FFCP PHASE1:Hg19::chr2:86668464..86668529,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=55818 | |EntrezGene=55818 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20815 | |HGNC=20815 | ||
|TSSclassifier=strong | |||
|UniProt=F8WE62 | |UniProt=F8WE62 | ||
|association_with_transcript=0bp_to_ENST00000441719_5end | |association_with_transcript=0bp_to_ENST00000441719_5end | ||
|cluster_id=chr2:86668464..86668529,+ | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_KDM3A_5end | |description=CAGE_peak_1_at_KDM3A_5end | ||
|id=chr2:86668464..86668529,+ | |id=chr2:86668464..86668529,+ | ||
|ontology_enrichment_celltype=CL:0000037!1.45e-28!172;CL:0000566!1.45e-28!172;CL:0000738!2.07e-26!140;CL:0002032!1.91e-25!165;CL:0000837!1.91e-25!165;CL:0000988!1.46e-24!182;CL:0002031!1.38e-19!124;CL:0002087!3.80e-17!119;CL:0000838!7.85e-14!52;CL:0000542!1.95e-13!53;CL:0000051!1.95e-13!53;CL:0000763!1.72e-12!112;CL:0000049!1.72e-12!112;CL:0000791!1.93e-10!18;CL:0000789!1.93e-10!18;CL:0002420!1.93e-10!18;CL:0002419!1.93e-10!18;CL:0000790!1.93e-10!18;CL:0000084!1.54e-09!25;CL:0000827!1.54e-09!25;CL:0000766!1.74e-09!76;CL:0000625!8.86e-08!11;CL:0000557!4.02e-07!71;CL:0000839!6.69e-07!70;CL:0000094!9.22e-07!8 | |ontology_enrichment_celltype=CL:0000037!1.45e-28!172;CL:0000566!1.45e-28!172;CL:0000738!2.07e-26!140;CL:0002032!1.91e-25!165;CL:0000837!1.91e-25!165;CL:0000988!1.46e-24!182;CL:0002031!1.38e-19!124;CL:0002087!3.80e-17!119;CL:0000838!7.85e-14!52;CL:0000542!1.95e-13!53;CL:0000051!1.95e-13!53;CL:0000763!1.72e-12!112;CL:0000049!1.72e-12!112;CL:0000791!1.93e-10!18;CL:0000789!1.93e-10!18;CL:0002420!1.93e-10!18;CL:0002419!1.93e-10!18;CL:0000790!1.93e-10!18;CL:0000084!1.54e-09!25;CL:0000827!1.54e-09!25;CL:0000766!1.74e-09!76;CL:0000625!8.86e-08!11;CL:0000557!4.02e-07!71;CL:0000839!6.69e-07!70;CL:0000094!9.22e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000791;1.80e-10;18!CL:0000789;1.80e-10;18!CL:0002419;1.80e-10;18!CL:0000084;1.33e-09;25!CL:0000542;3.26e-08;53!CL:0000625;8.86e-08;11!CL:0000094;9.14e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,1.61e-30,168;CL:0000738,1.55e-28,136;CL:0002032,2.63e-27,161;CL:0000837,2.63e-27,161;CL:0000988,4.97e-27,177;CL:0002031,1.81e-21,120;CL:0002087,6.48e-19,115;CL:0000763,5.65e-14,108;CL:0000049,5.65e-14,108;CL:0000838,7.85e-14,52;CL:0000542,1.95e-13,53;CL:0000051,1.95e-13,53;CL:0000766,4.60e-11,72;CL:0000791,1.93e-10,18;CL:0000789,1.93e-10,18;CL:0002420,1.93e-10,18;CL:0002419,1.93e-10,18;CL:0000790,1.93e-10,18;CL:0000084,1.54e-09,25;CL:0000827,1.54e-09,25;CL:0000557,1.83e-08,67;CL:0000839,3.18e-08,66;CL:0000625,8.86e-08,11;CL:0000094,9.22e-07,8 | |||
|ontology_enrichment_development_v019=CL:0000790;1.80e-10;18!CL:0000051;3.26e-08;53 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.83e-13!115;UBERON:0002390!1.67e-10!102;UBERON:0003061!1.67e-10!102;UBERON:0002193!4.33e-09!112 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.21e-12,114;UBERON:0002390,6.72e-12,98;UBERON:0003061,6.72e-12,98;UBERON:0002193,2.79e-10,108 | |||
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| ||
|short_description=p1@KDM3A | |short_description=p1@KDM3A | ||
}} | }} |
Latest revision as of 18:59, 18 September 2015
Short description: | p1@KDM3A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KDM3A_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000441719_5end |
EntrezGene: | KDM3A |
HGNC: | 20815 |
UniProt: | F8WE62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 1.61e-30 | 168 |
leukocyte | 1.55e-28 | 136 |
hematopoietic oligopotent progenitor cell | 2.63e-27 | 161 |
hematopoietic multipotent progenitor cell | 2.63e-27 | 161 |
hematopoietic cell | 4.97e-27 | 177 |
hematopoietic lineage restricted progenitor cell | 1.81e-21 | 120 |
nongranular leukocyte | 6.48e-19 | 115 |
myeloid cell | 5.65e-14 | 108 |
common myeloid progenitor | 5.65e-14 | 108 |
lymphoid lineage restricted progenitor cell | 7.85e-14 | 52 |
lymphocyte | 1.95e-13 | 53 |
common lymphoid progenitor | 1.95e-13 | 53 |
myeloid leukocyte | 4.60e-11 | 72 |
mature alpha-beta T cell | 1.93e-10 | 18 |
alpha-beta T cell | 1.93e-10 | 18 |
immature T cell | 1.93e-10 | 18 |
mature T cell | 1.93e-10 | 18 |
immature alpha-beta T cell | 1.93e-10 | 18 |
T cell | 1.54e-09 | 25 |
pro-T cell | 1.54e-09 | 25 |
granulocyte monocyte progenitor cell | 1.83e-08 | 67 |
myeloid lineage restricted progenitor cell | 3.18e-08 | 66 |
CD8-positive, alpha-beta T cell | 8.86e-08 | 11 |
granulocyte | 9.22e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.21e-12 | 114 |
hematopoietic system | 6.72e-12 | 98 |
blood island | 6.72e-12 | 98 |
hemolymphoid system | 2.79e-10 | 108 |