FFCP PHASE1:Hg19::chr11:62037622..62037637,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr11:62037622..62037637,+
|short_description=p1@SCGB2A2
|description=CAGE_peak_1_at_SCGB2A2_5end
|association_with_transcript=0bp_to_ENST00000227918,ENST000005...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4250 | |EntrezGene=4250 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7050 | |HGNC=7050 | ||
|UniProt=Q13296, | |TSSclassifier=strong | ||
|UniProt=Q13296,Q6NX70 | |||
|association_with_transcript=0bp_to_ENST00000227918,ENST00000525380,NM_002411,uc001ntc.2,uc009ynx.2_5end | |||
|cluster_id=chr11:62037622..62037637,+ | |||
|coexpression_cluster_id=C1639 | |||
|description=CAGE_peak_1_at_SCGB2A2_5end | |||
|id=chr11:62037622..62037637,+ | |||
|ontology_enrichment_celltype=CL:0002274!1.19e-09!5;CL:0000457!1.19e-09!5;CL:0002191!1.19e-09!5;CL:0000097!1.19e-09!5;CL:0000831!1.19e-09!5;CL:0002028!1.19e-09!5;CL:0002541!5.06e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0000097;1.24e-16;5!CL:0000163;1.77e-09;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.24e-16,5;CL:0002028,1.24e-16,5;CL:0000163,1.77e-09,9 | |||
|ontology_enrichment_development_v019=UBERON:0004874;2.59e-10;1!UBERON:0009143;4.44e-10;1!UBERON:0006298;5.79e-10;1!UBERON:0008801;9.40e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003408!1.13e-16!10;UBERON:0001044!5.34e-13!6;UBERON:0003293!5.34e-13!6;UBERON:0003294!5.34e-13!6;UBERON:0010047!5.34e-13!6;UBERON:0000167!5.34e-13!6;UBERON:0001829!1.23e-10!2;UBERON:0000341!1.98e-10!2;UBERON:0000078!4.30e-09!18;UBERON:0007023!3.11e-08!115;UBERON:0001042!6.99e-08!10;UBERON:0009145!6.99e-08!10;UBERON:0000974!9.85e-08!10;UBERON:0000166!1.06e-07!21;UBERON:0006562!3.62e-07!11;UBERON:0000476!5.06e-07!3;UBERON:0000920!5.06e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001829;5.57e-18;2!UBERON:0001044;1.37e-13;6!UBERON:0003293;1.37e-13;6!UBERON:0003294;1.37e-13;6!UBERON:0010047;1.37e-13;6!UBERON:0003408;1.37e-13;6!UBERON:0000167;1.37e-13;6!UBERON:0000989;2.59e-10;1!UBERON:0008811;2.59e-10;1!UBERON:0002372;2.84e-10;1!UBERON:0001961;2.84e-10;1!UBERON:0001744;2.84e-10;1!UBERON:0001042;2.84e-10;1!UBERON:0001735;2.84e-10;1!UBERON:0007029;3.71e-10;1!UBERON:0001041;3.88e-10;14!UBERON:0001736;5.79e-10;1!UBERON:0000996;5.79e-10;1!UBERON:0006834;9.40e-10;1!UBERON:0001831;9.40e-10;1!UBERON:0001567;9.40e-10;1!UBERON:0000165;1.34e-07;28!UBERON:0000161;1.51e-07;19!UBERON:0000166;1.51e-07;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001829,5.82e-18,2;UBERON:0003408,4.94e-14,10;UBERON:0001044,1.40e-13,6;UBERON:0003293,1.40e-13,6;UBERON:0003294,1.40e-13,6;UBERON:0010047,1.40e-13,6;UBERON:0000167,1.40e-13,6;UBERON:0000989,2.59e-10,1;UBERON:0008811,2.59e-10,1;UBERON:0006258,2.59e-10,1;UBERON:0005876,2.59e-10,1;UBERON:0004874,2.59e-10,1;UBERON:0002372,2.84e-10,1;UBERON:0001961,2.84e-10,1;UBERON:0001744,2.84e-10,1;UBERON:0001735,2.84e-10,1;UBERON:0007029,3.71e-10,1;UBERON:0001736,4.85e-10,1;UBERON:0006298,4.85e-10,1;UBERON:0000996,5.30e-10,1;UBERON:0006834,7.55e-10,1;UBERON:0000166,1.01e-09,22;UBERON:0001831,1.17e-09,1;UBERON:0001567,1.17e-09,1;UBERON:0008801,1.17e-09,1;UBERON:0007023,5.03e-09,114;UBERON:0001042,2.53e-08,10;UBERON:0009145,2.53e-08,10;UBERON:0000161,3.27e-08,36;UBERON:0006562,1.31e-07,11;UBERON:0000165,2.48e-07,29;UBERON:0000930,2.48e-07,29 | |||
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|short_description=p1@SCGB2A2 | |||
}} | }} |
Latest revision as of 18:45, 18 September 2015
Short description: | p1@SCGB2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_SCGB2A2_5end |
Coexpression cluster: | C1639_breast_small_left_adipose_cervix_thyroid_vagina |
Association with transcript: | 0bp_to_ENST00000227918, ENST00000525380, NM_002411, uc001ntc.2, uc009ynx.2_5end |
EntrezGene: | SCGB2A2 |
HGNC: | 7050 |
UniProt: | Q13296Q6NX70 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.24e-16 | 5 |
basophil mast progenitor cell | 1.24e-16 | 5 |
endocrine cell | 1.77e-09 | 9 |
Ontology term | p-value | n |
---|---|---|
major salivary gland | 5.82e-18 | 2 |
gland of gut | 4.94e-14 | 10 |
saliva-secreting gland | 1.40e-13 | 6 |
gland of oral region | 1.40e-13 | 6 |
gland of foregut | 1.40e-13 | 6 |
oral gland | 1.40e-13 | 6 |
oral cavity | 1.40e-13 | 6 |
penis | 2.59e-10 | 1 |
intromittent organ | 2.59e-10 | 1 |
lateral plate mesenchyme | 2.59e-10 | 1 |
undifferentiated genital tubercle | 2.59e-10 | 1 |
somatopleure | 2.59e-10 | 1 |
tonsil | 2.84e-10 | 1 |
mucosa-associated lymphoid tissue | 2.84e-10 | 1 |
lymphoid tissue | 2.84e-10 | 1 |
tonsillar ring | 2.84e-10 | 1 |
surface | 3.71e-10 | 1 |
submandibular gland | 4.85e-10 | 1 |
submandibular gland primordium | 4.85e-10 | 1 |
vagina | 5.30e-10 | 1 |
uterus or analog | 7.55e-10 | 1 |
oral opening | 1.01e-09 | 22 |
parotid gland | 1.17e-09 | 1 |
cheek | 1.17e-09 | 1 |
parotid gland primordium | 1.17e-09 | 1 |
adult organism | 5.03e-09 | 114 |
chordate pharynx | 2.53e-08 | 10 |
pharyngeal region of foregut | 2.53e-08 | 10 |
orifice | 3.27e-08 | 36 |
pharynx | 1.31e-07 | 11 |
mouth | 2.48e-07 | 29 |
stomodeum | 2.48e-07 | 29 |