FFCP PHASE1:Hg19::chr19:45974005..45974026,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:45974005..45974026,+
|short_description=p11@FOSB
|description=CAGE_peak_11_at_FOSB_5end
|association_with_transcript=-496bp_to_BC127825_5end
|EntrezGene=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2354 | |EntrezGene=2354 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3797 | |HGNC=3797 | ||
|TSSclassifier=strong | |||
|UniProt=A1L186 | |UniProt=A1L186 | ||
|association_with_transcript=-496bp_to_BC127825_5end | |||
|cluster_id=chr19:45974005..45974026,+ | |||
|coexpression_cluster_id=C269 | |||
|description=CAGE_peak_11_at_FOSB_5end | |||
|id=chr19:45974005..45974026,+ | |||
|ontology_enrichment_celltype=CL:0002057!5.04e-37!42;CL:0000860!9.31e-34!45;CL:0000738!6.70e-30!140;CL:0000766!1.21e-29!76;CL:0000557!1.28e-27!71;CL:0002031!4.29e-24!124;CL:0002009!7.90e-24!65;CL:0000037!1.38e-23!172;CL:0000566!1.38e-23!172;CL:0000839!3.46e-23!70;CL:0002087!1.01e-21!119;CL:0002194!1.09e-21!63;CL:0000576!1.09e-21!63;CL:0000040!1.09e-21!63;CL:0000559!1.09e-21!63;CL:0002032!2.54e-21!165;CL:0000837!2.54e-21!165;CL:0000988!3.40e-21!182;CL:0000763!6.02e-20!112;CL:0000049!6.02e-20!112;CL:0002320!2.15e-13!365;CL:0000134!5.09e-13!358;CL:0000219!2.54e-10!390;CL:0000063!2.50e-08!578;CL:0000048!7.74e-08!430;CL:0000723!1.97e-07!436;CL:0000034!2.32e-07!444;CL:0000094!4.41e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.02e-32;33!CL:0002057;3.02e-32;33!CL:0000473;3.54e-22;39!CL:0000234;3.54e-22;39!CL:0000576;9.40e-20;48!CL:0000766;2.89e-18;69!CL:0000763;1.75e-10;100!CL:0000097;1.97e-10;5!CL:0002541;3.84e-08;3!CL:0002393;4.55e-08;6!CL:0002397;4.55e-08;6!CL:0000738;8.07e-08;136!CL:0000767;1.74e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,4.06e-39,42;CL:0002057,4.06e-39,42;CL:0000557,5.69e-38,67;CL:0000766,7.35e-38,72;CL:0000473,1.09e-33,48;CL:0000234,1.09e-33,48;CL:0000839,6.85e-32,66;CL:0002009,3.95e-28,61;CL:0000763,4.21e-28,108;CL:0000049,4.21e-28,108;CL:0000738,6.58e-27,136;CL:0002194,4.38e-26,59;CL:0000576,4.38e-26,59;CL:0000040,4.38e-26,59;CL:0000559,4.38e-26,59;CL:0002031,9.22e-23,120;CL:0000037,2.49e-22,168;CL:0002032,7.23e-22,161;CL:0000837,7.23e-22,161;CL:0000988,7.21e-21,177;CL:0002087,9.17e-18,115;CL:0000134,1.56e-13,354;CL:0002320,3.96e-13,361;CL:0000219,1.06e-11,386;CL:0000097,2.04e-10,5;CL:0002028,2.04e-10,5;CL:0000034,2.99e-10,441;CL:0000048,5.93e-10,427;CL:0000723,1.03e-09,433;CL:0002541,3.65e-08,3;CL:0000767,2.13e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;4.16e-27;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.85e-27!80;UBERON:0001474!4.16e-26!86;UBERON:0004765!1.88e-23!101;UBERON:0001434!1.88e-23!101;UBERON:0002390!3.25e-23!102;UBERON:0003061!3.25e-23!102;UBERON:0002193!9.32e-21!112;UBERON:0002405!1.26e-18!115;UBERON:0002384!2.16e-12!375;UBERON:0002204!1.52e-10!167;UBERON:0003081!1.12e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0005631;1.59e-08;10!UBERON:0000158;1.59e-08;10!UBERON:0003124;3.84e-08;3!UBERON:0000920;3.84e-08;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001474,6.18e-33,82;UBERON:0002371,6.74e-33,76;UBERON:0004765,1.51e-29,90;UBERON:0002390,1.30e-26,98;UBERON:0003061,1.30e-26,98;UBERON:0001434,4.59e-26,100;UBERON:0002405,5.76e-26,93;UBERON:0002193,1.17e-23,108;UBERON:0002204,9.34e-15,167;UBERON:0002384,1.41e-12,371;UBERON:0003081,2.63e-12,203;UBERON:0000920,3.65e-08,3 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0.123766352960047,0.331397375727916,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.786728553697808,1.53531759238885,1.23852898652861,0,0,0,0,0,0.293600439334847,1.66198622559563,2.00544447470142,1.95309783644267,0,0,0,0.726991193897824,0.377875943688809,0.727752183563449,3.48643555358527,0.411167888021826,0.929119112685311,0.575384784644301,1.5369642391746,0.945928919554341,3.44745680736619,0,4.06279459783025,1.88242339542605,0.818718450173537,0.674170453335254,1.83650335422542,1.60464513538047,7.03270838378945,0.329851300186716,0.398927315243264,1.27867425159808,0.290209238628584,0,1.86846674698672,1.7587406567972,6.77927793946262,1.3031330682307,1.21079900526674,1.10483290796269,2.53169909952708,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,1.1384259382189,0.587237189370939,0.382273228125229,1.32171328579026,0,0,0.393419540227666,1.96505381374582,0.411202997999018,0,0.651844533267181,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.766440987203842,0,0,0,0,0,0,0,0,0,0,0.80642697289893,3.4767225451856,0.868946423296794,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0.238490624305342,0.571994910780128,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,12.8543431635279,6.62951785718023,10.6043644078159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.285955987316295,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.112085143993527,0.591092280605782,0.862510299438069,0.77005821767849,0,0,0,0,0,0.749007023947182,0,0.414415513436035,0,0,0,0.207970861530807,0.178428988797162,0,0,0,0,0,0,0,0,0,0,0,1.07857100409308,0.640365346820666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325378394664303,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0.211107635297664,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.86493381685228,0.296964680832639,1.84296421259539,0,0,0,0,0,0.597743964753209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,4.14701507651495,0,6.92945208824225,0,0,0,0,0,0,0,0,0.210998064528027,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0.242780379534093,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0.867798691675654,0.195984794828755,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0,0,0.0801588202515337,0.213452994739353,0.19980960958213,0,0,0,0,0,0.235694034616795,0,0,0,0,0,0,2.55493176133945,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160753148465019,0,0,0.449947783103001,3.86900977278975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0.628817220398664,0,0,0,0,0,1.63205341010842,0.2506898940227,1.22538230705385,0.655745261419609,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.947015026375446,0,0.889811221596536,0,0.151230923763239,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0.537052785212442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.737318726261158,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,1.76337971845342,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0.231051332300676,0,0,0,0,0,0,0,0.163771917510097,0.147856086217045,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.9164274741762,0.62041277132864,0.955538938977433,0.223710863595585,0,0,0,0.102662806856247,1.1598144313382,0,0,0.198950775161368,0.118920090777569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.352894871715692,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0,0,0,0,0,0,0.213233981900981,0,0,0,0,0,0.606351566874658,0.653150243690884,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p11@FOSB | |||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p11@FOSB |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_FOSB_5end |
Coexpression cluster: | C269_Basophils_Mast_Eosinophils_mature_CD14_chorionic_CD4 |
Association with transcript: | -496bp_to_BC127825_5end |
EntrezGene: | FOSB |
HGNC: | 3797 |
UniProt: | A1L186 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone element | 6.18e-33 | 82 |
bone marrow | 6.74e-33 | 76 |
skeletal element | 1.51e-29 | 90 |
hematopoietic system | 1.30e-26 | 98 |
blood island | 1.30e-26 | 98 |
skeletal system | 4.59e-26 | 100 |
immune system | 5.76e-26 | 93 |
hemolymphoid system | 1.17e-23 | 108 |
musculoskeletal system | 9.34e-15 | 167 |
connective tissue | 1.41e-12 | 371 |
lateral plate mesoderm | 2.63e-12 | 203 |
egg chorion | 3.65e-08 | 3 |