FFCP PHASE1:Hg19::chr19:45974032..45974054,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45974032..45974054,+
|short_description=p9@FOSB
|description=CAGE_peak_9_at_FOSB_5end
|association_with_transcript=-468bp_to_BC127825_5end
|EntrezGene=23...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt=A1L186 | |UniProt=A1L186 | ||
|association_with_transcript=-468bp_to_BC127825_5end | |||
|cluster_id=chr19:45974032..45974054,+ | |||
|coexpression_cluster_id=C269 | |||
|description=CAGE_peak_9_at_FOSB_5end | |||
|id=chr19:45974032..45974054,+ | |||
|ontology_enrichment_celltype=CL:0002057!2.45e-43!42;CL:0000860!1.67e-39!45;CL:0000766!1.43e-32!76;CL:0000557!1.24e-30!71;CL:0000738!7.12e-28!140;CL:0000839!9.23e-28!70;CL:0002009!2.47e-27!65;CL:0002194!4.07e-25!63;CL:0000576!4.07e-25!63;CL:0000040!4.07e-25!63;CL:0000559!4.07e-25!63;CL:0002031!8.24e-24!124;CL:0000037!2.68e-21!172;CL:0000566!2.68e-21!172;CL:0000763!4.26e-21!112;CL:0000049!4.26e-21!112;CL:0002087!1.53e-20!119;CL:0000988!1.04e-19!182;CL:0002032!2.91e-19!165;CL:0000837!2.91e-19!165;CL:0000134!5.80e-11!358;CL:0002320!1.02e-10!365;CL:0000219!4.20e-09!390 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.08e-54;33!CL:0002057;9.08e-54;33!CL:0000473;1.53e-36;39!CL:0000234;1.53e-36;39!CL:0000576;6.05e-31;48!CL:0000766;3.73e-24;69!CL:0000763;5.13e-13;100!CL:0000767;1.98e-11;3!CL:0002087;8.62e-11;104!CL:0000738;2.71e-10;136!CL:0001014;1.40e-08;2!CL:0001016;1.40e-08;2!CL:0000097;6.87e-08;5!CL:0000094;1.82e-07;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.98e-58,42;CL:0002057,3.98e-58,42;CL:0000766,3.14e-51,72;CL:0000473,5.50e-50,48;CL:0000234,5.50e-50,48;CL:0000557,7.49e-49,67;CL:0002009,1.98e-43,61;CL:0000839,3.76e-43,66;CL:0002194,1.36e-38,59;CL:0000576,1.36e-38,59;CL:0000040,1.36e-38,59;CL:0000559,1.36e-38,59;CL:0000738,1.75e-38,136;CL:0000763,5.59e-36,108;CL:0000049,5.59e-36,108;CL:0002031,1.80e-33,120;CL:0000037,2.38e-29,168;CL:0002032,2.85e-29,161;CL:0000837,2.85e-29,161;CL:0000988,2.26e-27,177;CL:0002087,1.09e-26,115;CL:0000134,5.91e-18,354;CL:0002320,2.14e-17,361;CL:0000219,1.98e-15,386;CL:0000048,5.08e-13,427;CL:0000723,1.09e-12,433;CL:0000034,2.93e-12,441;CL:0000767,2.22e-11,3;CL:0001014,1.87e-08,2;CL:0001016,1.87e-08,2;CL:0000097,7.21e-08,5;CL:0002028,7.21e-08,5;CL:0000094,1.73e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;5.55e-43;42!CL:0000049;3.33e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.44e-28!80;UBERON:0001474!8.87e-27!86;UBERON:0002390!1.14e-24!102;UBERON:0003061!1.14e-24!102;UBERON:0004765!1.77e-22!101;UBERON:0001434!1.77e-22!101;UBERON:0002193!5.57e-21!112;UBERON:0002405!6.99e-18!115;UBERON:0002384!3.14e-10!375;UBERON:0002204!1.75e-08!167;UBERON:0003081!4.39e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.40e-42,76;UBERON:0001474,2.61e-41,82;UBERON:0004765,5.97e-37,90;UBERON:0002390,2.85e-33,98;UBERON:0003061,2.85e-33,98;UBERON:0002405,4.19e-33,93;UBERON:0001434,1.79e-32,100;UBERON:0002193,1.83e-29,108;UBERON:0002384,1.23e-16,371;UBERON:0002204,2.77e-16,167;UBERON:0003081,4.19e-14,203;UBERON:0000926,7.06e-07,315;UBERON:0004120,7.06e-07,315;UBERON:0006603,7.06e-07,315 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.01260960310899,0,0,0,0,0,0.880801318004542,1.10799081706375,1.60435557976113,1.30206522429511,0,0,0,1.01778767145695,0.377875943688809,0.970336244751265,2.55671940596253,0.822335776043652,4.64559556342655,1.43846196161075,2.0492856522328,0.945928919554341,4.82643953031266,2.5819387343353,9.47985406160392,2.63539275359647,3.547779950752,1.34834090667051,4.89734227793444,2.88836124368484,4.47535988059329,0.329851300186716,1.39624560335142,0.426224750532694,2.32167390902867,1.13477044938228,4.35975574296902,4.52247597462138,6.25779502104242,2.17188844705117,1.81619850790011,1.47311054395026,1.26584954976354,0,0.212604299965044,0.209658645508376,0.44931452458598,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.393419540227666,2.75107533924415,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,3.20928234940209,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,9.53709331487551,4.32359860250884,8.58448547299384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.256686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,1.94142780736755,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,1.53580351049616,0,0,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0,10.8460394308853,0,17.0571128325963,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.391969589657511,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0.160753148465019,0,0,1.1248694577575,8.51182150013745,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,1.5041393641362,2.45076461410769,1.96723578425883,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0.302461847526478,0.466311601748341,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0.751873899297419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0.327543835020193,0.443568258651136,0,0.781078098613847,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,0.4582137370881,1.24082554265728,0,0.223710863595585,0,0.121917924982269,0,0,0,1.94284397223656,0.233939463462106,0.397901550322736,0.356760272332706,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.57345710739562,1.15148819429164,2.01260960310899,0,0,0,0,0,0.880801318004542,1.10799081706375,1.60435557976113,1.30206522429511,0,0,0,1.01778767145695,0.377875943688809,0.970336244751265,2.55671940596253,0.822335776043652,4.64559556342655,1.43846196161075,2.0492856522328,0.945928919554341,4.82643953031266,2.5819387343353,9.47985406160392,2.63539275359647,3.547779950752,1.34834090667051,4.89734227793444,2.88836124368484,4.47535988059329,0.329851300186716,1.39624560335142,0.426224750532694,2.32167390902867,1.13477044938228,4.35975574296902,4.52247597462138,6.25779502104242,2.17188844705117,1.81619850790011,1.47311054395026,1.26584954976354,0,0.212604299965044,0.209658645508376,0.44931452458598,0.300353785683013,0,0,0,0.182664153764634,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,0,0.560508562981536,0.263384084775077,0.393419540227666,2.75107533924415,1.02800749499755,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,1.04535523804977,0,0.766440987203842,0,0.253019692019503,0,0,0,0,0,0,0,0,1.00803371612366,3.20928234940209,0.434473211648397,0,0,0,0,0,0,0,0,0,0.221729397462564,0,0,0,0,0,0,0,0.238490624305342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252433774244115,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441463099414651,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.492663237895943,0,9.53709331487551,4.32359860250884,8.58448547299384,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.394061520403854,0.862510299438069,0.256686072559497,0,0,0,0,0,0.749007023947182,2.99161459204025,0,0,0,0,0,0,0,0,0,0,0,0,0.184369168541703,0,0,0,0,1.94142780736755,0.74709290462411,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.648473311192717,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.81991175580304,0,1.53580351049616,0,0,0.111308705022906,0,0,0.398495976502139,0.552567831062295,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,1.30213880542617,0,0,0,0,0,0,0.291604613383254,0,0,0,0,0,0,0.219385397153973,0,0.278847488557207,0,0,0,0,0,10.8460394308853,0,17.0571128325963,0,0,0,0,0,0,0,0,0.210998064528027,0.489698424477443,0.141353071433941,0,0,0,0,0,0.123563938946503,0,0,0.802577647298789,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0.520679215005393,0.391969589657511,0.0870592065804026,0,0,0,0,0,0.0969890164884194,0,0,0.137041924646751,0,0,0,0.160317640503067,0.426905989478705,0,0,0,0,0,0,0.707082103850386,0,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0.492137407573744,0,0,0,0.160753148465019,0,0,1.1248694577575,8.51182150013745,0,0,0,0,0.316801009558219,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1760712134779,1.5041393641362,2.45076461410769,1.96723578425883,0,0,0,0,0,0,0,0,0,0.151649117541648,0,0,0,0,0,0,0,0.378806010550178,0,0,0.457680136793847,0.302461847526478,0.466311601748341,0,0,0,0.310525913752519,0,0,0,0,0,0.406870733204662,0,0.751873899297419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327609848846413,0.245772908753719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0.0788617450012534,0,2.1160556621441,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0.366857197043358,0,0,0,0,0,0,0,0,0.327543835020193,0.443568258651136,0,0.781078098613847,0,0,0,0,0,0,0.511049710558381,0,0,0,0,0.0887023701626388,0,0.171488009437418,0.0679697329768317,0,0.118193840883968,0,0,0,0.280272163313789,0.913158720509496,0,0,0,0.158013611732727,0.23248285073625,0,0,0,0,0,0,0,0,0,0.4582137370881,1.24082554265728,0,0.223710863595585,0,0.121917924982269,0,0,0,1.94284397223656,0.233939463462106,0.397901550322736,0.356760272332706,0,0,0,0,0,0.470317296361523,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0,0,0,0,0,0,0,0,0.112131862580613,0,0,0.217716747896961,0,0,0,0,0,0.106727345877715,0,0,0,0,0,0,0,0 | ||
|short_description=p9@FOSB | |||
}} | }} |
Latest revision as of 17:45, 18 September 2015
Short description: | p9@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_FOSB_5end |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | -468bp_to_BC127825_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | A1L186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.40e-42 | 76 |
bone element | 2.61e-41 | 82 |
skeletal element | 5.97e-37 | 90 |
hematopoietic system | 2.85e-33 | 98 |
blood island | 2.85e-33 | 98 |
immune system | 4.19e-33 | 93 |
skeletal system | 1.79e-32 | 100 |
hemolymphoid system | 1.83e-29 | 108 |
connective tissue | 1.23e-16 | 371 |
musculoskeletal system | 2.77e-16 | 167 |
lateral plate mesoderm | 4.19e-14 | 203 |
mesoderm | 7.06e-07 | 315 |
mesoderm-derived structure | 7.06e-07 | 315 |
presumptive mesoderm | 7.06e-07 | 315 |