FFCP PHASE2:Hg19::chr6:41130847..41130867,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:54209 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17761 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=54209 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17761 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q9NZC2 | ||
|association_with_transcript=46bp_to_ENST00000373113_5end | |association_with_transcript=46bp_to_ENST00000373113_5end | ||
|cluster_id=chr6:41130847..41130867,- | |cluster_id=chr6:41130847..41130867,- |
Latest revision as of 18:16, 18 September 2015
Short description: | p1@TREM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TREM2_5end |
Coexpression cluster: | C54_Dendritic_Macrophage_Monocytederived_CD14_leiomyoma_adipose_immature |
Association with transcript: | 46bp_to_ENST00000373113_5end |
EntrezGene: | TREM2 |
HGNC: | 17761 |
UniProt: | Q9NZC2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p1@TREM2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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macrophage | 3.04e-11 | 6 |
respiratory epithelial cell | 3.86e-11 | 13 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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neural tube | 8.55e-45 | 56 |
neural rod | 8.55e-45 | 56 |
future spinal cord | 8.55e-45 | 56 |
neural keel | 8.55e-45 | 56 |
regional part of nervous system | 1.17e-40 | 53 |
regional part of brain | 1.17e-40 | 53 |
adult organism | 4.69e-37 | 114 |
central nervous system | 6.30e-37 | 81 |
ecto-epithelium | 1.52e-35 | 104 |
brain | 3.49e-33 | 68 |
Showing 1 to 10 of 67 entries