FFCP PHASE1:Hg19::chr6:41303336..41303361,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:41303336..41303361,+
|short_description=p1@NCR2
|description=CAGE_peak_1_at_NCR2_5end
|association_with_transcript=-31bp_to_ENST00000373083_5end
|EntrezGe...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9436 | |EntrezGene=9436 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6732 | |HGNC=6732 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-31bp_to_ENST00000373083_5end | |||
|cluster_id=chr6:41303336..41303361,+ | |||
|coexpression_cluster_id=C156 | |||
|description=CAGE_peak_1_at_NCR2_5end | |||
|id=chr6:41303336..41303361,+ | |||
|ontology_enrichment_celltype=CL:0000784!1.76e-18!3;CL:0000838!8.42e-14!52;CL:0000542!1.70e-13!53;CL:0000051!1.70e-13!53;CL:0000945!4.31e-11!24;CL:0000826!4.31e-11!24;CL:0000451!1.18e-08!10;CL:0000738!2.66e-08!140;CL:0000037!3.90e-08!172;CL:0000566!3.90e-08!172;CL:0000946!1.46e-07!1;CL:0000786!1.46e-07!1;CL:0000980!1.46e-07!1;CL:0002127!1.65e-07!1;CL:0000914!1.65e-07!1;CL:0000911!1.65e-07!1;CL:0000814!1.65e-07!1;CL:0002042!1.65e-07!1;CL:0002039!1.65e-07!1;CL:0002040!1.65e-07!1;CL:0002041!1.65e-07!1;CL:0000988!1.77e-07!182 | |||
|ontology_enrichment_celltype_v019=CL:0000946;7.48e-30;1!CL:0000786;7.48e-30;1!CL:0002127;1.33e-29;1!CL:0000911;1.33e-29;1!CL:0000814;1.33e-29;1!CL:0000945;2.52e-11;24!CL:0000542;9.77e-09;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000946,7.48e-30,1;CL:0000786,7.48e-30,1;CL:0000980,7.48e-30,1;CL:0002127,1.33e-29,1;CL:0000914,1.33e-29,1;CL:0000911,1.33e-29,1;CL:0000814,1.33e-29,1;CL:0002042,1.33e-29,1;CL:0002039,1.33e-29,1;CL:0002040,1.33e-29,1;CL:0002041,1.33e-29,1;CL:0000785,1.15e-15,2;CL:0000955,1.15e-15,2;CL:0000818,1.15e-15,2;CL:0000954,1.15e-15,2;CL:0000816,1.15e-15,2;CL:0000893,1.54e-15,2;CL:0002489,1.54e-15,2;CL:0000809,1.54e-15,2;CL:0000808,1.54e-15,2;CL:0000894,1.54e-15,2;CL:0000806,1.54e-15,2;CL:0000807,1.54e-15,2;CL:0000805,1.54e-15,2;CL:0002425,1.54e-15,2;CL:0000838,6.34e-14,52;CL:0000542,1.14e-13,53;CL:0000051,1.14e-13,53;CL:0000945,2.43e-11,24;CL:0000826,2.43e-11,24;CL:0000817,6.73e-11,3;CL:0002032,9.40e-09,161;CL:0000837,9.40e-09,161;CL:0000037,2.15e-08,168;CL:0000988,5.65e-08,177 | |||
|ontology_enrichment_development_v019=CL:0000954;1.15e-15;2!CL:0002425;1.54e-15;2!CL:0000051;9.77e-09;53 | |||
|ontology_enrichment_disease=DOID:2531!6.27e-08!51;DOID:0060083!6.27e-08!51;DOID:630!1.86e-07!1;DOID:0050177!1.86e-07!1;DOID:0050427!1.86e-07!1;DOID:2355!4.85e-07!1 | |||
|ontology_enrichment_disease_v019=DOID:630;3.16e-29;1!DOID:0050177;3.16e-29;1!DOID:0050427;3.16e-29;1!DOID:2531;3.09e-11;51!DOID:0060083;3.09e-11;51!DOID:1240;2.02e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:630,2.37e-29,1;DOID:0050177,2.37e-29,1;DOID:0050427,2.37e-29,1;DOID:2531,3.44e-14,51;DOID:0060083,3.44e-14,51;DOID:1240,4.07e-12,39 | |||
|ontology_enrichment_uberon=UBERON:0004177!3.44e-20!7;UBERON:0001042!5.63e-14!10;UBERON:0009145!5.63e-14!10;UBERON:0002370!1.88e-13!4;UBERON:0005058!1.88e-13!4;UBERON:0009113!1.88e-13!4;UBERON:0003295!1.88e-13!4;UBERON:0005562!1.88e-13!4;UBERON:0006562!1.09e-12!11;UBERON:0003351!3.92e-09!6;UBERON:0002106!1.62e-08!3;UBERON:0004854!1.62e-08!3;UBERON:0009034!1.62e-08!3;UBERON:0002095!1.62e-08!3;UBERON:0004782!1.62e-08!3;UBERON:0003281!1.62e-08!3;UBERON:0009664!1.62e-08!3;UBERON:0002296!1.62e-08!3;UBERON:0005602!1.62e-08!3;UBERON:0001179!1.62e-08!3;UBERON:0006293!1.62e-08!3;UBERON:0001557!2.98e-07!19;UBERON:0001154!4.31e-07!1;UBERON:0001153!4.31e-07!1;UBERON:0005409!5.65e-07!35;UBERON:0002372!8.18e-07!1;UBERON:0001961!8.18e-07!1;UBERON:0001744!8.18e-07!1;UBERON:0001735!8.18e-07!1 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,1.96e-08,4;UBERON:0005058,1.96e-08,4;UBERON:0009113,1.96e-08,4;UBERON:0003295,1.96e-08,4;UBERON:0005562,1.96e-08,4 | |||
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|short_description=p1@NCR2 | |||
}} | }} |
Latest revision as of 18:28, 18 September 2015
Short description: | p1@NCR2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_NCR2_5end |
Coexpression cluster: | C156_plasma_splenic_hereditary_B_large_xeroderma_b |
Association with transcript: | -31bp_to_ENST00000373083_5end |
EntrezGene: | NCR2 |
HGNC: | 6732 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 1.96e-08 | 4 |
hemolymphoid system gland | 1.96e-08 | 4 |
thymic region | 1.96e-08 | 4 |
pharyngeal gland | 1.96e-08 | 4 |
thymus primordium | 1.96e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 2.37e-29 | 1 |
monogenic disease | 2.37e-29 | 1 |
xeroderma pigmentosum | 2.37e-29 | 1 |
hematologic cancer | 3.44e-14 | 51 |
immune system cancer | 3.44e-14 | 51 |
leukemia | 4.07e-12 | 39 |