FFCP PHASE1:Hg19::chr17:15164070..15164148,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5376 | |EntrezGene=5376 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9118 | |HGNC=9118 | ||
|TSSclassifier=strong | |||
|UniProt=Q01453,Q6FH25 | |UniProt=Q01453,Q6FH25 | ||
|association_with_transcript=0bp_to_NM_153322,uc002goj.2_5end | |association_with_transcript=0bp_to_NM_153322,uc002goj.2_5end | ||
|cluster_id=chr17:15164070..15164148,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_3_at_PMP22_5end | |description=CAGE_peak_3_at_PMP22_5end | ||
|id=chr17:15164070..15164148,- | |id=chr17:15164070..15164148,- | ||
|ontology_enrichment_celltype=CL:0000115!9.70e-10!35;CL:0002139!1.96e-08!24;CL:0002078!1.24e-07!44;CL:0000213!2.84e-07!57;CL:0000215!2.84e-07!57 | |ontology_enrichment_celltype=CL:0000115!9.70e-10!35;CL:0002139!1.96e-08!24;CL:0002078!1.24e-07!44;CL:0000213!2.84e-07!57;CL:0000215!2.84e-07!57 | ||
|ontology_enrichment_celltype_v019=CL:0000115;6.13e-09;36!CL:0002139;1.60e-08;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000115,3.51e-10,36;CL:0002139,1.87e-08,24;CL:0002078,5.09e-08,45;CL:0000213,1.26e-07,58;CL:0000215,1.26e-07,58 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005743!9.31e-25!86;UBERON:0001017!3.31e-23!82;UBERON:0000073!1.95e-22!94;UBERON:0001016!1.95e-22!94;UBERON:0000955!1.78e-21!69;UBERON:0006238!1.78e-21!69;UBERON:0001049!1.06e-20!57;UBERON:0005068!1.06e-20!57;UBERON:0006241!1.06e-20!57;UBERON:0007135!1.06e-20!57;UBERON:0003075!1.73e-20!86;UBERON:0007284!1.73e-20!86;UBERON:0002616!9.92e-20!59;UBERON:0002346!1.02e-18!90;UBERON:0001893!1.61e-15!34;UBERON:0002020!1.78e-15!34;UBERON:0003528!1.78e-15!34;UBERON:0000477!2.84e-15!286;UBERON:0000025!3.33e-15!194;UBERON:0002780!3.76e-15!41;UBERON:0001890!3.76e-15!41;UBERON:0006240!3.76e-15!41;UBERON:0003080!4.28e-15!42;UBERON:0002791!6.22e-15!33;UBERON:0000033!1.13e-14!123;UBERON:0001869!3.31e-14!32;UBERON:0003056!4.49e-14!61;UBERON:0000468!6.05e-14!659;UBERON:0000153!1.66e-13!129;UBERON:0007811!1.66e-13!129;UBERON:0004111!3.58e-13!241;UBERON:0000467!1.09e-12!625;UBERON:0007023!1.43e-12!115;UBERON:0000480!2.32e-12!626;UBERON:0002050!4.04e-11!605;UBERON:0005423!4.04e-11!605;UBERON:0000923!7.48e-11!604;UBERON:0005291!7.48e-11!604;UBERON:0006598!7.48e-11!604;UBERON:0002532!7.48e-11!604;UBERON:0004121!1.02e-10!169;UBERON:0000922!1.04e-10!612;UBERON:0000956!2.01e-10!25;UBERON:0000203!2.01e-10!25;UBERON:0000119!2.18e-10!312;UBERON:0000924!5.26e-10!173;UBERON:0006601!5.26e-10!173;UBERON:0000475!6.50e-10!365;UBERON:0000483!6.90e-10!309;UBERON:0000062!1.26e-09!511;UBERON:0002619!3.52e-09!22;UBERON:0001950!3.44e-08!20;UBERON:0002049!6.80e-08!79;UBERON:0007798!6.80e-08!79;UBERON:0003076!7.09e-07!15;UBERON:0003057!7.09e-07!15;UBERON:0002308!9.59e-07!9;UBERON:0000125!9.59e-07!9 | |ontology_enrichment_uberon=UBERON:0005743!9.31e-25!86;UBERON:0001017!3.31e-23!82;UBERON:0000073!1.95e-22!94;UBERON:0001016!1.95e-22!94;UBERON:0000955!1.78e-21!69;UBERON:0006238!1.78e-21!69;UBERON:0001049!1.06e-20!57;UBERON:0005068!1.06e-20!57;UBERON:0006241!1.06e-20!57;UBERON:0007135!1.06e-20!57;UBERON:0003075!1.73e-20!86;UBERON:0007284!1.73e-20!86;UBERON:0002616!9.92e-20!59;UBERON:0002346!1.02e-18!90;UBERON:0001893!1.61e-15!34;UBERON:0002020!1.78e-15!34;UBERON:0003528!1.78e-15!34;UBERON:0000477!2.84e-15!286;UBERON:0000025!3.33e-15!194;UBERON:0002780!3.76e-15!41;UBERON:0001890!3.76e-15!41;UBERON:0006240!3.76e-15!41;UBERON:0003080!4.28e-15!42;UBERON:0002791!6.22e-15!33;UBERON:0000033!1.13e-14!123;UBERON:0001869!3.31e-14!32;UBERON:0003056!4.49e-14!61;UBERON:0000468!6.05e-14!659;UBERON:0000153!1.66e-13!129;UBERON:0007811!1.66e-13!129;UBERON:0004111!3.58e-13!241;UBERON:0000467!1.09e-12!625;UBERON:0007023!1.43e-12!115;UBERON:0000480!2.32e-12!626;UBERON:0002050!4.04e-11!605;UBERON:0005423!4.04e-11!605;UBERON:0000923!7.48e-11!604;UBERON:0005291!7.48e-11!604;UBERON:0006598!7.48e-11!604;UBERON:0002532!7.48e-11!604;UBERON:0004121!1.02e-10!169;UBERON:0000922!1.04e-10!612;UBERON:0000956!2.01e-10!25;UBERON:0000203!2.01e-10!25;UBERON:0000119!2.18e-10!312;UBERON:0000924!5.26e-10!173;UBERON:0006601!5.26e-10!173;UBERON:0000475!6.50e-10!365;UBERON:0000483!6.90e-10!309;UBERON:0000062!1.26e-09!511;UBERON:0002619!3.52e-09!22;UBERON:0001950!3.44e-08!20;UBERON:0002049!6.80e-08!79;UBERON:0007798!6.80e-08!79;UBERON:0003076!7.09e-07!15;UBERON:0003057!7.09e-07!15;UBERON:0002308!9.59e-07!9;UBERON:0000125!9.59e-07!9 | ||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.04e-13;34!UBERON:0003528;2.51e-13;34!UBERON:0002020;2.51e-13;34!UBERON:0002791;5.05e-13;32!UBERON:0001869;5.59e-13;32!UBERON:0002780;3.33e-11;41!UBERON:0001890;3.33e-11;41!UBERON:0001017;3.40e-11;75!UBERON:0000073;4.91e-11;53!UBERON:0002616;4.91e-11;53!UBERON:0000956;1.89e-10;25!UBERON:0000203;1.89e-10;25!UBERON:0000955;1.49e-09;68!UBERON:0002619;3.35e-09;22!UBERON:0001016;2.27e-08;83!UBERON:0001950;3.30e-08;20!UBERON:0000125;9.13e-07;9!UBERON:0002308;9.13e-07;9 | |||
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| ||
|short_description=p3@PMP22 | |short_description=p3@PMP22 | ||
}} | }} |
Latest revision as of 18:16, 18 September 2015
Short description: | p3@PMP22 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PMP22_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 0bp_to_NM_153322, uc002goj.2_5end |
EntrezGene: | PMP22 |
HGNC: | 9118 |
UniProt: | Q01453Q6FH25 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell | 3.51e-10 | 36 |
endothelial cell of vascular tree | 1.87e-08 | 24 |
meso-epithelial cell | 5.09e-08 | 45 |
lining cell | 1.26e-07 | 58 |
barrier cell | 1.26e-07 | 58 |