FFCP PHASE1:Hg19::chr11:62009704..62009716,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10647 | |EntrezGene=10647 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18396 | |HGNC=18396 | ||
|TSSclassifier=strong | |||
|UniProt=O95969 | |UniProt=O95969 | ||
|association_with_transcript=-7bp_to_NM_006551,uc001ntb.2_5end | |association_with_transcript=-7bp_to_NM_006551,uc001ntb.2_5end | ||
|cluster_id=chr11:62009704..62009716,+ | |||
|coexpression_cluster_id=C1639 | |||
|description=CAGE_peak_2_at_SCGB1D2_5end | |description=CAGE_peak_2_at_SCGB1D2_5end | ||
|id=chr11:62009704..62009716,+ | |id=chr11:62009704..62009716,+ | ||
|ontology_enrichment_celltype=CL:0002274!3.28e-07!5;CL:0000457!3.28e-07!5;CL:0002191!3.28e-07!5;CL:0000097!3.28e-07!5;CL:0000831!3.28e-07!5;CL:0002028!3.28e-07!5 | |ontology_enrichment_celltype=CL:0002274!3.28e-07!5;CL:0000457!3.28e-07!5;CL:0002191!3.28e-07!5;CL:0000097!3.28e-07!5;CL:0000831!3.28e-07!5;CL:0002028!3.28e-07!5 | ||
|ontology_enrichment_celltype_v019=CL:0000097;1.15e-22;5!CL:0000163;6.93e-13;9!CL:0000123;1.36e-07;2!CL:0000242;1.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,1.15e-22,5;CL:0002028,1.15e-22,5;CL:0000163,6.93e-13,9;CL:0000242,1.36e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0007297;1.12e-07;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.31e-31!115;UBERON:0002298!3.97e-15!8;UBERON:0001896!2.19e-11!3;UBERON:0005290!2.19e-11!3;UBERON:0010096!2.19e-11!3;UBERON:0003133!4.57e-08!48;UBERON:0002950!5.50e-08!2;UBERON:0001891!5.50e-08!2;UBERON:0009616!5.50e-08!2;UBERON:0003135!5.64e-08!11;UBERON:0004175!6.44e-08!25;UBERON:0002360!2.37e-07!2;UBERON:0000094!2.37e-07!2;UBERON:0007645!2.37e-07!2;UBERON:0005156!3.19e-07!59;UBERON:0000990!3.19e-07!59;UBERON:0001049!6.82e-07!57;UBERON:0005068!6.82e-07!57;UBERON:0006241!6.82e-07!57;UBERON:0007135!6.82e-07!57;UBERON:0005743!7.26e-07!86 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;1.45e-17;3!UBERON:0004054;1.45e-17;3!UBERON:0004175;7.91e-15;21!UBERON:0001301;4.53e-14;1!UBERON:0006834;5.85e-14;1!UBERON:0005795;8.57e-14;1!UBERON:0002372;1.51e-13;1!UBERON:0001000;1.51e-13;1!UBERON:0000996;1.51e-13;1!UBERON:0001961;1.51e-13;1!UBERON:0001744;1.51e-13;1!UBERON:0005352;1.51e-13;1!UBERON:0001042;1.51e-13;1!UBERON:0001735;1.51e-13;1!UBERON:0005904;2.01e-13;4!UBERON:0006562;2.05e-07;2!UBERON:0003975;7.92e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,1.18e-17,3;UBERON:0004054,1.18e-17,3;UBERON:0001301,4.53e-14,1;UBERON:0006834,5.85e-14,1;UBERON:0001000,1.10e-13,1;UBERON:0005352,1.10e-13,1;UBERON:0000996,1.42e-13,1;UBERON:0005904,1.72e-13,4;UBERON:0002372,1.83e-13,1;UBERON:0001961,1.83e-13,1;UBERON:0001744,1.83e-13,1;UBERON:0001735,1.83e-13,1;UBERON:0004175,1.75e-12,25 | |||
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| ||
|short_description=p2@SCGB1D2 | |short_description=p2@SCGB1D2 | ||
}} | }} |
Latest revision as of 18:42, 18 September 2015
Short description: | p2@SCGB1D2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SCGB1D2_5end |
Coexpression cluster: | C1639_breast_small_left_adipose_cervix_thyroid_vagina |
Association with transcript: | -7bp_to_NM_006551, uc001ntb.2_5end |
EntrezGene: | SCGB1D2 |
HGNC: | 18396 |
UniProt: | O95969 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 1.15e-22 | 5 |
basophil mast progenitor cell | 1.15e-22 | 5 |
endocrine cell | 6.93e-13 | 9 |
Merkel cell | 1.36e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male genital duct | 1.18e-17 | 3 |
internal male genitalia | 1.18e-17 | 3 |
epididymis | 4.53e-14 | 1 |
uterus or analog | 5.85e-14 | 1 |
vas deferens | 1.10e-13 | 1 |
spermatic cord | 1.10e-13 | 1 |
vagina | 1.42e-13 | 1 |
duct of male reproductive system | 1.72e-13 | 4 |
tonsil | 1.83e-13 | 1 |
mucosa-associated lymphoid tissue | 1.83e-13 | 1 |
lymphoid tissue | 1.83e-13 | 1 |
tonsillar ring | 1.83e-13 | 1 |
internal genitalia | 1.75e-12 | 25 |