FFCP PHASE1:Hg19::chr19:46142680..46142689,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr19:46142680..46142689,- to FFCP PHASE1:Hg19::chr19:46142680..46142689,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=24139 | |EntrezGene=24139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18035 | |HGNC=18035 | ||
|TSSclassifier=strong | |||
|UniProt=O95834 | |UniProt=O95834 | ||
|association_with_transcript=-5bp_to_NM_012155,NR_034098_5end | |||
|cluster_id=chr19:46142680..46142689,- | |||
|description=CAGE_peak_6_at_EML2_5end | |||
|id=chr19:46142680..46142689,- | |||
|ontology_enrichment_celltype=CL:0002077!1.92e-07!33;CL:0000066!5.77e-07!254 | |||
|ontology_enrichment_celltype_v019=CL:0002567;8.63e-13;3!CL:0000240;1.42e-10;6!CL:0000311;1.42e-10;6!CL:0000079;1.42e-10;6!CL:0000237;1.42e-10;6!CL:0000575;1.18e-09;2!CL:0002077;1.77e-08;34!CL:0000312;1.50e-07;5!CL:0002159;5.27e-07;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002567,1.12e-12,3;CL:0000240,2.21e-10,6;CL:0000311,2.21e-10,6;CL:0000079,2.21e-10,6;CL:0000237,2.21e-10,6;CL:0000036,2.21e-10,6;CL:0000357,2.21e-10,6;CL:0000114,2.21e-10,6;CL:0002077,6.29e-10,34;CL:0000575,1.10e-09,2;CL:0000312,1.70e-07,5;CL:0000066,4.88e-07,253;CL:0002159,5.54e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000357;1.42e-10;6!CL:0000114;1.42e-10;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0000964;2.54e-10;4!UBERON:0010409;2.54e-10;4!UBERON:0004909;9.28e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000964,2.54e-10,4;UBERON:0010409,2.54e-10,4;UBERON:0004348,2.54e-10,4;UBERON:0005427,2.54e-10,4;UBERON:0004909,6.85e-09,2 | |||
|phase1_expression=0,0.642301571672949,0,0,0.446961094427288,0,0,0,0.261185628199839,0,1.39560233594486,0.655324116390517,0.791300934685361,0.247532705920093,0,0,0,0,0,0,0,0.313454721478088,0.286235987131057,0,0.125542639594803,0.305653622991805,0,0.157421562627358,0.786728553697808,0,0.154816123316076,0.919421224478927,1.204823675113,0.739508020333575,0,0,0,0,0,0,0,0,0.257575567634187,0,0,0.242584061187816,0,0,0,0.28769239232215,0,0.236482229888585,0,0,0,0,0.272906150057846,0.224723484445085,0,0,0,0,0,0,0,0,0,0.502497330513487,0,0,0,0,0,0,0.637812899895131,0.419317291016752,0.112328631146495,0,0,0.285012743741249,0.59675003159727,0.182664153764634,0,0,0,0,0,0,0,0,0.569212969109448,0,0,0,0,0,0,0,0.616804496998528,0.167186495390678,0.977766799900771,0,0,0.222820913770347,0.589211814949674,0.221533894583621,0,0.384273959177026,0.650296737799391,0.657751618414705,0.276350017785848,0.289803085735052,0.14828656316206,0,0,0.113309342697566,0.383220493601921,0.68725489096526,0,0.318565414324097,0.651083453856419,0,0.150575119077773,0.511946444617674,0,0.236777252044017,0.821127996921047,0,0,0.579297615531196,0,0,0,0,0,0.289693037921647,0.795285947051099,0,0.283604451492204,0,0.087834785693126,0.261958150995425,2.91436230634034,2.22470665670658,0.649094787309367,0.174129737299267,0.398873881556595,0,0.571994910780128,0,0,0,0,0,0,0,0,0.258416759169329,0.35576626268671,0,0.402829317109147,0,0,0,0,0,0.22452937262617,0,0,0,0,0,0,1.3082821564276,0.496971951695318,0.379891534993739,0.264818361626438,1.43418310374407,0.354668382198357,1.12135520028461,1.06748995729705,0.49333509683432,0,0,0,0.454072282934794,0.576175924479999,0,0.312160076830321,0.570471821544449,0,0.23486899728753,0.161872944368132,0,0.204154171254893,0,0.309977343527296,0,0,0,1.43723628363248,0,0.125118519871964,0.554128230968366,0,0,0.45071417671979,0.113432183160021,0.179389635688862,0,0,0,0.103052529238439,0.257640540045629,0,0.168776332241266,0.194874010322397,0,0.368199594569197,0.323292113637624,0,0,0,0.773043412653187,0,0.286804595389004,0,0.132529768321485,0,0.207322110030741,0,0,0,0,2.76269842704961,0,0,0.828147600278907,0.168584690078102,0.482022059766964,0.110293972732394,0,0.474541238222193,0.674156540800822,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0,1.20725313949488,1.1240175325762,1.20634766893957,1.11106134190236,0,2.07986957055916,0,0.231860809950154,0.234817388471643,0,0,0,0,0.858486162094873,0,0.702012795417713,0.297262324577456,0.93733833986777,0,0.283550194484773,1.16426079513703,0.871901815541886,1.53353071666084,0,0.792435906119034,0,0.432359860250884,0.12624243342638,0.507983154337352,1.14596527667483,1.17217447210047,3.4214489204541,1.33675740514321,0.901029173531752,0.571652865261156,0.112131084345361,0,0.1466765716419,0.258543431515556,0,0,0,0,0,0,0.532844358032199,0.428933980974443,0.542621605391443,0,0.325736184293735,0.355391948742546,0,0.602878754119172,0,0.099972991182057,1.2162378064119,1.00451418286425,0,0.239624855491583,0,0,0,0.205476322550383,0,0.560425719967636,0,0,0.256686072559497,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0.415941723061614,0.713715955188647,0.315404830067869,0.468565659970853,0,0,1.03473071292505,0.664225598535437,0.368738337083406,0.347534457872331,0.195801157462741,0.686286847621712,0.620304078368662,0,0.320182673410333,0,0,0.604780586659361,0.248107807818777,0.61384789315225,0,0,0,0.321707842287215,0,0.308419387605311,0.355123450626254,0.164254312027618,1.03850885836724,0.116210378459959,0,0.601519410909855,0.920809889358963,0.68888668898764,0.182091168006717,0.131124414959424,1.35359883872224,0.385076685522074,1.56869953835371,0,0.105551628892876,0,0,0,0,0.270946437543853,0.501689773854853,0.764628819135115,2.49322802678617,0.223874754722178,0.219259876645935,0,0.256450125116389,0,0.325378394664303,0.206082023295445,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0.170453254832202,0,0.991709492165869,1.15314040419064,1.14851441245126,1.31505115112215,0,1.25924938732256,0,0,1.06461206063404,0,0.74129687641568,0,0.372158369359667,0,0.38126038784765,1.02359116524534,0,0.318203247925937,0.78494864019923,0.359744915166629,0.274537029736055,0.471249609382746,0.202182481573316,0,0.842516912477962,0,0,1.05650146756755,0,0.707027159768564,0,0,0,0,0.578775534266688,0,0.405820753925408,0,0.281695602532241,0.143411352204052,0.0982490410131212,0.35667105148125,0.354761064070598,0.633322905892992,0,0,0.349934720244983,0.962221127255121,0.670302275535787,0,0.282431402330337,0,1.68471475667626,0.886860307073351,0.918893600827838,1.01489521846434,0,1.13929437434833,0,0,0,0,0,0,0,0.245040215981032,0.371606350251437,0.144269212976445,0.0711418433484141,0.159426272728822,0,0,0,0,0,0,0,0,0,0.321176150207399,0,0,0.343505344755765,0,0,0,0,0,0,0,0,1.4098700508785,0.935702702041099,0.146508179271894,0,0,0,0,0,1.22864280839693,0,0,0.111308705022906,0.494411622680279,0,0.398495976502139,0.276283915531148,0.251932747854276,0.102268682502155,0.123084805461069,0.311039587661807,0.359473404589307,0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| 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| ||
|short_description=p6@EML2 | |||
}} | }} |
Latest revision as of 18:41, 18 September 2015
Short description: | p6@EML2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_EML2_5end |
Coexpression cluster: | NA |
Association with transcript: | -5bp_to_NM_012155, NR_034098_5end |
EntrezGene: | EML2 |
HGNC: | 18035 |
UniProt: | O95834 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
light melanocyte | 1.12e-12 | 3 |
stratified squamous epithelial cell | 2.21e-10 | 6 |
keratin accumulating cell | 2.21e-10 | 6 |
stratified epithelial cell | 2.21e-10 | 6 |
keratinizing barrier epithelial cell | 2.21e-10 | 6 |
epithelial fate stem cell | 2.21e-10 | 6 |
stratified epithelial stem cell | 2.21e-10 | 6 |
surface ectodermal cell | 2.21e-10 | 6 |
ecto-epithelial cell | 6.29e-10 | 34 |
corneal epithelial cell | 1.10e-09 | 2 |
keratinocyte | 1.70e-07 | 5 |
epithelial cell | 4.88e-07 | 253 |
general ecto-epithelial cell | 5.54e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cornea | 2.54e-10 | 4 |
eye surface | 2.54e-10 | 4 |
optic eminence | 2.54e-10 | 4 |
corneal primordium | 2.54e-10 | 4 |
epithelium of gonad | 6.85e-09 | 2 |