FFCP PHASE1:Hg19::chr10:63809106..63809127,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84159 | |EntrezGene=84159 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17362 | |HGNC=17362 | ||
|TSSclassifier=strong | |||
|UniProt=Q14865 | |UniProt=Q14865 | ||
|association_with_transcript=136bp_to_ENST00000309334,NM_001244638,uc001jlu.1_5end | |association_with_transcript=136bp_to_ENST00000309334,NM_001244638,uc001jlu.1_5end | ||
|cluster_id=chr10:63809106..63809127,+ | |||
|coexpression_cluster_id=C1319 | |||
|description=CAGE_peak_1_at_ARID5B_5end | |description=CAGE_peak_1_at_ARID5B_5end | ||
|id=chr10:63809106..63809127,+ | |id=chr10:63809106..63809127,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.96e-17!180;CL:0000057!2.51e-13!75;CL:0002620!3.12e-08!23;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:0000187!3.62e-07!54 | |ontology_enrichment_celltype=CL:0000055!1.96e-17!180;CL:0000057!2.51e-13!75;CL:0002620!3.12e-08!23;CL:0000680!1.49e-07!57;CL:0000056!1.49e-07!57;CL:0000355!1.49e-07!57;CL:0000187!3.62e-07!54 | ||
|ontology_enrichment_celltype_v019=CL:0002620;3.11e-08;23!CL:0000134;2.28e-07;55 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,5.01e-14,76;CL:0002620,2.95e-08,23;CL:0000680,7.81e-08,58;CL:0000056,7.81e-08,58;CL:0000355,7.81e-08,58;CL:0000187,1.92e-07,55 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:2394!9.78e-08!14 | |ontology_enrichment_disease=DOID:2394!9.78e-08!14 | ||
|ontology_enrichment_disease_v019=DOID:2394;9.22e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,9.27e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.45e-10!115;UBERON:0000475!7.06e-10!365;UBERON:0000914!8.74e-10!83;UBERON:0002329!8.74e-10!83;UBERON:0003077!8.74e-10!83;UBERON:0003059!8.74e-10!83;UBERON:0007282!8.74e-10!83;UBERON:0009618!8.74e-10!83;UBERON:0007285!8.74e-10!83;UBERON:0002385!5.43e-09!63;UBERON:0001015!5.43e-09!63;UBERON:0000383!5.43e-09!63;UBERON:0004290!1.18e-08!70;UBERON:0001134!1.24e-08!61;UBERON:0002036!1.24e-08!61;UBERON:0003082!1.24e-08!61;UBERON:0005256!7.28e-07!143 | |ontology_enrichment_uberon=UBERON:0007023!1.45e-10!115;UBERON:0000475!7.06e-10!365;UBERON:0000914!8.74e-10!83;UBERON:0002329!8.74e-10!83;UBERON:0003077!8.74e-10!83;UBERON:0003059!8.74e-10!83;UBERON:0007282!8.74e-10!83;UBERON:0009618!8.74e-10!83;UBERON:0007285!8.74e-10!83;UBERON:0002385!5.43e-09!63;UBERON:0001015!5.43e-09!63;UBERON:0000383!5.43e-09!63;UBERON:0004290!1.18e-08!70;UBERON:0001134!1.24e-08!61;UBERON:0002036!1.24e-08!61;UBERON:0003082!1.24e-08!61;UBERON:0005256!7.28e-07!143 | ||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.77e-10,114;UBERON:0002385,2.76e-09,64;UBERON:0001015,2.76e-09,64;UBERON:0000383,2.76e-09,64;UBERON:0007524,3.18e-09,73;UBERON:0003077,5.68e-09,72;UBERON:0007285,5.68e-09,72;UBERON:0002329,6.12e-09,71;UBERON:0003059,6.12e-09,71;UBERON:0007282,6.12e-09,71;UBERON:0004290,6.12e-09,71;UBERON:0009618,6.12e-09,71;UBERON:0001134,6.32e-09,62;UBERON:0002036,6.32e-09,62;UBERON:0003082,6.32e-09,62;UBERON:0010314,1.34e-08,132;UBERON:0007503,5.93e-07,78;UBERON:0003104,6.25e-07,160;UBERON:0009142,6.25e-07,160 | |||
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| ||
|short_description=p1@ARID5B | |short_description=p1@ARID5B | ||
}} | }} |
Latest revision as of 18:29, 18 September 2015
Short description: | p1@ARID5B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ARID5B_5end |
Coexpression cluster: | C1319_skeletal_mesodermal_sacrococcigeal_mature_astrocytoma_lung_adipose |
Association with transcript: | 136bp_to_ENST00000309334, NM_001244638, uc001jlu.1_5end |
EntrezGene: | ARID5B |
HGNC: | 17362 |
UniProt: | Q14865 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 5.01e-14 | 76 |
skin fibroblast | 2.95e-08 | 23 |
muscle precursor cell | 7.81e-08 | 58 |
myoblast | 7.81e-08 | 58 |
multi-potent skeletal muscle stem cell | 7.81e-08 | 58 |
muscle cell | 1.92e-07 | 55 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.77e-10 | 114 |
muscle tissue | 2.76e-09 | 64 |
musculature | 2.76e-09 | 64 |
musculature of body | 2.76e-09 | 64 |
dense mesenchyme tissue | 3.18e-09 | 73 |
paraxial mesoderm | 5.68e-09 | 72 |
presumptive paraxial mesoderm | 5.68e-09 | 72 |
somite | 6.12e-09 | 71 |
presomitic mesoderm | 6.12e-09 | 71 |
presumptive segmental plate | 6.12e-09 | 71 |
dermomyotome | 6.12e-09 | 71 |
trunk paraxial mesoderm | 6.12e-09 | 71 |
skeletal muscle tissue | 6.32e-09 | 62 |
striated muscle tissue | 6.32e-09 | 62 |
myotome | 6.32e-09 | 62 |
structure with developmental contribution from neural crest | 1.34e-08 | 132 |
epithelial vesicle | 5.93e-07 | 78 |
mesenchyme | 6.25e-07 | 160 |
entire embryonic mesenchyme | 6.25e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 9.27e-08 | 14 |