FFCP PHASE1:Hg19::chr21:45773492..45773512,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr21:45773492..45773512,+ to FFCP PHASE1:Hg19::chr21:45773492..45773512,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7226 | |EntrezGene=7226 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12339 | |HGNC=12339 | ||
|TSSclassifier=strong | |||
|UniProt=O94759,Q5KTC1,Q14DR2 | |UniProt=O94759,Q5KTC1,Q14DR2 | ||
|association_with_transcript=8bp_to_NM_003307,NR_038257,uc002zew.1,uc010gpt.1_5end | |||
|cluster_id=chr21:45773492..45773512,+ | |||
|coexpression_cluster_id=C4081 | |||
|description=CAGE_peak_1_at_TRPM2_5end | |||
|id=chr21:45773492..45773512,+ | |||
|ontology_enrichment_celltype=CL:0000037!8.95e-54!172;CL:0000566!8.95e-54!172;CL:0002032!4.23e-49!165;CL:0000837!4.23e-49!165;CL:0000988!8.65e-48!182;CL:0000738!1.04e-46!140;CL:0000763!1.63e-45!112;CL:0000049!1.63e-45!112;CL:0000766!5.31e-43!76;CL:0002087!5.39e-40!119;CL:0000557!8.95e-40!71;CL:0002009!1.61e-39!65;CL:0002031!3.56e-39!124;CL:0002194!2.63e-38!63;CL:0000576!2.63e-38!63;CL:0000040!2.63e-38!63;CL:0000559!2.63e-38!63;CL:0000839!1.47e-37!70;CL:0002057!6.67e-32!42;CL:0000860!2.16e-28!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;4.30e-29;39!CL:0000234;4.30e-29;39!CL:0000860;2.42e-28;33!CL:0002057;2.42e-28;33!CL:0000576;2.49e-27;48!CL:0000766;1.42e-21;69!CL:0000763;8.84e-17;100!CL:0002087;6.53e-11;104!CL:0000738;6.73e-11;136!CL:0000988;3.66e-09;177!CL:0000235;8.02e-08;6!CL:0000094;2.78e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,1.11e-54,108;CL:0000049,1.11e-54,108;CL:0000766,1.18e-53,72;CL:0000037,1.25e-52,168;CL:0002009,7.18e-52,61;CL:0002194,1.89e-50,59;CL:0000576,1.89e-50,59;CL:0000040,1.89e-50,59;CL:0000559,1.89e-50,59;CL:0000557,7.78e-50,67;CL:0000988,9.61e-48,177;CL:0002032,1.85e-47,161;CL:0000837,1.85e-47,161;CL:0000738,1.57e-45,136;CL:0000839,4.58e-45,66;CL:0000473,8.73e-44,48;CL:0000234,8.73e-44,48;CL:0002087,6.76e-39,115;CL:0000860,2.73e-37,42;CL:0002057,2.73e-37,42;CL:0002031,2.05e-35,120;CL:0000235,7.96e-08,6;CL:0002393,1.43e-07,9;CL:0002397,1.43e-07,9;CL:0000094,2.47e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;6.19e-27;42!CL:0000049;6.32e-16;108 | |||
|ontology_enrichment_disease=DOID:1240!4.05e-09!39;DOID:2531!3.37e-07!51;DOID:0060083!3.37e-07!51;DOID:8692!9.81e-07!31 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.75e-08;39!DOID:8692;1.29e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.65e-10,39;DOID:8692,6.57e-08,31;DOID:2531,4.61e-07,51;DOID:0060083,4.61e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!2.22e-44!115;UBERON:0002390!1.65e-41!102;UBERON:0003061!1.65e-41!102;UBERON:0002193!6.68e-37!112;UBERON:0002371!3.75e-34!80;UBERON:0001474!1.06e-29!86;UBERON:0002405!1.89e-25!115;UBERON:0004765!1.53e-22!101;UBERON:0001434!1.53e-22!101;UBERON:0001049!6.34e-16!57;UBERON:0005068!6.34e-16!57;UBERON:0006241!6.34e-16!57;UBERON:0007135!6.34e-16!57;UBERON:0003080!1.16e-12!42;UBERON:0002780!2.83e-12!41;UBERON:0001890!2.83e-12!41;UBERON:0006240!2.83e-12!41;UBERON:0002616!4.53e-12!59;UBERON:0003081!2.61e-10!216;UBERON:0002020!8.48e-10!34;UBERON:0003528!8.48e-10!34;UBERON:0001893!1.37e-09!34;UBERON:0002791!2.45e-09!33;UBERON:0003075!2.64e-09!86;UBERON:0007284!2.64e-09!86;UBERON:0001017!3.07e-09!82;UBERON:0000955!3.75e-09!69;UBERON:0006238!3.75e-09!69;UBERON:0005743!9.87e-09!86;UBERON:0001869!1.53e-08!32;UBERON:0002346!3.26e-08!90;UBERON:0002619!2.23e-07!22;UBERON:0000073!5.85e-07!94;UBERON:0001016!5.85e-07!94;UBERON:0002204!8.93e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;2.15e-10;114!UBERON:0002780;4.74e-09;41!UBERON:0001890;4.74e-09;41!UBERON:0000073;3.14e-08;53!UBERON:0002616;3.14e-08;53!UBERON:0001893;3.89e-08;34!UBERON:0003528;6.45e-08;34!UBERON:0002020;6.45e-08;34!UBERON:0002791;1.73e-07;32!UBERON:0001869;3.28e-07;32!UBERON:0000125;8.14e-07;9!UBERON:0002308;8.14e-07;9!UBERON:0002420;9.76e-07;9!UBERON:0007245;9.76e-07;9!UBERON:0010009;9.76e-07;9!UBERON:0010011;9.76e-07;9!UBERON:0000454;9.76e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.13e-50,98;UBERON:0003061,2.13e-50,98;UBERON:0002193,1.74e-45,108;UBERON:0002371,1.89e-42,76;UBERON:0002405,2.62e-40,93;UBERON:0007023,8.48e-39,114;UBERON:0001474,1.97e-37,82;UBERON:0004765,7.85e-32,90;UBERON:0001434,4.83e-27,100;UBERON:0003081,1.39e-15,203;UBERON:0001049,5.87e-15,56;UBERON:0005068,5.87e-15,56;UBERON:0006241,5.87e-15,56;UBERON:0007135,5.87e-15,56;UBERON:0000073,1.86e-13,53;UBERON:0002616,1.86e-13,53;UBERON:0002780,2.39e-12,41;UBERON:0001890,2.39e-12,41;UBERON:0003080,2.39e-12,41;UBERON:0006240,2.39e-12,41;UBERON:0003528,1.59e-09,34;UBERON:0002020,1.59e-09,34;UBERON:0001893,2.65e-09,34;UBERON:0003075,2.93e-09,82;UBERON:0007284,2.93e-09,82;UBERON:0002204,1.83e-08,167;UBERON:0002791,1.98e-08,32;UBERON:0000955,2.09e-08,68;UBERON:0006238,2.09e-08,68;UBERON:0002346,2.89e-08,86;UBERON:0001017,3.49e-08,81;UBERON:0001869,3.82e-08,32;UBERON:0000125,7.80e-07,9;UBERON:0002308,7.80e-07,9;UBERON:0002420,9.28e-07,9;UBERON:0007245,9.28e-07,9;UBERON:0010009,9.28e-07,9;UBERON:0010011,9.28e-07,9;UBERON:0000454,9.28e-07,9 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01697543935533,0,0,0,0,0,0,0,0,0,0,0,0,11.8009283054671,9.97956435052753,11.7660253720218,0,0,0,0,0,8.51441274071057,33.7937199204445,13.0353890855592,18.8799457522791,96.0597384489275,80.9734165047449,74.4393390462799,12.9404432513813,15.4929136912412,16.9808842831471,18.3618939155491,15.6243797448294,27.8735733805593,29.0569316245372,25.8722313594392,31.6886188050704,15.1688099524112,21.9464792418501,47.3992703080196,13.7416907866101,15.0098382531815,21.7981779911732,14.9981107261742,26.3161802202397,33.8848676673492,31.9955761181115,37.6986312904884,40.0651265500733,18.863600510858,22.1280237629545,42.9747351806947,21.6073852120799,30.2460092683717,29.9720605693061,7.26479403160043,22.4649357952414,23.4182166706254,6.5489138756702,8.2915676986367,13.6278119580444,23.0273693850315,19.0724653908713,26.1982706316241,2.28010194992999,5.17183360717634,5.11459630540975,0,2.18455444504853,0,3.41384178053206,0.400395987036012,3.4485146397269,1.98313461835459,1.90810750907073,1.70763890732835,2.34894875748376,4.20500550937752,1.32171328579026,2.24203425192614,10.271979306228,0.393419540227666,0,0.822405995998037,10.0311897234407,0.977766799900771,0,0,4.12218690475142,0.883817722424512,0.221533894583621,0.541607727530031,2.17755243533648,3.38154303655683,14.1416597959161,18.5154511916518,28.1108993163001,0.741432815810302,0.802622484269139,3.1360657141493,7.93165398882963,0.383220493601921,0.68725489096526,0.253019692019503,0.95569624297229,0.651083453856419,0,2.40920190524436,2.17577238962511,1.24930726552346,2.8413270245282,2.46338399076314,1.20964045934839,1.60464117470104,0.579297615531196,0,0,0,0,0,0,0,0,0,0,0.087834785693126,2.0956652079634,0,0,9.41187441598582,12.363211348248,15.9549552622638,44.1207654964883,37.7516641114884,54.604252695446,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.8602375692457,15.511210565933,0,0,0,0,0,0.354668382198357,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121973706129595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.96565443335525,0.590789906681404,2.20731549707325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,116.706860885426,20.8263795973922,55.4394235336956,0,0,0,0,0,0,0,0.176096868026452,1.4512968087854,0.288239906833923,1.76739406796932,0.063497894292169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,96.0827867065405,130.586843772353,86.441915188043,0,0,0,0,0,0,15.3556647271132,2.36436912242313,2.15627574859517,2.56686072559497,0.254094624222463,0,0,0.335032530668698,0,4.49404214368309,8.97484377612075,18.6486981046216,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.9248652538986,8.19713963110744,4.90946765895844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,4.01859945426117,0,0,0,0,0,0,0,0,0,0,0,0.170453254832202,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0,0.422215270595328,0,0,0,0,0.670302275535787,0,3.48332062874083,0,0,0,0,3.04468565539302,5.35246044999663,4.5571774973933,6.19402616190251,6.58179636937911,4.53931317834902,3.7802200606668,5.55187623405989,0,0,0,5.38829207864584,61.7472231539184,0.569134746787313,2.8696729091188,17.7625640575207,2.48956981172077,71.9690181261202,20.7758041775716,12.3550758369922,117.312625023061,30.8659394672856,47.6205506471128,0,24.4093874157623,31.4807543218034,25.5507742614196,31.2589863727746,11.3679082794129,13.420566473545,10.8451942112741,38.882230985006,0,0,0,1.6653598399891,0,0,5.71381899160387,0,1.33732061132974,0,0.71623345421307,0.296964680832639,0.307160702099232,6.95903353436409,6.33012373847307,0,0,0,3.98495976502139,13.8141957765574,0,0,0,0,0,0,41.4373619883766,1.87422470710174,2.3948309234694,0,0.969332746095218,3.6179558283122,0,0,0,3.62499787717397,0,0,0,0,0,0,3.54296554325536,4.34147179051469,1.52581736317083,0.884634079449797,0.886642856860642,1.53569778007781,0,0,2.92410982314429,0.569710279235006,0,0,0,0.638002319463839,0.457987967009312,4.26427820814908,27.5921905128489,17.4248084598477,0,0,0,0,0,0.317873157960757,0,0,0,0,2.98578579323551,4.77670848318032,0.611030144933625,0,0,0,10.9189835428697,0.802577647298789,3.51396668588009,0.364909578431332,0,0,0.789168805698781,0,0.61214552326098,16.8076301811778,0,0,0,0,0,0,0,0,0,0,0,3.4945333648406,0,0,0,0,2.03676934625681,0,0.225980740780532,0,0,2.15256706249988,0,0,2.98834192635094,0,0,0,0,0,0,0,0,0,0,0,7.80546375322726,12.0476733424954,148.186042157688,0,0,3.6306712165393,3.20824593616357,4.30723814746088,1.19807400299395,0.858452096273142,1.78537165953498,1.14211903227435,0,0,0,0,0,0,0,3.97614844904652,7.49118733613666,0,0,0,8.32403398740552,7.7380195455795,3.21972650287531,0,2.12775409707835,1.31136470337495,0,0,0,2.85878130549347,1.32418394073086,0,0,0,0,0,0,0,0,0.879313402068495,0,8.66195807622389,7.80172350281871,0,0,4.16470909014009,0.943225830597996,4.14239055347196,5.95399226174341,0.197611631897944,0,0,0,0.5013797880454,0.306345576763462,0,0,0.8860681799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| 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| ||
|short_description=p1@TRPM2 | |||
}} | }} |
Latest revision as of 18:51, 18 September 2015
Short description: | p1@TRPM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TRPM2_5end |
Coexpression cluster: | C4081_granulocyte_Monocytederived_acute_Macrophage_CD14_Dendritic_biphenotypic |
Association with transcript: | 8bp_to_NM_003307, NR_038257, uc002zew.1, uc010gpt.1_5end |
EntrezGene: | TRPM2 |
HGNC: | 12339 |
UniProt: | O94759Q5KTC1Q14DR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 1.11e-54 | 108 |
common myeloid progenitor | 1.11e-54 | 108 |
myeloid leukocyte | 1.18e-53 | 72 |
hematopoietic stem cell | 1.25e-52 | 168 |
macrophage dendritic cell progenitor | 7.18e-52 | 61 |
monopoietic cell | 1.89e-50 | 59 |
monocyte | 1.89e-50 | 59 |
monoblast | 1.89e-50 | 59 |
promonocyte | 1.89e-50 | 59 |
granulocyte monocyte progenitor cell | 7.78e-50 | 67 |
hematopoietic cell | 9.61e-48 | 177 |
hematopoietic oligopotent progenitor cell | 1.85e-47 | 161 |
hematopoietic multipotent progenitor cell | 1.85e-47 | 161 |
leukocyte | 1.57e-45 | 136 |
myeloid lineage restricted progenitor cell | 4.58e-45 | 66 |
defensive cell | 8.73e-44 | 48 |
phagocyte | 8.73e-44 | 48 |
nongranular leukocyte | 6.76e-39 | 115 |
classical monocyte | 2.73e-37 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.73e-37 | 42 |
hematopoietic lineage restricted progenitor cell | 2.05e-35 | 120 |
macrophage | 7.96e-08 | 6 |
intermediate monocyte | 1.43e-07 | 9 |
CD14-positive, CD16-positive monocyte | 1.43e-07 | 9 |
granulocyte | 2.47e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.65e-10 | 39 |
myeloid leukemia | 6.57e-08 | 31 |
hematologic cancer | 4.61e-07 | 51 |
immune system cancer | 4.61e-07 | 51 |