,3.0706351847777,0.928896739896456,0,0,0,1.16200800870452,0,0,1.10799081706375,2.20598892217156,2.17010870715852,0,0,0,0,0.755751887377619,0,0.232429036905685,0,0.309706370895104,0,0,0.236482229888585,0.344745680736619,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.434377689410233,0,0,0.632924774881769,0,0.425208599930087,0.628975936525128,0.112328631146495,0.300353785683013,0,0,0.39783335439818,0.182664153764634,0,0,0,0.853460445133014,0,0,0.661044872784862,0,1.70763890732835,0.587237189370939,2.29363936875137,0,1.68152568894461,0,5.50787356318733,10.6112905942274,15.8313154229622,1.17030546773475,3.91106719960308,0.473447805734733,0,1.22551502573691,1.47302953737419,1.77227115666897,1.89562704635511,0.896639238079726,0.780356085359269,0.493313713811028,1.38175008892924,0.579606171470105,1.77943875794473,0.535081656179426,1.04535523804977,0.679856056185397,3.83220493601921,2.40539211837841,2.02415753615602,0.95569624297229,0,0,0.451725357233318,0.255973222308837,0,0,0.821127996921047,14.5156855121807,22.7324166415981,12.1652499261551,0,0,0,0,0,0,0,0,0,0,0,0.327447688744282,0.364295288292542,0,0.649094787309367,0.348259474598534,0,1.43094374583205,1.71598473234038,2.60020250930695,0,0,0,0,0,0,0,0.258416759169329,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0,0,0,0.709336764396714,0,0,0,0,0,0,0,0,0.234321431833797,0,0,0,0,0,0,0,0,0,0,0,0,0.718618141816238,0.168336113954066,0.125118519871964,0.277064115484183,0,0,0,0,0,0,0,0,0.103052529238439,0,0.18611685633159,0,0.0974370051611986,0,0,0,0,0.201504196455281,0.169560592310488,0,0.272746120590835,0.573609190778008,0,0,0,0.10366105501537,0,0,0,0,1.38134921352481,0.464367928031979,0,0.709840800239063,2.02301628093722,1.92808823906786,0.55146986366197,1.52515610864684,1.18635309555548,0.943819157121151,1.56977172100277,1.92373578473195,0,0,0,0,0,0,0,0.441463099414651,0.368965315629341,0.514703430895577,0,1.1240175325762,0.100528972411631,0.277765335475589,0,0,0,0,0.234817388471643,0,0,0,0,0,0,0.234004265139238,0,0,0.503946384596579,0,0,0,0,0.492663237895943,0,1.4512968087854,0.432359860250884,0.75745460055828,0,0,0,0,0,0,0,0,0.43596006883328,0,0.129271715757778,0,0,0,0,0,0,0,0.714889968290738,0,0,0,0.355391948742546,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.205476322550383,0,1.2329365839288,11.2307533315099,12.7220269167115,10.3957859386596,0,0,0,0,0,2.24702107184155,2.99161459204025,0.828831026872071,0,0,0.271265023699736,0,0,0.315404830067869,0.117141414992713,0,0,0,0,0.184369168541703,0.173767228936166,0,0,2.68798433959754,2.15714200818617,1.921096040462,0,0,0,0,0.306923946576125,0.280660094433074,0,0,0,0,0,0,0.164254312027618,0,0,0.362578348774867,0.40101294060657,0.0920809889358963,0.229628896329213,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.309123034943167,0.0915694648183434,0,0,0,0,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0.495854746082934,0.576570202095319,0.893288987462089,0.10115778085555,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0.48763373908959,0,1.05650146756755,0.136499911407986,0.424216295861138,0,0,0,0,0,0,0.202910376962704,0,0,0,0,0.7133421029625,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0.459446800413919,0.507447609232169,0.764637207142375,0,0,0,0,0,0,0.106824071127473,0,0,0.743212700502875,0.144269212976445,0.355709216742071,0.159426272728822,0,0.191505370132367,0.211673582723883,0.324621940274555,0.280797178113459,0.684704037099577,0,0,1.18504244461122,0,0.403599414382095,1.70338495076131,0,0,0,0,0,0,0,0,0.66614393599564,0,0,0,0.121360521749513,1.33732061132974,0.284136146806413,0.95497793895076,0.593929361665277,0,0,0.140669416410513,0.779160935160341,0,0.211125408127993,0,0,0,0.306806047506464,0.123084805461069,0,0.179736702294654,0,0,0,2.3948309234694,0,0,0,0,0.520855522170466,0,0,0,0,0.472775363535873,0,0,0.173624994933292,0,0.241192877250816,0,0.110579259931225,0,0,0.544692317594951,0.83654246567162,0,0.227884111694002,0,0.718061155278177,0.869178975376065,0.638002319463839,0.641183153813036,0.533034776018635,0,0,0,0,0,0.335643173951685,0.189753732724185,0.158936578980379,0,0.326465616318295,0,0.216388639742091,0,0,0,2.07564790076435,0.123563938946503,0,0,0,0,0.364909578431332,0.391329237864179,0.485560759068186,0,0,0,0.126373159256976,0.901940516486955,0,0,0.330991955875499,0,0,0,0,0,0.587954384486266,0.261177619741208,0,0,2.32215195093804,1.97341156132701,1.97077096927702,0,0,0,0.137041924646751,0.19871461170299,0.126621591911757,1.36885967914362,0,0,0.799238438328521,0,0,0.343189995723929,0,0.372757606696298,0.942776138467182,0,0.104602846312333,0.407992870545287,0,0,0.136905378891993,1.27746588066972,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0.0787831823072236,0.329663433524666,0.0674035438541849,0,0.846733320657845,0.795229689809303,0,0.321506296930038,0,0,0.2249738915515,3.09520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|short_description=p4@ATF1 | |short_description=p4@ATF1 | ||
}} | }} |
Latest revision as of 19:06, 18 September 2015
Short description: | p4@ATF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ATF1_5end |
Coexpression cluster: | C8_Natural_CD8_Basophils_CD4_CD14_Peripheral_CD34 |
Association with transcript: | 67bp_to_ENST00000552487_5end |
EntrezGene: | ATF1 |
HGNC: | 783 |
UniProt: | F8VYN3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
larynx | 1.74e-11 | 9 |
upper respiratory tract | 3.11e-11 | 19 |
thymus | 1.95e-07 | 4 |
hemolymphoid system gland | 1.95e-07 | 4 |
thymic region | 1.95e-07 | 4 |
pharyngeal gland | 1.95e-07 | 4 |
thymus primordium | 1.95e-07 | 4 |