FFCP PHASE1:Hg19::chr1:173991434..173991556,-: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=149041 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29434 | |||
|TSSclassifier=strong | |||
|UniProt= | |||
|association_with_transcript=0bp_to_ENST00000367696_5end | |||
|cluster_id=chr1:173991434..173991556,- | |||
|coexpression_cluster_id=C176 | |||
|description=CAGE_peak_1_at_RC3H1_5end | |||
|id=chr1:173991434..173991556,- | |||
|ontology_enrichment_celltype=CL:0000738!1.62e-42!140;CL:0000037!5.94e-38!172;CL:0000566!5.94e-38!172;CL:0002032!1.29e-35!165;CL:0000837!1.29e-35!165;CL:0002031!3.27e-34!124;CL:0000988!3.47e-33!182;CL:0002087!2.47e-32!119;CL:0000766!1.13e-26!76;CL:0000557!9.23e-24!71;CL:0000763!6.56e-23!112;CL:0000049!6.56e-23!112;CL:0002057!9.13e-22!42;CL:0000839!9.14e-22!70;CL:0002009!1.26e-20!65;CL:0000860!1.33e-20!45;CL:0002194!2.04e-19!63;CL:0000576!2.04e-19!63;CL:0000040!2.04e-19!63;CL:0000559!2.04e-19!63;CL:0000542!1.52e-11!53;CL:0000051!1.52e-11!53;CL:0000838!3.70e-11!52;CL:0000791!3.79e-07!18;CL:0000789!3.79e-07!18;CL:0002420!3.79e-07!18;CL:0002419!3.79e-07!18;CL:0000790!3.79e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.43e-17;33!CL:0002057;2.43e-17;33!CL:0000576;4.76e-15;48!CL:0000473;2.55e-13;39!CL:0000234;2.55e-13;39!CL:0000766;3.48e-12;69!CL:0002087;1.91e-11;104!CL:0000738;1.86e-09;136!CL:0000763;2.23e-07;100!CL:0000542;2.65e-07;53!CL:0000791;3.95e-07;18!CL:0000789;3.95e-07;18!CL:0002419;3.95e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,9.95e-44,136;CL:0000037,8.11e-39,168;CL:0002032,1.80e-36,161;CL:0000837,1.80e-36,161;CL:0002031,2.42e-35,120;CL:0000988,1.10e-34,177;CL:0002087,1.87e-33,115;CL:0000766,3.64e-28,72;CL:0000557,3.44e-25,67;CL:0000763,9.04e-24,108;CL:0000049,9.04e-24,108;CL:0000839,4.27e-23,66;CL:0002009,5.50e-22,61;CL:0000860,9.13e-22,42;CL:0002057,9.13e-22,42;CL:0002194,9.69e-21,59;CL:0000576,9.69e-21,59;CL:0000040,9.69e-21,59;CL:0000559,9.69e-21,59;CL:0000473,7.57e-20,48;CL:0000234,7.57e-20,48;CL:0000542,1.52e-11,53;CL:0000051,1.52e-11,53;CL:0000838,3.70e-11,52;CL:0000791,3.79e-07,18;CL:0000789,3.79e-07,18;CL:0002420,3.79e-07,18;CL:0002419,3.79e-07,18;CL:0000790,3.79e-07,18 | |||
|ontology_enrichment_development_v019=CL:0002057;5.56e-16;42!CL:0000051;2.65e-07;53!CL:0000790;3.95e-07;18!CL:0000049;6.39e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.26e-28!102;UBERON:0003061!7.26e-28!102;UBERON:0002193!2.83e-25!112;UBERON:0007023!5.41e-24!115;UBERON:0002371!7.16e-20!80;UBERON:0001474!1.38e-17!86;UBERON:0002405!4.54e-16!115;UBERON:0004765!3.45e-13!101;UBERON:0001434!3.45e-13!101;UBERON:0001049!9.61e-09!57;UBERON:0005068!9.61e-09!57;UBERON:0006241!9.61e-09!57;UBERON:0007135!9.61e-09!57;UBERON:0002780!1.21e-07!41;UBERON:0001890!1.21e-07!41;UBERON:0006240!1.21e-07!41;UBERON:0002616!1.43e-07!59;UBERON:0003080!2.37e-07!42;UBERON:0000178!3.10e-07!15;UBERON:0000179!3.10e-07!15;UBERON:0000463!3.10e-07!15;UBERON:0000955!6.74e-07!69;UBERON:0006238!6.74e-07!69 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.82e-07;15!UBERON:0000179;2.82e-07;15!UBERON:0000463;2.82e-07;15!UBERON:0007023;4.01e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,5.21e-29,98;UBERON:0003061,5.21e-29,98;UBERON:0002193,3.21e-26,108;UBERON:0007023,1.36e-23,114;UBERON:0002371,6.22e-21,76;UBERON:0002405,3.09e-20,93;UBERON:0001474,1.84e-18,82;UBERON:0004765,4.58e-15,90;UBERON:0001434,8.28e-13,100;UBERON:0001049,5.15e-09,56;UBERON:0005068,5.15e-09,56;UBERON:0006241,5.15e-09,56;UBERON:0007135,5.15e-09,56;UBERON:0000073,1.14e-08,53;UBERON:0002616,1.14e-08,53;UBERON:0002780,1.21e-07,41;UBERON:0001890,1.21e-07,41;UBERON:0003080,1.21e-07,41;UBERON:0006240,1.21e-07,41;UBERON:0000178,3.10e-07,15;UBERON:0000179,3.10e-07,15;UBERON:0000463,3.10e-07,15;UBERON:0000955,4.33e-07,68;UBERON:0006238,4.33e-07,68 | |||
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| |||
|short_description=p1@RC3H1 | |||
}} |
Latest revision as of 18:32, 18 September 2015
Short description: | p1@RC3H1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RC3H1_5end |
Coexpression cluster: | C176_Eosinophils_Neutrophils_Mast_CD14_CD4_Basophils_CD19 |
Association with transcript: | 0bp_to_ENST00000367696_5end |
EntrezGene: | RC3H1 |
HGNC: | 29434 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 5.21e-29 | 98 |
blood island | 5.21e-29 | 98 |
hemolymphoid system | 3.21e-26 | 108 |
adult organism | 1.36e-23 | 114 |
bone marrow | 6.22e-21 | 76 |
immune system | 3.09e-20 | 93 |
bone element | 1.84e-18 | 82 |
skeletal element | 4.58e-15 | 90 |
skeletal system | 8.28e-13 | 100 |
neural tube | 5.15e-09 | 56 |
neural rod | 5.15e-09 | 56 |
future spinal cord | 5.15e-09 | 56 |
neural keel | 5.15e-09 | 56 |
regional part of nervous system | 1.14e-08 | 53 |
regional part of brain | 1.14e-08 | 53 |
regional part of forebrain | 1.21e-07 | 41 |
forebrain | 1.21e-07 | 41 |
anterior neural tube | 1.21e-07 | 41 |
future forebrain | 1.21e-07 | 41 |
blood | 3.10e-07 | 15 |
haemolymphatic fluid | 3.10e-07 | 15 |
organism substance | 3.10e-07 | 15 |
brain | 4.33e-07 | 68 |
future brain | 4.33e-07 | 68 |