FFCP PHASE1:Hg19::chr11:62009732..62009752,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10647 | |EntrezGene=10647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18396 | |HGNC=18396 | ||
|TSSclassifier=strong | |||
|UniProt=O95969 | |UniProt=O95969 | ||
|association_with_transcript=8bp_to_NM_006551,uc001ntb.2_5end | |association_with_transcript=8bp_to_NM_006551,uc001ntb.2_5end | ||
|cluster_id=chr11:62009732..62009752,+ | |||
|coexpression_cluster_id=C101 | |coexpression_cluster_id=C101 | ||
|description=CAGE_peak_3_at_SCGB1D2_5end | |description=CAGE_peak_3_at_SCGB1D2_5end | ||
|id=chr11:62009732..62009752,+ | |id=chr11:62009732..62009752,+ | ||
|ontology_enrichment_celltype=CL:0000039!1.14e-08!7;CL:0000586!1.14e-08!7 | |ontology_enrichment_celltype=CL:0000039!1.14e-08!7;CL:0000586!1.14e-08!7 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.16e-21;7!CL:0000586;1.16e-21;7!CL:0000123;9.46e-10;2!CL:0000242;9.46e-10;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,1.16e-21,7;CL:0000586,1.16e-21,7;CL:0000242,9.46e-10,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;1.96e-26;10!UBERON:0005564;1.96e-26;10!UBERON:0010226;1.22e-17;1!UBERON:0007297;8.69e-10;2 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:3095;2.58e-07;22!DOID:2994;2.58e-07;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,2.58e-07,22;DOID:2994,2.58e-07,22 | |||
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| ||
|short_description=p3@SCGB1D2 | |short_description=p3@SCGB1D2 | ||
}} | }} |
Latest revision as of 18:42, 18 September 2015
Short description: | p3@SCGB1D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SCGB1D2_5end |
Coexpression cluster: | C101_small_cerebellum_maxillary_colon_parietal_epididymis_merkel |
Association with transcript: | 8bp_to_NM_006551, uc001ntb.2_5end |
EntrezGene: | SCGB1D2 |
HGNC: | 18396 |
UniProt: | O95969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 1.16e-21 | 7 |
germ cell | 1.16e-21 | 7 |
Merkel cell | 9.46e-10 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 2.37e-53 | 11 |
testis | 7.09e-33 | 8 |
male organism | 1.06e-26 | 22 |
male reproductive system | 1.06e-26 | 22 |
male genital duct | 2.94e-23 | 3 |
internal male genitalia | 2.94e-23 | 3 |
epididymis | 3.16e-18 | 1 |
vas deferens | 6.23e-18 | 1 |
spermatic cord | 6.23e-18 | 1 |
duct of male reproductive system | 1.03e-17 | 4 |
heart left ventricle | 1.22e-17 | 1 |
cardiac ventricle | 1.22e-17 | 1 |
future cardiac ventricle | 1.22e-17 | 1 |
gonad | 8.65e-13 | 21 |
indifferent external genitalia | 8.65e-13 | 21 |
indifferent gonad | 8.65e-13 | 21 |
gonad primordium | 8.65e-13 | 21 |
external genitalia | 3.18e-12 | 22 |
reproductive organ | 3.51e-12 | 48 |
reproductive structure | 7.13e-10 | 59 |
reproductive system | 7.13e-10 | 59 |
body cavity precursor | 1.16e-07 | 54 |
medulla oblongata | 6.88e-07 | 3 |
myelencephalon | 6.88e-07 | 3 |
future myelencephalon | 6.88e-07 | 3 |
anatomical cavity | 8.84e-07 | 61 |
cardiac chamber | 9.64e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 2.58e-07 | 22 |
germ cell cancer | 2.58e-07 | 22 |