FFCP PHASE1:Hg19::chr7:45025815..45025835,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=285958 | |EntrezGene=285958 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=27797 | |HGNC=27797 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=400bp_to_uc003tmk.3_5end | |association_with_transcript=400bp_to_uc003tmk.3_5end | ||
|cluster_id=chr7:45025815..45025835,- | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_5_at_SNHG15_5end | |description=CAGE_peak_5_at_SNHG15_5end | ||
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|ontology_enrichment_celltype=CL:0000988!1.92e-18!182;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0002032!2.19e-17!165;CL:0000837!2.19e-17!165;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!1.91e-09!140;CL:0000453!3.21e-09!5;CL:0000990!1.87e-08!8;CL:0000063!3.54e-08!578;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000548!1.86e-07!679;CL:0000004!1.86e-07!679;CL:0000255!1.86e-07!679;CL:0000003!2.64e-07!722;CL:0000012!2.84e-07!682;CL:0000080!4.63e-07!6;CL:0002087!4.74e-07!119;CL:0000134!5.36e-07!358;CL:0000838!6.28e-07!52 | |ontology_enrichment_celltype=CL:0000988!1.92e-18!182;CL:0000037!1.20e-17!172;CL:0000566!1.20e-17!172;CL:0002032!2.19e-17!165;CL:0000837!2.19e-17!165;CL:0000763!3.18e-10!112;CL:0000049!3.18e-10!112;CL:0000738!1.91e-09!140;CL:0000453!3.21e-09!5;CL:0000990!1.87e-08!8;CL:0000063!3.54e-08!578;CL:0000542!1.43e-07!53;CL:0000051!1.43e-07!53;CL:0000548!1.86e-07!679;CL:0000004!1.86e-07!679;CL:0000255!1.86e-07!679;CL:0000003!2.64e-07!722;CL:0000012!2.84e-07!682;CL:0000080!4.63e-07!6;CL:0002087!4.74e-07!119;CL:0000134!5.36e-07!358;CL:0000838!6.28e-07!52 | ||
|ontology_enrichment_celltype_v019=CL:0001014;2.55e-22;2!CL:0001016;2.55e-22;2!CL:0000453;1.15e-19;5!CL:0000990;3.43e-11;8!CL:0000451;2.98e-09;10!CL:0000840;4.65e-08;5 | |ontology_enrichment_celltype_v019=CL:0001014;2.55e-22;2!CL:0001016;2.55e-22;2!CL:0000453;1.15e-19;5!CL:0000990;3.43e-11;8!CL:0000451;2.98e-09;10!CL:0000840;4.65e-08;5 | ||
|ontology_enrichment_celltype_v019_2=CL:0001014,1.66e-22,2;CL:0001016,1.66e-22,2;CL:0000453,5.74e-20,5;CL:0000990,2.34e-11,8;CL:0000988,4.04e-11,177;CL:0000451,2.18e-09,10;CL:0000840,4.04e-08,5;CL:0001029,4.04e-08,5;CL:0002032,1.38e-07,161;CL:0000837,1.38e-07,161;CL:0000037,3.40e-07,168 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:2531!8.75e-20!51;DOID:0060083!8.75e-20!51;DOID:1240!1.78e-14!39;DOID:8692!1.63e-11!31;DOID:0060058!2.73e-10!10;DOID:162!2.68e-07!235;DOID:14566!3.19e-07!239 | |ontology_enrichment_disease=DOID:2531!8.75e-20!51;DOID:0060083!8.75e-20!51;DOID:1240!1.78e-14!39;DOID:8692!1.63e-11!31;DOID:0060058!2.73e-10!10;DOID:162!2.68e-07!235;DOID:14566!3.19e-07!239 | ||
|ontology_enrichment_disease_v019=DOID:0060060;3.26e-12;1!DOID:0060061;3.26e-12;1!DOID:9119;3.26e-12;1!DOID:8691;3.26e-12;1!DOID:0060058;4.24e-10;10 | |ontology_enrichment_disease_v019=DOID:0060060;3.26e-12;1!DOID:0060061;3.26e-12;1!DOID:9119;3.26e-12;1!DOID:8691;3.26e-12;1!DOID:0060058;4.24e-10;10 | ||
|ontology_enrichment_disease_v019_2=DOID:2531,2.88e-12,51;DOID:0060083,2.88e-12,51;DOID:9119,2.93e-12,1;DOID:0060060,3.27e-12,1;DOID:0060061,3.27e-12,1;DOID:8691,3.27e-12,1;DOID:0060058,4.96e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001737!5.38e-14!9;UBERON:0001557!6.78e-08!19 | |ontology_enrichment_uberon=UBERON:0001737!5.38e-14!9;UBERON:0001557!6.78e-08!19 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-19;9!UBERON:0001557;8.83e-19;9!UBERON:0002331;5.61e-10;10!UBERON:0000178;8.12e-07;15!UBERON:0000179;8.12e-07;15!UBERON:0000463;8.12e-07;15 | |ontology_enrichment_uberon_v019=UBERON:0001737;8.83e-19;9!UBERON:0001557;8.83e-19;9!UBERON:0002331;5.61e-10;10!UBERON:0000178;8.12e-07;15!UBERON:0000179;8.12e-07;15!UBERON:0000463;8.12e-07;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,1.07e-18,9;UBERON:0002331,4.38e-10,10;UBERON:0000358,4.38e-10,10;UBERON:0000307,4.38e-10,10;UBERON:0000091,4.38e-10,10;UBERON:0000087,4.38e-10,10;UBERON:0007010,4.38e-10,10;UBERON:0007806,4.38e-10,10;UBERON:0008780,4.38e-10,10;UBERON:0005728,4.38e-10,10;UBERON:0001557,5.51e-09,19;UBERON:0000178,6.91e-07,15;UBERON:0000179,6.91e-07,15;UBERON:0000463,6.91e-07,15 | |||
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|short_description=p5@SNHG15 | |short_description=p5@SNHG15 | ||
}} | }} |
Latest revision as of 18:31, 18 September 2015
Short description: | p5@SNHG15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_SNHG15_5end |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | 400bp_to_uc003tmk.3_5end |
EntrezGene: | SNHG15 |
HGNC: | 27797 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD1a-positive Langerhans cell | 1.66e-22 | 2 |
immature CD1a-positive Langerhans cell | 1.66e-22 | 2 |
Langerhans cell | 5.74e-20 | 5 |
conventional dendritic cell | 2.34e-11 | 8 |
hematopoietic cell | 4.04e-11 | 177 |
dendritic cell | 2.18e-09 | 10 |
immature conventional dendritic cell | 4.04e-08 | 5 |
common dendritic progenitor | 4.04e-08 | 5 |
hematopoietic oligopotent progenitor cell | 1.38e-07 | 161 |
hematopoietic multipotent progenitor cell | 1.38e-07 | 161 |
hematopoietic stem cell | 3.40e-07 | 168 |
Ontology term | p-value | n |
---|---|---|
larynx | 1.07e-18 | 9 |
umbilical cord | 4.38e-10 | 10 |
blastocyst | 4.38e-10 | 10 |
blastula | 4.38e-10 | 10 |
bilaminar disc | 4.38e-10 | 10 |
inner cell mass | 4.38e-10 | 10 |
cleaving embryo | 4.38e-10 | 10 |
connecting stalk | 4.38e-10 | 10 |
inner cell mass derived epiblast | 4.38e-10 | 10 |
extraembryonic mesoderm | 4.38e-10 | 10 |
upper respiratory tract | 5.51e-09 | 19 |
blood | 6.91e-07 | 15 |
haemolymphatic fluid | 6.91e-07 | 15 |
organism substance | 6.91e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 2.88e-12 | 51 |
immune system cancer | 2.88e-12 | 51 |
acute myeloid leukemia | 2.93e-12 | 1 |
non-Hodgkin lymphoma | 3.27e-12 | 1 |
cutaneous T cell lymphoma | 3.27e-12 | 1 |
mycosis fungoides | 3.27e-12 | 1 |
lymphoma | 4.96e-10 | 10 |