FFCP PHASE1:Hg19::chrX:10126304..10126343,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1183 | |EntrezGene=1183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2022 | |HGNC=2022 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_uc011mid.1_5end | |association_with_transcript=0bp_to_uc011mid.1_5end | ||
|cluster_id=chrX:10126304..10126343,+ | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_8_at_CLCN4_5end | |description=CAGE_peak_8_at_CLCN4_5end | ||
|id=chrX:10126304..10126343,+ | |id=chrX:10126304..10126343,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.08e-28!115;UBERON:0001049!5.39e-28!57;UBERON:0005068!5.39e-28!57;UBERON:0006241!5.39e-28!57;UBERON:0007135!5.39e-28!57;UBERON:0003075!4.43e-27!86;UBERON:0007284!4.43e-27!86;UBERON:0002616!6.20e-27!59;UBERON:0005743!8.71e-27!86;UBERON:0000073!2.62e-26!94;UBERON:0001016!2.62e-26!94;UBERON:0002346!1.10e-25!90;UBERON:0001017!1.99e-25!82;UBERON:0000955!6.29e-25!69;UBERON:0006238!6.29e-25!69;UBERON:0003080!3.51e-23!42;UBERON:0002780!2.83e-20!41;UBERON:0001890!2.83e-20!41;UBERON:0006240!2.83e-20!41;UBERON:0003056!2.86e-20!61;UBERON:0000033!1.80e-17!123;UBERON:0000153!1.85e-16!129;UBERON:0007811!1.85e-16!129;UBERON:0000200!2.12e-15!6;UBERON:0001869!2.90e-15!32;UBERON:0002619!1.26e-14!22;UBERON:0001893!2.72e-14!34;UBERON:0004121!4.30e-14!169;UBERON:0000924!1.17e-13!173;UBERON:0006601!1.17e-13!173;UBERON:0001905!4.17e-13!2;UBERON:0002757!4.17e-13!2;UBERON:0010134!4.17e-13!2;UBERON:0002784!4.17e-13!2;UBERON:0005408!4.17e-13!2;UBERON:0001899!4.17e-13!2;UBERON:0000956!8.34e-13!25;UBERON:0000203!8.34e-13!25;UBERON:0001950!2.01e-12!20;UBERON:0002360!2.88e-12!2;UBERON:0000094!2.88e-12!2;UBERON:0007645!2.88e-12!2;UBERON:0002791!5.62e-12!33;UBERON:0002298!7.35e-12!8;UBERON:0002020!1.36e-11!34;UBERON:0003528!1.36e-11!34;UBERON:0001872!1.09e-10!5;UBERON:0002771!9.09e-09!3;UBERON:0001896!1.62e-08!3;UBERON:0005290!1.62e-08!3;UBERON:0010096!1.62e-08!3;UBERON:0001894!3.07e-08!7;UBERON:0006222!3.07e-08!7;UBERON:0004733!9.68e-08!12;UBERON:0002028!9.68e-08!12;UBERON:0007277!9.68e-08!12;UBERON:0006122!1.65e-07!1;UBERON:0005418!1.75e-07!1;UBERON:0001389!1.75e-07!1;UBERON:0000026!1.75e-07!1;UBERON:0008784!1.75e-07!1;UBERON:0006058!1.75e-07!1;UBERON:0003663!1.75e-07!1;UBERON:0001383!1.75e-07!1;UBERON:0004256!1.75e-07!1;UBERON:0002529!1.75e-07!1;UBERON:0004708!1.75e-07!1;UBERON:0002101!1.75e-07!1;UBERON:0004709!1.75e-07!1;UBERON:0003661!1.75e-07!1;UBERON:0002471!1.75e-07!1;UBERON:0004357!1.75e-07!1;UBERON:0009872!1.75e-07!1;UBERON:0004347!1.75e-07!1;UBERON:0005420!1.75e-07!1;UBERON:0005732!1.75e-07!1;UBERON:0006057!1.75e-07!1;UBERON:0000978!1.75e-07!1;UBERON:0002103!1.75e-07!1;UBERON:0001665!1.75e-07!1;UBERON:0003823!1.75e-07!1;UBERON:0000154!1.75e-07!1;UBERON:0005733!1.75e-07!1;UBERON:0005730!1.75e-07!1;UBERON:0004732!3.76e-07!13;UBERON:0003112!4.57e-07!1;UBERON:0000032!4.57e-07!1;UBERON:0005253!4.57e-07!1;UBERON:0003128!4.57e-07!1;UBERON:0002241!4.57e-07!1;UBERON:0001703!4.57e-07!1;UBERON:0004761!4.57e-07!1;UBERON:0009617!4.57e-07!1;UBERON:0001871!4.96e-07!7;UBERON:0002902!5.14e-07!1;UBERON:0009899!5.14e-07!1;UBERON:0003296!5.79e-07!4;UBERON:0010133!5.79e-07!4;UBERON:0002581!6.49e-07!1;UBERON:0007190!8.67e-07!1;UBERON:0001882!9.18e-07!1;UBERON:0005403!9.18e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0000970;5.71e-21;20!UBERON:0002104;4.86e-20;21!UBERON:0000020;2.02e-18;23!UBERON:0001032;1.03e-17;24!UBERON:0004456;1.03e-17;24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,4.86e-20,21;UBERON:0002104,4.86e-20,21;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0000020,1.03e-17,24;UBERON:0001032,1.03e-17,24;UBERON:0004456,1.03e-17,24 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,6.7187951526057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.414415513436035,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0986434056369336,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0.110579259931225,0,0.219385397153973,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.500763722825999,0,0.332787154610557,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127894371303652,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0.138314504928436,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0675375846183947,0,0.206686796501184,0.0634158101939068,0,0,0,0,0,0.535701835878287,0.336283722218824,0,0,0,0,0,0.203909198930495,0.131545547125698,0,0,0,0,0,0,0,0,6.7187951526057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.647428837187895,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20686599172379,0,0,0,0,0,0,0.202117188958219,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@CLCN4 | |short_description=p8@CLCN4 | ||
}} | }} |
Latest revision as of 18:32, 18 September 2015
Short description: | p8@CLCN4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CLCN4_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | 0bp_to_uc011mid.1_5end |
EntrezGene: | CLCN4 |
HGNC: | 2022 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 4.86e-20 | 21 |
visual system | 4.86e-20 | 21 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
sense organ | 1.03e-17 | 24 |
sensory system | 1.03e-17 | 24 |
entire sense organ system | 1.03e-17 | 24 |