FFCP PHASE1:Hg19::chr21:45773515..45773524,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt=O94759,Q5KTC1,Q14DR2 | |UniProt=O94759,Q5KTC1,Q14DR2 | ||
|association_with_transcript=31bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | |association_with_transcript=31bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | ||
|cluster_id=chr21:45773515..45773524,+ | |||
|coexpression_cluster_id=C4081 | |||
|description=CAGE_peak_5_at_TRPM2_5end | |description=CAGE_peak_5_at_TRPM2_5end | ||
|id=chr21:45773515..45773524,+ | |id=chr21:45773515..45773524,+ | ||
|ontology_enrichment_celltype=CL:0000763!2.08e-42!112;CL:0000049!2.08e-42!112;CL:0000037!1.26e-41!172;CL:0000566!1.26e-41!172;CL:0002009!2.77e-38!65;CL:0000557!3.10e-38!71;CL:0000988!1.23e-37!182;CL:0002032!7.96e-37!165;CL:0000837!7.96e-37!165;CL:0002194!2.42e-36!63;CL:0000576!2.42e-36!63;CL:0000040!2.42e-36!63;CL:0000559!2.42e-36!63;CL:0000766!5.16e-34!76;CL:0000839!1.38e-33!70;CL:0000738!3.69e-32!140;CL:0002087!3.91e-28!119;CL:0002031!3.31e-27!124;CL:0002057!2.56e-26!42;CL:0000860!9.34e-24!45;CL:0002393!7.58e-09!9;CL:0002397!7.58e-09!9;CL:0000451!4.43e-08!10;CL:0000840!2.53e-07!5;CL:0001029!2.53e-07!5;CL:0000134!3.39e-07!358 | |ontology_enrichment_celltype=CL:0000763!2.08e-42!112;CL:0000049!2.08e-42!112;CL:0000037!1.26e-41!172;CL:0000566!1.26e-41!172;CL:0002009!2.77e-38!65;CL:0000557!3.10e-38!71;CL:0000988!1.23e-37!182;CL:0002032!7.96e-37!165;CL:0000837!7.96e-37!165;CL:0002194!2.42e-36!63;CL:0000576!2.42e-36!63;CL:0000040!2.42e-36!63;CL:0000559!2.42e-36!63;CL:0000766!5.16e-34!76;CL:0000839!1.38e-33!70;CL:0000738!3.69e-32!140;CL:0002087!3.91e-28!119;CL:0002031!3.31e-27!124;CL:0002057!2.56e-26!42;CL:0000860!9.34e-24!45;CL:0002393!7.58e-09!9;CL:0002397!7.58e-09!9;CL:0000451!4.43e-08!10;CL:0000840!2.53e-07!5;CL:0001029!2.53e-07!5;CL:0000134!3.39e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000473;1.18e-23;39!CL:0000234;1.18e-23;39!CL:0000235;5.02e-19;6!CL:0000860;3.50e-16;33!CL:0002057;3.50e-16;33!CL:0002619;6.55e-15;3!CL:0000576;7.56e-15;48!CL:0000784;2.04e-14;3!CL:0000763;5.57e-14;100!CL:0000766;6.75e-13;69!CL:0000988;9.88e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.29e-42,108;CL:0000049,1.29e-42,108;CL:0000037,4.15e-34,168;CL:0002194,1.52e-33,59;CL:0000576,1.52e-33,59;CL:0000040,1.52e-33,59;CL:0000559,1.52e-33,59;CL:0002009,2.77e-32,61;CL:0000988,5.80e-32,177;CL:0000557,6.27e-32,67;CL:0002032,1.01e-31,161;CL:0000837,1.01e-31,161;CL:0000839,1.84e-29,66;CL:0000766,1.39e-26,72;CL:0000473,2.47e-25,48;CL:0000234,2.47e-25,48;CL:0002087,1.52e-19,115;CL:0000235,4.88e-19,6;CL:0000738,9.22e-19,136;CL:0002031,1.74e-18,120;CL:0002619,7.38e-15,3;CL:0000860,1.52e-14,42;CL:0002057,1.52e-14,42;CL:0000784,1.92e-14,3;CL:0000134,8.04e-12,354;CL:0002320,1.99e-11,361;CL:0000219,4.82e-10,386;CL:0000048,2.37e-08,427;CL:0000723,4.05e-08,433;CL:0000034,8.11e-08,441 | |||
|ontology_enrichment_development_v019=CL:0000049;4.40e-14;108!CL:0002057;3.63e-10;42 | |||
|ontology_enrichment_disease=DOID:1240!5.16e-11!39;DOID:8692!9.46e-09!31;DOID:2531!1.57e-08!51;DOID:0060083!1.57e-08!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.16e-17;31!DOID:1240;1.67e-17;39!DOID:2531;2.04e-10;51!DOID:0060083;2.04e-10;51 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.21e-22,39;DOID:8692,2.41e-18,31;DOID:2531,3.49e-16,51;DOID:0060083,3.49e-16,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.60e-37!102;UBERON:0003061!6.60e-37!102;UBERON:0002371!2.00e-33!80;UBERON:0002193!8.47e-33!112;UBERON:0001474!8.90e-30!86;UBERON:0002405!2.66e-24!115;UBERON:0004765!1.13e-23!101;UBERON:0001434!1.13e-23!101;UBERON:0007023!7.20e-19!115;UBERON:0001049!8.84e-10!57;UBERON:0005068!8.84e-10!57;UBERON:0006241!8.84e-10!57;UBERON:0007135!8.84e-10!57;UBERON:0003081!7.47e-09!216;UBERON:0002204!2.25e-08!167;UBERON:0001893!3.40e-08!34;UBERON:0002020!4.29e-08!34;UBERON:0003528!4.29e-08!34;UBERON:0002791!1.16e-07!33;UBERON:0002780!1.20e-07!41;UBERON:0001890!1.20e-07!41;UBERON:0006240!1.20e-07!41;UBERON:0002616!1.81e-07!59;UBERON:0003080!2.45e-07!42;UBERON:0001869!8.37e-07!32 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.60e-27,76;UBERON:0001474,4.08e-25,82;UBERON:0002405,1.72e-23,93;UBERON:0004765,2.10e-22,90;UBERON:0002390,5.27e-22,98;UBERON:0003061,5.27e-22,98;UBERON:0001434,1.28e-19,100;UBERON:0002193,1.92e-19,108;UBERON:0002384,6.83e-11,371;UBERON:0002204,1.38e-09,167;UBERON:0003081,9.63e-08,203 | |||
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|short_description=p5@TRPM2 | |short_description=p5@TRPM2 | ||
}} | }} |
Latest revision as of 18:52, 18 September 2015
Short description: | p5@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_TRPM2_5end |
Coexpression cluster: | C4081_granulocyte_Monocytederived_acute_Macrophage_CD14_Dendritic_biphenotypic |
Association with transcript: | 31bp_to_NM_003307, NR_038257, uc002zew.1, uc010gpt.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | O94759Q5KTC1Q14DR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.60e-27 | 76 |
bone element | 4.08e-25 | 82 |
immune system | 1.72e-23 | 93 |
skeletal element | 2.10e-22 | 90 |
hematopoietic system | 5.27e-22 | 98 |
blood island | 5.27e-22 | 98 |
skeletal system | 1.28e-19 | 100 |
hemolymphoid system | 1.92e-19 | 108 |
connective tissue | 6.83e-11 | 371 |
musculoskeletal system | 1.38e-09 | 167 |
lateral plate mesoderm | 9.63e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.21e-22 | 39 |
myeloid leukemia | 2.41e-18 | 31 |
hematologic cancer | 3.49e-16 | 51 |
immune system cancer | 3.49e-16 | 51 |