FFCP PHASE1:Hg19::chr15:68115921..68115938,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr15:68115921..68115938,+
|short_description=p2@SKOR1
|description=CAGE_peak_2_at_SKOR1_5end
|association_with_transcript=26bp_to_ENST00000554240_5end
|Entrez...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=390598 | |EntrezGene=390598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=21326 | |HGNC=21326 | ||
|TSSclassifier=strong | |||
|UniProt=G3V3E1 | |UniProt=G3V3E1 | ||
|association_with_transcript=26bp_to_ENST00000554240_5end | |||
|cluster_id=chr15:68115921..68115938,+ | |||
|description=CAGE_peak_2_at_SKOR1_5end | |||
|id=chr15:68115921..68115938,+ | |||
|ontology_enrichment_celltype=CL:0000242!1.47e-08!2;CL:0000785!8.43e-08!2;CL:0000955!8.43e-08!2;CL:0000818!8.43e-08!2;CL:0000954!8.43e-08!2;CL:0000816!8.43e-08!2 | |||
|ontology_enrichment_celltype_v019=CL:0000123;7.33e-32;2!CL:0000242;7.33e-32;2!CL:0000785;5.53e-17;1!CL:0000819;5.53e-17;1!CL:0000312;2.23e-13;5!CL:0000240;2.62e-11;6!CL:0000311;2.62e-11;6!CL:0000079;2.62e-11;6!CL:0000237;2.62e-11;6!CL:0000362;7.76e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,7.33e-32,2;CL:0000819,5.53e-17,1;CL:0000312,2.23e-13,5;CL:0000240,2.62e-11,6;CL:0000311,2.62e-11,6;CL:0000079,2.62e-11,6;CL:0000237,2.62e-11,6;CL:0000036,2.62e-11,6;CL:0000357,2.62e-11,6;CL:0000114,2.62e-11,6;CL:0000785,3.71e-09,2;CL:0000955,3.71e-09,2;CL:0000818,3.71e-09,2;CL:0000954,3.71e-09,2;CL:0000816,3.71e-09,2;CL:0000362,7.77e-08,9 | |||
|ontology_enrichment_development_v019=CL:0000357;2.62e-11;6!CL:0000114;2.62e-11;6!CL:0000954;3.71e-09;2 | |||
|ontology_enrichment_disease=DOID:154!4.87e-08!2;DOID:4236!4.87e-08!2 | |||
|ontology_enrichment_disease_v019=DOID:3119;1.16e-17;14!DOID:0060073;5.53e-17;1!DOID:8675;5.53e-17;1!DOID:1115;1.34e-12;20!DOID:154;7.49e-09;2!DOID:4236;7.49e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3119,1.13e-17,14;DOID:0060073,5.53e-17,1;DOID:8675,5.53e-17,1;DOID:1115,1.36e-12,20;DOID:154,8.74e-09,2;DOID:4236,8.74e-09,2;DOID:0050687,7.39e-08,143;DOID:162,8.89e-07,235 | |||
|ontology_enrichment_uberon=UBERON:0003076!9.87e-26!15;UBERON:0003057!9.87e-26!15;UBERON:0004733!4.28e-17!12;UBERON:0002028!4.28e-17!12;UBERON:0007277!4.28e-17!12;UBERON:0004732!1.14e-15!13;UBERON:0002298!1.17e-14!8;UBERON:0001049!3.39e-14!57;UBERON:0005068!3.39e-14!57;UBERON:0006241!3.39e-14!57;UBERON:0007135!3.39e-14!57;UBERON:0001017!1.61e-13!82;UBERON:0005743!1.16e-12!86;UBERON:0000073!3.21e-12!94;UBERON:0001016!3.21e-12!94;UBERON:0003075!1.36e-11!86;UBERON:0007284!1.36e-11!86;UBERON:0002240!2.34e-11!3;UBERON:0001896!4.97e-11!3;UBERON:0005290!4.97e-11!3;UBERON:0010096!4.97e-11!3;UBERON:0002346!7.31e-11!90;UBERON:0000988!1.83e-10!3;UBERON:0002680!2.52e-09!9;UBERON:0001895!2.52e-09!9;UBERON:0010092!2.52e-09!9;UBERON:0000955!2.53e-09!69;UBERON:0006238!2.53e-09!69;UBERON:0002616!7.07e-09!59;UBERON:0002148!1.31e-07!2;UBERON:0009662!1.31e-07!2;UBERON:0007023!1.79e-07!115;UBERON:0004121!2.08e-07!169;UBERON:0002360!2.80e-07!2;UBERON:0000094!2.80e-07!2;UBERON:0007645!2.80e-07!2;UBERON:0000924!4.19e-07!173;UBERON:0006601!4.19e-07!173;UBERON:0005174!5.86e-07!5;UBERON:0001137!5.86e-07!5 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p2@SKOR1 | |||
}} | }} |
Latest revision as of 17:56, 18 September 2015
Short description: | p2@SKOR1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SKOR1_5end |
Coexpression cluster: | NA |
Association with transcript: | 26bp_to_ENST00000554240_5end |
EntrezGene: | SKOR1 |
HGNC: | 21326 |
UniProt: | G3V3E1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 7.33e-32 | 2 |
B-1 B cell | 5.53e-17 | 1 |
keratinocyte | 2.23e-13 | 5 |
stratified squamous epithelial cell | 2.62e-11 | 6 |
keratin accumulating cell | 2.62e-11 | 6 |
stratified epithelial cell | 2.62e-11 | 6 |
keratinizing barrier epithelial cell | 2.62e-11 | 6 |
epithelial fate stem cell | 2.62e-11 | 6 |
stratified epithelial stem cell | 2.62e-11 | 6 |
surface ectodermal cell | 2.62e-11 | 6 |
mature B cell | 3.71e-09 | 2 |
pre-B-II cell | 3.71e-09 | 2 |
transitional stage B cell | 3.71e-09 | 2 |
small pre-B-II cell | 3.71e-09 | 2 |
immature B cell | 3.71e-09 | 2 |
epidermal cell | 7.77e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
gastrointestinal system cancer | 1.13e-17 | 14 |
lymphatic system cancer | 5.53e-17 | 1 |
lymphosarcoma | 5.53e-17 | 1 |
sarcoma | 1.36e-12 | 20 |
mixed cell type cancer | 8.74e-09 | 2 |
carcinosarcoma | 8.74e-09 | 2 |
cell type cancer | 7.39e-08 | 143 |
cancer | 8.89e-07 | 235 |