FFCP PHASE1:Hg19::chr7:44788430..44788471,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr7:44788430..44788471,+ to FFCP PHASE1:Hg19::chr7:44788430..44788471,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83637 | |EntrezGene=83637 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22229 | |HGNC=22229 | ||
|TSSclassifier=strong | |||
|UniProt=C9JDA5 | |UniProt=C9JDA5 | ||
|association_with_transcript=0bp_to_ENST00000457123_5end | |||
|cluster_id=chr7:44788430..44788471,+ | |||
|description=CAGE_peak_1_at_ZMIZ2_5end | |||
|id=chr7:44788430..44788471,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001893!9.65e-16!34;UBERON:0001049!1.46e-15!57;UBERON:0005068!1.46e-15!57;UBERON:0006241!1.46e-15!57;UBERON:0007135!1.46e-15!57;UBERON:0001869!1.98e-15!32;UBERON:0001017!2.12e-15!82;UBERON:0002791!3.57e-15!33;UBERON:0002780!3.62e-15!41;UBERON:0001890!3.62e-15!41;UBERON:0006240!3.62e-15!41;UBERON:0002020!3.81e-15!34;UBERON:0003528!3.81e-15!34;UBERON:0003080!1.02e-14!42;UBERON:0005743!1.17e-14!86;UBERON:0000073!6.52e-14!94;UBERON:0001016!6.52e-14!94;UBERON:0002619!1.05e-13!22;UBERON:0000955!6.31e-13!69;UBERON:0006238!6.31e-13!69;UBERON:0000956!8.80e-13!25;UBERON:0000203!8.80e-13!25;UBERON:0001950!1.16e-12!20;UBERON:0002616!7.26e-12!59;UBERON:0000025!1.45e-11!194;UBERON:0003075!1.52e-11!86;UBERON:0007284!1.52e-11!86;UBERON:0002346!3.30e-11!90;UBERON:0003056!3.98e-11!61;UBERON:0004111!2.72e-08!241;UBERON:0007023!4.67e-07!115;UBERON:0000477!8.01e-07!286 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;5.16e-14;32!UBERON:0002619;9.78e-14;22!UBERON:0001893;1.19e-13;34!UBERON:0002791;1.56e-13;32!UBERON:0003528;2.92e-13;34!UBERON:0002020;2.92e-13;34!UBERON:0000956;8.42e-13;25!UBERON:0000203;8.42e-13;25!UBERON:0001950;1.10e-12;20!UBERON:0002780;2.12e-11;41!UBERON:0001890;2.12e-11;41!UBERON:0000073;2.53e-09;53!UBERON:0002616;2.53e-09;53!UBERON:0000955;8.76e-07;68 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,6.33e-16,56;UBERON:0005068,6.33e-16,56;UBERON:0006241,6.33e-16,56;UBERON:0007135,6.33e-16,56;UBERON:0001893,9.65e-16,34;UBERON:0001017,1.16e-15,81;UBERON:0000073,1.52e-15,53;UBERON:0002616,1.52e-15,53;UBERON:0001869,1.98e-15,32;UBERON:0002780,3.62e-15,41;UBERON:0001890,3.62e-15,41;UBERON:0003080,3.62e-15,41;UBERON:0006240,3.62e-15,41;UBERON:0003528,3.81e-15,34;UBERON:0002020,3.81e-15,34;UBERON:0002791,7.86e-15,32;UBERON:0001016,8.83e-15,89;UBERON:0002619,1.05e-13,22;UBERON:0000955,3.47e-13,68;UBERON:0006238,3.47e-13,68;UBERON:0000956,8.80e-13,25;UBERON:0000203,8.80e-13,25;UBERON:0001950,1.16e-12,20;UBERON:0000025,4.34e-12,192;UBERON:0003056,9.38e-12,61;UBERON:0003075,1.22e-11,82;UBERON:0007284,1.22e-11,82;UBERON:0002346,2.81e-11,86;UBERON:0004111,1.73e-08,240;UBERON:0010371,1.97e-07,104;UBERON:0007023,9.07e-07,114 | |||
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| ||
|short_description=p1@ZMIZ2 | |||
}} | }} |
Latest revision as of 17:53, 18 September 2015
Short description: | p1@ZMIZ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMIZ2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000457123_5end |
EntrezGene: | ZMIZ2 |
HGNC: | 22229 |
UniProt: | C9JDA5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural tube | 6.33e-16 | 56 |
neural rod | 6.33e-16 | 56 |
future spinal cord | 6.33e-16 | 56 |
neural keel | 6.33e-16 | 56 |
telencephalon | 9.65e-16 | 34 |
central nervous system | 1.16e-15 | 81 |
regional part of nervous system | 1.52e-15 | 53 |
regional part of brain | 1.52e-15 | 53 |
cerebral hemisphere | 1.98e-15 | 32 |
regional part of forebrain | 3.62e-15 | 41 |
forebrain | 3.62e-15 | 41 |
anterior neural tube | 3.62e-15 | 41 |
future forebrain | 3.62e-15 | 41 |
brain grey matter | 3.81e-15 | 34 |
gray matter | 3.81e-15 | 34 |
regional part of telencephalon | 7.86e-15 | 32 |
nervous system | 8.83e-15 | 89 |
regional part of cerebral cortex | 1.05e-13 | 22 |
brain | 3.47e-13 | 68 |
future brain | 3.47e-13 | 68 |
cerebral cortex | 8.80e-13 | 25 |
pallium | 8.80e-13 | 25 |
neocortex | 1.16e-12 | 20 |
tube | 4.34e-12 | 192 |
pre-chordal neural plate | 9.38e-12 | 61 |
neural plate | 1.22e-11 | 82 |
presumptive neural plate | 1.22e-11 | 82 |
neurectoderm | 2.81e-11 | 86 |
anatomical conduit | 1.73e-08 | 240 |
ecto-epithelium | 1.97e-07 | 104 |
adult organism | 9.07e-07 | 114 |