FFCP PHASE1:Hg19::chrX:101771631..101771638,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=11013 | |EntrezGene=11013 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30744 | |HGNC=30744 | ||
|TSSclassifier=strong | |||
|UniProt=P0CG34,P0CG35 | |UniProt=P0CG34,P0CG35 | ||
|association_with_transcript=60bp_to_NM_021992,uc004eje.2_5end | |||
|cluster_id=chrX:101771631..101771638,- | |||
|coexpression_cluster_id=C4711 | |||
|description=CAGE_peak_2_at_TMSB15A_5end | |||
|id=chrX:101771631..101771638,- | |||
|ontology_enrichment_celltype=CL:0002319!1.16e-15!25;CL:0000133!1.40e-15!59;CL:0000047!3.11e-15!8;CL:0000540!5.05e-12!6;CL:0000031!5.05e-12!6;CL:0000404!5.05e-12!6;CL:0000221!1.28e-11!71;CL:0002322!4.91e-09!5;CL:0000055!2.57e-08!180;CL:0000333!1.32e-07!41;CL:0000393!1.57e-07!60;CL:0000211!1.57e-07!60 | |||
|ontology_enrichment_celltype_v019=CL:0000540;7.59e-34;6!CL:0000404;7.59e-34;6!CL:0002319;6.60e-32;25!CL:0000047;8.33e-12;2!CL:0000123;1.64e-11;2!CL:0000242;1.64e-11;2!CL:0000333;1.79e-10;5!CL:0002553;3.22e-07;1!CL:0000095;6.56e-07;17 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,6.17e-44,8;CL:0000540,6.27e-34,6;CL:0000031,6.27e-34,6;CL:0000404,6.27e-34,6;CL:0002319,4.86e-32,25;CL:0000133,2.02e-28,59;CL:0000221,1.09e-22,72;CL:0000242,1.19e-11,2;CL:0000333,6.81e-11,41;CL:0002553,3.32e-07,1;CL:0000095,5.76e-07,17;CL:0000123,5.76e-07,17 | |||
|ontology_enrichment_development_v019=CL:0000031;7.59e-34;6!CL:0000133;5.68e-16;59!CL:0000221;3.72e-09;72 | |||
|ontology_enrichment_disease=DOID:5409!5.23e-07!4 | |||
|ontology_enrichment_disease_v019=DOID:169;8.34e-09;6 | |||
|ontology_enrichment_disease_v019_2=DOID:169,6.39e-09,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!7.66e-08!94;UBERON:0001016!7.66e-08!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0000013;1.79e-10;5!UBERON:0002410;1.79e-10;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,7.64e-14,89;UBERON:0000013,1.29e-10,5;UBERON:0002410,1.29e-10,5;UBERON:0004121,1.58e-10,171;UBERON:0000924,1.58e-10,171;UBERON:0006601,1.58e-10,171;UBERON:0001017,2.79e-10,81 | |||
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| ||
|short_description=p2@TMSB15A | |||
}} | }} |
Latest revision as of 18:50, 18 September 2015
Short description: | p2@TMSB15A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TMSB15A_5end |
Coexpression cluster: | C4711_Neurons_duodenum_occipital_parietal_temporal_brain_neuroblastoma |
Association with transcript: | 60bp_to_NM_021992, uc004eje.2_5end |
EntrezGene: | TMSB15A |
HGNC: | 30744 |
UniProt: | P0CG34P0CG35 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 6.17e-44 | 8 |
neuron | 6.27e-34 | 6 |
neuroblast | 6.27e-34 | 6 |
electrically signaling cell | 6.27e-34 | 6 |
neural cell | 4.86e-32 | 25 |
neurectodermal cell | 2.02e-28 | 59 |
ectodermal cell | 1.09e-22 | 72 |
Merkel cell | 1.19e-11 | 2 |
migratory neural crest cell | 6.81e-11 | 41 |
lung fibroblast | 3.32e-07 | 1 |
neuron associated cell | 5.76e-07 | 17 |
neuron associated cell (sensu Vertebrata) | 5.76e-07 | 17 |
Ontology term | p-value | n |
---|---|---|
nervous system | 7.64e-14 | 89 |
sympathetic nervous system | 1.29e-10 | 5 |
autonomic nervous system | 1.29e-10 | 5 |
ectoderm-derived structure | 1.58e-10 | 171 |
ectoderm | 1.58e-10 | 171 |
presumptive ectoderm | 1.58e-10 | 171 |
central nervous system | 2.79e-10 | 81 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.39e-09 | 6 |