FFCP PHASE1:Hg19::chr1:60280668..60280699,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51361 | |EntrezGene=51361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19884 | |HGNC=19884 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJC3 | |UniProt=Q9UJC3 | ||
|association_with_transcript=135bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | |association_with_transcript=135bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | ||
|cluster_id=chr1:60280668..60280699,+ | |||
|description=CAGE_peak_2_at_HOOK1_5end | |description=CAGE_peak_2_at_HOOK1_5end | ||
|id=chr1:60280668..60280699,+ | |id=chr1:60280668..60280699,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.40e-08!254;CL:0000223!2.46e-07!59 | |ontology_enrichment_celltype=CL:0000066!1.40e-08!254;CL:0000223!2.46e-07!59 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0001041;3.60e-09;30!UBERON:0009117;4.17e-08;10!UBERON:0005564;4.17e-08;10 | |||
|ontology_enrichment_disease=DOID:305!3.09e-28!106;DOID:0050687!9.27e-22!143;DOID:299!1.06e-08!25;DOID:162!1.07e-08!235;DOID:14566!6.91e-08!239 | |||
|ontology_enrichment_disease_v019=DOID:305;1.04e-08;106!DOID:299;4.12e-08;25!DOID:3119;3.03e-07;14 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.58e-23,106;DOID:0050687,1.83e-20,143;DOID:162,1.23e-08,235;DOID:299,2.81e-08,25;DOID:14566,4.89e-08,239;DOID:3119,3.43e-07,14 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.41e-15!115;UBERON:0001049!6.44e-13!57;UBERON:0005068!6.44e-13!57;UBERON:0006241!6.44e-13!57;UBERON:0007135!6.44e-13!57;UBERON:0002780!4.06e-12!41;UBERON:0001890!4.06e-12!41;UBERON:0006240!4.06e-12!41;UBERON:0003080!1.59e-11!42;UBERON:0005743!8.16e-11!86;UBERON:0002616!2.41e-10!59;UBERON:0001017!3.97e-10!82;UBERON:0000073!8.74e-10!94;UBERON:0001016!8.74e-10!94;UBERON:0004921!2.15e-09!129;UBERON:0004185!2.15e-09!129;UBERON:0002346!2.17e-09!90;UBERON:0001007!2.88e-09!155;UBERON:0001555!2.88e-09!155;UBERON:0007026!2.88e-09!155;UBERON:0001869!3.29e-09!32;UBERON:0000955!3.37e-09!69;UBERON:0006238!3.37e-09!69;UBERON:0002619!5.12e-09!22;UBERON:0004119!9.57e-09!169;UBERON:0000925!9.57e-09!169;UBERON:0006595!9.57e-09!169;UBERON:0001893!1.10e-08!34;UBERON:0003075!1.84e-08!86;UBERON:0007284!1.84e-08!86;UBERON:0002020!1.99e-08!34;UBERON:0003528!1.99e-08!34;UBERON:0000077!2.15e-08!130;UBERON:0002791!2.63e-08!33;UBERON:0001950!3.25e-08!20;UBERON:0003056!3.29e-08!61;UBERON:0001041!9.00e-08!98;UBERON:0005911!9.07e-08!82;UBERON:0000466!3.54e-07!126;UBERON:0000956!4.19e-07!25;UBERON:0000203!4.19e-07!25;UBERON:0000153!4.78e-07!129;UBERON:0007811!4.78e-07!129 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.08e-09;22!UBERON:0002780;2.96e-09;41!UBERON:0001890;2.96e-09;41!UBERON:0001869;2.35e-08;32!UBERON:0001950;2.94e-08;20!UBERON:0002791;7.31e-08;32!UBERON:0000956;9.51e-08;25!UBERON:0000203;9.51e-08;25!UBERON:0000073;1.46e-07;53!UBERON:0002616;1.46e-07;53!UBERON:0001893;4.57e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002780,2.66e-12,41;UBERON:0001890,2.66e-12,41;UBERON:0003080,2.66e-12,41;UBERON:0006240,2.66e-12,41;UBERON:0000073,4.02e-12,53;UBERON:0002616,4.02e-12,53;UBERON:0011216,1.63e-11,223;UBERON:0001049,5.92e-11,56;UBERON:0005068,5.92e-11,56;UBERON:0006241,5.92e-11,56;UBERON:0007135,5.92e-11,56;UBERON:0000955,5.31e-10,68;UBERON:0006238,5.31e-10,68;UBERON:0002619,1.12e-09,22;UBERON:0001869,2.01e-09,32;UBERON:0003056,5.30e-09,61;UBERON:0001017,9.13e-09,81;UBERON:0001950,1.36e-08,20;UBERON:0002346,1.55e-08,86;UBERON:0001893,1.60e-08,34;UBERON:0002791,1.83e-08,32;UBERON:0001016,3.84e-08,89;UBERON:0000956,5.64e-08,25;UBERON:0000203,5.64e-08,25;UBERON:0003528,1.22e-07,34;UBERON:0002020,1.22e-07,34;UBERON:0003075,2.56e-07,82;UBERON:0007284,2.56e-07,82;UBERON:0007023,3.47e-07,114 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0.491467873003018,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.29902789771517,0.821005894499457,0.629686250509434,0.393364276848904,0.383829398097213,0.309632246632152,0.919421224478927,0,0,0,0,0.293600439334847,0,0,0.651032612147555,0,0,0,0,0,0,0,0,0,0,0,0,0,0.645484683583826,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,1.09227722252426,0,3.84057200309856,2.00197993518006,1.14950487990897,2.64417949113945,0,1.70763890732835,4.69789751496751,1.52909291250092,1.32171328579026,0,0,3.93419540227666,0.393010762749165,2.87842098599313,0,3.2592226663359,2.36723902867367,5.84480185223734,0,0.294605907474837,0,0.270803863765016,0.25618263945135,0,0.328875809207352,0.276350017785848,0.289803085735052,3.11401782640327,4.28065324943541,3.1360657141493,0,1.53288197440768,1.03088233644789,1.01207876807801,1.59282707162048,1.30216690771284,0,1.95747654801105,2.04778577847069,0,0.710331756132051,0,1.41124720257313,0.267440195783507,2.31719046212478,0,0,0,0,0,0,0,0,0.283604451492204,0,0.351339142772504,2.68507104770311,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0.860413786167011,1.70763188581434,1.59035721985782,1.39432731443422,1.7622379352613,1.26160425437814,0.36497735907583,0,0,0,0,0,0.236613600079688,0.674338760312407,0.241011029883482,0.220587945464788,0.435758888184812,0.237270619111097,0,0.196221465125346,0.38474715694639,0,0,0,0,3.80265104465493,0,1.77236972004421,0,1.8448265781467,0,0.548751427043128,0,0.301586917234893,0.833296006426766,0,0,0,0,0,0,0,0,0.790204397959275,1.71697232418975,0,0,0,0,0.335964256397719,0.425325291727159,0.179117045405697,0.290633938513962,0.383382679165211,0,0,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.299918973546171,0,0,0,0,0,0,0,0,0,0,1.18218456121156,1.07813787429759,1.79680250791648,0,0,0.773288812777695,0.335032530668698,0,0,0,1.24324654030811,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24060815673732,1.72571360654893,0.853820462427555,0,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,4.47179963489002,0.40101294060657,0.184161977871793,0,0,0,0,1.23224539367064,0,0,2.42768746453614,0,0,0.215915916102139,0,0.812839312631559,0,0.509752546090077,1.66215201785745,0,0,0,1.28225062558195,0,1.62689197332152,1.95777922130672,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0,0,0.330569830721956,0.192190067365106,0.382838137483752,0.30347334256665,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.577332676353072,0,1.08890984861323,0.847294206991012,0,0,0,0,0,0,0.569647187174163,0.238231775457789,0.822724546172388,0.648473311192717,1.08006287447623,0,0,0,0.245040215981032,2.41544127663434,0,0,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0.201799707191048,0,0,0,0,0,0,0,0,2.70455678475983,0,0,0.935702702041099,0,0,0,0,1.67121139316383,0,2.15012491469462,1.9882952955326,1.68803299692615,0.111308705022906,0,1.47787785689595,0.398495976502139,1.10513566212459,10.077309914171,0,0.984678443688556,0,1.3480252672099,1.61119057208048,0,0,0,0,0,1.11321717794222,1.99613798001194,4.94812746061943,3.93569999982881,0,1.0241410345695,3.30529745380596,2.6002644994473,3.10269035917318,0,3.29887490373255,0.885741385813839,1.08536794762867,9.15490417902499,3.42795705786796,2.65992857058193,2.85201016300164,0,0.697118721393016,0.769502585037971,0,4.84184199214926,0,11.7339161675769,0.638002319463839,0.457987967009312,0,0,0,0.831058409500782,0,0,0,0,0.635746315921515,20.2558141946906,13.7115558853684,3.25112064298064,4.9769387140681,0,0.442287822516696,1.22206028986725,0,0,0,0.269604531922708,0,1.40558667435203,0.729819156862664,3.13063390291344,0,0.789168805698781,0,2.14250933141343,0.063186579628488,2.25485129121739,1.03688191397247,0,0.661983911750998,0.313932918407225,1.19472429772959,9.10750547295337,0,3.99187398170801,0.881931576729399,1.13176968554523,1.39781334593624,0,0.19351266257817,0.292357268344742,0.164230914106418,0.581934098930517,0,6.77942222341597,0,0,3.29216138970569,3.32437350649165,2.56508224804908,0.640358984218058,0.999048047910651,3.02589876023623,0,5.8342299273068,0,0.372757606696298,1.41416420770077,0,0,0,0,1.20084057741958,0.273810757783986,0,0,0,0,0,0,2.39614800598789,0,0,0.604651252380536,0,8.15471646692177,4.80577412074064,5.52186251153815,6.2685295784392,0.196854963029498,0.846733320657845,2.38568906942791,1.22583065500418,0.803765742325096,2.06309154895851,2.07720169014593,3.14963448172101,5.41661368190565,1.64023802976667,0.335434687599266,5.20117668174708,2.25554728980492,3.2736104321016,0,1.53532157855556,0.714695326373367,0.662091970365432,0,0,0,0,1.19730191562487,0.492555124496034,0,0,5.27588041241097,2.65013777824443,0.129282956361551,0.66116300871345,0.855434189421647,1.40963004463334,1.28144895081234,2.67247318669432,0.828478110694391,0,0,1.58330377895165,1.91502377331055,0,0,0,0,8.63797529376289,1.7721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| ||
|short_description=p2@HOOK1 | |short_description=p2@HOOK1 | ||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p2@HOOK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_HOOK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 135bp_to_ENST00000371208, NM_015888, uc001czo.2_5end |
EntrezGene: | HOOK1 |
HGNC: | 19884 |
UniProt: | Q9UJC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of forebrain | 2.66e-12 | 41 |
forebrain | 2.66e-12 | 41 |
anterior neural tube | 2.66e-12 | 41 |
future forebrain | 2.66e-12 | 41 |
regional part of nervous system | 4.02e-12 | 53 |
regional part of brain | 4.02e-12 | 53 |
organ system subdivision | 1.63e-11 | 223 |
neural tube | 5.92e-11 | 56 |
neural rod | 5.92e-11 | 56 |
future spinal cord | 5.92e-11 | 56 |
neural keel | 5.92e-11 | 56 |
brain | 5.31e-10 | 68 |
future brain | 5.31e-10 | 68 |
regional part of cerebral cortex | 1.12e-09 | 22 |
cerebral hemisphere | 2.01e-09 | 32 |
pre-chordal neural plate | 5.30e-09 | 61 |
central nervous system | 9.13e-09 | 81 |
neocortex | 1.36e-08 | 20 |
neurectoderm | 1.55e-08 | 86 |
telencephalon | 1.60e-08 | 34 |
regional part of telencephalon | 1.83e-08 | 32 |
nervous system | 3.84e-08 | 89 |
cerebral cortex | 5.64e-08 | 25 |
pallium | 5.64e-08 | 25 |
brain grey matter | 1.22e-07 | 34 |
gray matter | 1.22e-07 | 34 |
neural plate | 2.56e-07 | 82 |
presumptive neural plate | 2.56e-07 | 82 |
adult organism | 3.47e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.58e-23 | 106 |
cell type cancer | 1.83e-20 | 143 |
cancer | 1.23e-08 | 235 |
adenocarcinoma | 2.81e-08 | 25 |
disease of cellular proliferation | 4.89e-08 | 239 |
gastrointestinal system cancer | 3.43e-07 | 14 |