FFCP PHASE1:Hg19::chr12:50616368..50616378,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:50616368..50616378,-
|short_description=p4@LIMA1
|description=CAGE_peak_4_at_LIMA1_5end
|association_with_transcript=-100bp_to_uc001rwh.3_5end
|EntrezGen...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=51474 | |EntrezGene=51474 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24636 | |HGNC=24636 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-100bp_to_uc001rwh.3_5end | |||
|cluster_id=chr12:50616368..50616378,- | |||
|coexpression_cluster_id=C3288 | |||
|description=CAGE_peak_4_at_LIMA1_5end | |||
|id=chr12:50616368..50616378,- | |||
|ontology_enrichment_celltype=CL:0000055!3.53e-21!180;CL:0000057!9.01e-17!75;CL:0002620!5.30e-13!23;CL:0000220!3.75e-09!246;CL:0002321!8.93e-09!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.49e-17;23!CL:0000134;3.21e-07;55!CL:0000048;6.64e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002620,2.82e-17,23;CL:0000057,1.20e-14,76 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:17;8.85e-09;5!DOID:450;8.85e-09;5!DOID:66;8.85e-09;5!DOID:423;8.85e-09;5!DOID:0080000;8.85e-09;5!DOID:11722;8.85e-09;5 | |||
|ontology_enrichment_disease_v019_2=DOID:17,8.97e-09,5;DOID:450,8.97e-09,5;DOID:66,8.97e-09,5;DOID:423,8.97e-09,5;DOID:0080000,8.97e-09,5;DOID:11722,8.97e-09,5 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.89e-13!95;UBERON:0002097!7.18e-12!40;UBERON:0002199!1.47e-11!45;UBERON:0002416!1.47e-11!45;UBERON:0000914!1.73e-08!83;UBERON:0002329!1.73e-08!83;UBERON:0003077!1.73e-08!83;UBERON:0003059!1.73e-08!83;UBERON:0007282!1.73e-08!83;UBERON:0009618!1.73e-08!83;UBERON:0007285!1.73e-08!83 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;3.49e-11;41!UBERON:0002199;4.67e-11;46!UBERON:0002416;4.67e-11;46!UBERON:0003102;4.23e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,3.07e-15,99;UBERON:0002097,5.82e-15,41;UBERON:0002199,1.01e-14,46;UBERON:0002416,1.01e-14,46 | |||
|phase1_expression=1.2717486548939,0.428201047781966,1.55049844505568,0,0.893922188854576,3.48935409640147,0,0,1.56711376919903,0.245733936501509,0,0,0,1.11389717664042,0.994192127183747,0,0,0,1.46379839637152,0,0,0,0.286235987131057,0.136874425072884,0.753255837568817,0.0764134057479513,0,0,0,0,0.154816123316076,0,0.6024118375565,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222820913770347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.639312809217652,2.1686349143074,2.00535164254356,2.462390822334,3.1811437882044,0,0.283604451492204,0.221729397462564,0.351339142772504,0.130979075497713,0,0,0.324547393654683,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0.35576626268671,0,0,0,0,0.735326160691737,0,0.0892997282840798,0,0.337834441449967,0,0,0,0,0,0.436094052142534,0.496971951695318,2.27934920996244,9.79827938017819,4.58938593198102,1.06400514659507,0.560677600142307,0,0.74000264525148,0.311211035399766,0.404132016209064,0.326923806226917,0.302714855289863,0.576175924479999,0,2.18512053781224,0.570471821544449,1.19558944441441,0.117434498643765,0.323745888736263,0.421352420106746,0.816616685019573,0.122834317311768,1.03325781175765,3.56400857184616,1.48360157567134,0,0.718618141816238,0.673344455816265,0.250237039743928,0.277064115484183,6.14568669233173,0.919463387397059,3.30523729594513,0.680593098960126,9.50765069150968,5.76604949810132,6.14602513362729,5.40163972951924,8.65641245602887,9.53269998168828,3.53622027030021,6.58227695740938,5.06672426838233,6.05841058185875,6.07529331039176,3.07127507955743,6.74518225781567,3.22406714328449,1.3564847384839,4.05847791642923,4.90943017063502,3.44165514466805,0,0,0,0.10366105501537,0,0,0,1.92972281457866,0,1.85747171212792,0.721879481669586,0,0,0,0.330881918197182,0.871517776369625,0.237270619111097,0.134831308160164,0.392442930250692,0,0,0,0,0,0,0,0,0,0,0.514703430895577,2.30475599358114,0,1.50793458617446,0.833296006426766,0,0,0,0,1.17408694235822,0.144366447761074,0.462985512576611,0.570762456703795,0,0,0,0,0,2.81201501960331,2.51973192298289,3.1190521393325,2.05984602216551,2.03443756959773,0.383382679165211,0,0,0,0.144119953416961,0,0.126995788584338,0,1.17217447210047,0,0.308482478109971,0,0.857479297891735,0,0,0.2933531432838,2.45616259939778,0,0,2.6593811658487,1.04007436911366,0,0,0,1.00084595560703,0,0,0.977208552881205,0.355391948742546,0.791951872933429,7.53598442648965,6.97226766880235,3.499054691372,0,0,0,1.19812427745791,0,1.42636905040718,0.723906533337896,1.02738161275192,1.43248770591916,0,0,0,0.128343036279748,1.01637849688985,0,0.773288812777695,0.335032530668698,0.637938751653163,0,0,0,0.736148950314839,0.500170521059677,0.813795071099207,3.53550464602372,6.0665856191035,4.88877486605197,1.99140405487612,0.300946099727719,0,0,1.32845119707087,0.921845842708516,2.34585759063824,0,0,0,0,0,0,0,0,1.24053903909388,5.37116906508219,1.96462066103151,1.79394808957981,4.09365799253363,0.804269605718038,0,0.616838775210622,1.06537035187876,1.06765302817952,0.519254429183621,0.464841513839837,0,3.00759705454927,0.368323955743585,1.26295892981067,0.910455840033585,2.49136388422906,0,0,0,0,0,0,0.170093705276516,0.215915916102139,0,0,0,0.254876273045038,0,0,0,0,0,0,0.325378394664303,0.206082023295445,0,0,0,1.30012049207304,0,0.386682873168488,0.462145851343933,0.307007349452259,0.413509717453592,0.214840489736547,0.145016693914229,0.0852266274161009,1.78064071293475,1.98341898433174,1.53752053892085,3.70076866234294,0.6069466851333,0.929691098594572,4.40737285562896,0.6970372701606,2.15623506123262,0.532306030317022,0.869932992075073,0.37064843820784,1.43124886741991,1.116475108079,2.21465597303108,1.33441135746677,0.255897791311334,0.855877976067841,0.636406495851874,0,0.719489830333259,1.09814811894422,0.589062011728432,0.808729926293264,3.17020642346017,0.421258456238981,0,1.21856744815642,3.16950440270266,1.9109987597118,0.989838023675989,0,0.551365343546124,0,0.876901770507525,0,0,0.405820753925408,0.30982349809975,0,0.573645408816206,1.76848273823618,0,0,2.32218398827431,1.31717957183961,0,0,1.05844323998063,0,1.08890984861323,0.0941438007767792,0,0,0,4.82419140434615,0,0,0,0,0,0,0,0,0.106824071127473,0,0.980160863924127,0,0,0,0.159426272728822,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,3.12549761487054,0,0,0,0,0,0.667852230137435,0.16480387422676,0,0.597743964753209,0,0,0.613612095012929,0.123084805461069,1.86623752597084,0,0,0,0.197286811273867,0,1.11136990144637,0,0.0927680981618513,0,0,0,0,0.1137934482855,0,0,0,0,0.173624994933292,0,0,1.52581736317083,0,0,0,0,0.41827123283581,0.692552326534174,0.797594390929008,0,0,0.325942115766024,0.638002319463839,0.915975934018623,1.5991043280559,0,0,0,0,0,0,0,0,0.421996129056054,0.652931232636591,0,0.216388639742091,0.995261931078505,0.176915129006678,0,1.77912677208373,0.123563938946503,0.417687798021821,0.0674011329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| ||
|short_description=p4@LIMA1 | |||
}} | }} |
Latest revision as of 18:29, 18 September 2015
Short description: | p4@LIMA1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LIMA1_5end |
Coexpression cluster: | C3288_Fibroblast_Urothelial_Preadipocyte_mesothelioma_Mallassezderived_Mesothelial_alveolar |
Association with transcript: | -100bp_to_uc001rwh.3_5end |
EntrezGene: | LIMA1 |
HGNC: | 24636 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
skin fibroblast | 2.82e-17 | 23 |
fibroblast | 1.20e-14 | 76 |
Ontology term | p-value | n |
---|---|---|
surface structure | 3.07e-15 | 99 |
skin of body | 5.82e-15 | 41 |
integument | 1.01e-14 | 46 |
integumental system | 1.01e-14 | 46 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 8.97e-09 | 5 |
myotonic disease | 8.97e-09 | 5 |
muscle tissue disease | 8.97e-09 | 5 |
myopathy | 8.97e-09 | 5 |
muscular disease | 8.97e-09 | 5 |
myotonic dystrophy | 8.97e-09 | 5 |