FFCP PHASE1:Hg19::chr1:61553440..61553451,+: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4774 | |EntrezGene=4774 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=7784 | |HGNC=7784 | ||
|TSSclassifier=strong | |||
|UniProt=Q12857 | |UniProt=Q12857 | ||
|association_with_transcript=-395bp_to_U07809_5end | |||
|cluster_id=chr1:61553440..61553451,+ | |||
|coexpression_cluster_id=C11 | |||
|description=CAGE_peak_51_at_NFIA_5end | |||
|id=chr1:61553440..61553451,+ | |||
|ontology_enrichment_celltype=CL:0002605!5.44e-08!3 | |||
|ontology_enrichment_celltype_v019=CL:0000123;5.96e-34;2!CL:0000242;5.96e-34;2!CL:0000312;1.71e-14;5!CL:0000240;2.59e-12;6!CL:0000311;2.59e-12;6!CL:0000079;2.59e-12;6!CL:0000237;2.59e-12;6!CL:0000362;1.16e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.04e-34,2;CL:0000312,1.60e-14,5;CL:0000240,2.45e-12,6;CL:0000311,2.45e-12,6;CL:0000079,2.45e-12,6;CL:0000237,2.45e-12,6;CL:0000036,2.45e-12,6;CL:0000357,2.45e-12,6;CL:0000114,2.45e-12,6;CL:0000362,1.12e-08,9 | |||
|ontology_enrichment_development_v019=UBERON:0006215;7.79e-88;3!CL:0000357;2.59e-12;6!CL:0000114;2.59e-12;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!7.38e-20!57;UBERON:0005068!7.38e-20!57;UBERON:0006241!7.38e-20!57;UBERON:0007135!7.38e-20!57;UBERON:0007023!2.66e-17!115;UBERON:0002616!1.28e-16!59;UBERON:0001017!1.48e-16!82;UBERON:0005743!1.26e-15!86;UBERON:0000073!1.50e-15!94;UBERON:0001016!1.50e-15!94;UBERON:0000956!1.08e-14!25;UBERON:0000203!1.08e-14!25;UBERON:0001869!6.46e-14!32;UBERON:0000955!1.51e-13!69;UBERON:0006238!1.51e-13!69;UBERON:0002791!1.87e-13!33;UBERON:0002020!5.09e-13!34;UBERON:0003528!5.09e-13!34;UBERON:0001893!5.09e-13!34;UBERON:0002780!6.03e-13!41;UBERON:0001890!6.03e-13!41;UBERON:0006240!6.03e-13!41;UBERON:0003080!1.35e-12!42;UBERON:0003075!4.31e-12!86;UBERON:0007284!4.31e-12!86;UBERON:0002346!2.07e-11!90;UBERON:0004121!3.22e-10!169;UBERON:0002619!3.45e-10!22;UBERON:0000924!7.04e-10!173;UBERON:0006601!7.04e-10!173;UBERON:0000153!3.66e-09!129;UBERON:0007811!3.66e-09!129;UBERON:0003076!6.13e-09!15;UBERON:0003057!6.13e-09!15;UBERON:0001950!2.30e-08!20;UBERON:0003056!4.12e-08!61;UBERON:0001896!4.72e-08!3;UBERON:0005290!4.72e-08!3;UBERON:0010096!4.72e-08!3;UBERON:0002771!4.89e-08!3;UBERON:0004733!1.58e-07!12;UBERON:0002028!1.58e-07!12;UBERON:0007277!1.58e-07!12;UBERON:0000033!1.93e-07!123;UBERON:0004732!5.95e-07!13;UBERON:0001736!6.43e-07!1;UBERON:0006298!6.43e-07!1 | |||
|ontology_enrichment_uberon_v019=UBERON:0002037;1.09e-44;6!UBERON:0002680;2.87e-30;9!UBERON:0001895;2.87e-30;9!UBERON:0004733;4.86e-23;12!UBERON:0002028;4.86e-23;12!UBERON:0004732;2.28e-21;13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002037,1.22e-44,6;UBERON:0006215,1.22e-44,6;UBERON:0002680,3.09e-30,9;UBERON:0001895,3.09e-30,9;UBERON:0010092,3.09e-30,9;UBERON:0004733,5.14e-23,12;UBERON:0002028,5.14e-23,12;UBERON:0007277,5.14e-23,12;UBERON:0004732,2.40e-21,13;UBERON:0003076,1.13e-18,15;UBERON:0003057,1.13e-18,15 | |||
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|short_description=p51@NFIA | |||
}} | }} |
Latest revision as of 18:22, 18 September 2015
Short description: | p51@NFIA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_51_at_NFIA_5end |
Coexpression cluster: | C11_cerebellum_medulla_pons_parietal_occipital_middle_medial |
Association with transcript: | -395bp_to_U07809_5end |
EntrezGene: | NFIA |
HGNC: | 7784 |
UniProt: | Q12857 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.04e-34 | 2 |
keratinocyte | 1.60e-14 | 5 |
stratified squamous epithelial cell | 2.45e-12 | 6 |
keratin accumulating cell | 2.45e-12 | 6 |
stratified epithelial cell | 2.45e-12 | 6 |
keratinizing barrier epithelial cell | 2.45e-12 | 6 |
epithelial fate stem cell | 2.45e-12 | 6 |
stratified epithelial stem cell | 2.45e-12 | 6 |
surface ectodermal cell | 2.45e-12 | 6 |
epidermal cell | 1.12e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
cerebellum | 1.22e-44 | 6 |
rhombic lip | 1.22e-44 | 6 |
regional part of metencephalon | 3.09e-30 | 9 |
metencephalon | 3.09e-30 | 9 |
future metencephalon | 3.09e-30 | 9 |
segmental subdivision of hindbrain | 5.14e-23 | 12 |
hindbrain | 5.14e-23 | 12 |
presumptive hindbrain | 5.14e-23 | 12 |
segmental subdivision of nervous system | 2.40e-21 | 13 |
posterior neural tube | 1.13e-18 | 15 |
chordal neural plate | 1.13e-18 | 15 |