FFCP PHASE1:Hg19::chr12:50616792..50616804,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51474 | |EntrezGene=51474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |HGNC=24636 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UHB6 | |UniProt=Q9UHB6 | ||
|association_with_transcript=-304bp_to_ENST00000552783,NM_001113547,uc001rwi.3_5end | |association_with_transcript=-304bp_to_ENST00000552783,NM_001113547,uc001rwi.3_5end | ||
|cluster_id=chr12:50616792..50616804,- | |||
|coexpression_cluster_id=C78 | |||
|description=CAGE_peak_29_at_LIMA1_5end | |description=CAGE_peak_29_at_LIMA1_5end | ||
|id=chr12:50616792..50616804,- | |id=chr12:50616792..50616804,- | ||
|ontology_enrichment_celltype=CL:0000945!6.41e-11!24;CL:0000826!6.41e-11!24;CL:0000453!1.20e-10!5;CL:0002568!4.01e-07!1;CL:0000864!4.78e-07!1;CL:0000091!4.78e-07!1 | |ontology_enrichment_celltype=CL:0000945!6.41e-11!24;CL:0000826!6.41e-11!24;CL:0000453!1.20e-10!5;CL:0002568!4.01e-07!1;CL:0000864!4.78e-07!1;CL:0000091!4.78e-07!1 | ||
|ontology_enrichment_celltype_v019=CL:0000945;1.03e-17;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,1.03e-17,24;CL:0000826,1.03e-17,24;CL:0000838,6.99e-09,52;CL:0000542,9.74e-09,53;CL:0000051,9.74e-09,53 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!3.18e-14!14;DOID:630!2.22e-07!1;DOID:0050177!2.22e-07!1;DOID:0050427!2.22e-07!1;DOID:120!4.33e-07!27;DOID:3571!4.78e-07!1;DOID:2355!5.37e-07!1 | |ontology_enrichment_disease=DOID:2394!3.18e-14!14;DOID:630!2.22e-07!1;DOID:0050177!2.22e-07!1;DOID:0050427!2.22e-07!1;DOID:120!4.33e-07!27;DOID:3571!4.78e-07!1;DOID:2355!5.37e-07!1 | ||
|ontology_enrichment_disease_v019=DOID:630;2.55e-98;1!DOID:0050177;2.55e-98;1!DOID:0050427;2.55e-98;1!DOID:0060058;2.73e-11;10 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.55e-98,1;DOID:0050177,2.55e-98,1;DOID:0050427,2.55e-98,1;DOID:0060058,2.73e-11,10 | |||
|ontology_enrichment_uberon=UBERON:0002118!4.37e-11!5;UBERON:0004532!4.37e-11!5;UBERON:0000992!7.64e-11!13;UBERON:0001154!6.38e-07!1;UBERON:0001153!6.38e-07!1;UBERON:0002372!7.15e-07!1;UBERON:0001961!7.15e-07!1;UBERON:0001744!7.15e-07!1;UBERON:0001735!7.15e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p29@LIMA1 | |short_description=p29@LIMA1 | ||
}} | }} |
Latest revision as of 18:31, 18 September 2015
Short description: | p29@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_29_at_LIMA1_5end |
Coexpression cluster: | C78_lymphoma_plasma_tonsil_appendix_lymph_seminal_trachea |
Association with transcript: | -304bp_to_ENST00000552783, NM_001113547, uc001rwi.3_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | Q9UHB6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 1.03e-17 | 24 |
pro-B cell | 1.03e-17 | 24 |
lymphoid lineage restricted progenitor cell | 6.99e-09 | 52 |
lymphocyte | 9.74e-09 | 53 |
common lymphoid progenitor | 9.74e-09 | 53 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.55e-98 | 1 |
monogenic disease | 2.55e-98 | 1 |
xeroderma pigmentosum | 2.55e-98 | 1 |
lymphoma | 2.73e-11 | 10 |