FFCP PHASE1:Hg19::chr1:60280611..60280663,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51361 | |EntrezGene=51361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19884 | |HGNC=19884 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJC3 | |UniProt=Q9UJC3 | ||
|association_with_transcript=78bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | |association_with_transcript=78bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | ||
|cluster_id=chr1:60280611..60280663,+ | |||
|description=CAGE_peak_1_at_HOOK1_5end | |description=CAGE_peak_1_at_HOOK1_5end | ||
|id=chr1:60280611..60280663,+ | |id=chr1:60280611..60280663,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype=CL:0000066!1.19e-09!254;CL:0000223!1.07e-07!59;CL:0000542!3.92e-07!53;CL:0000051!3.92e-07!53;CL:0000838!8.43e-07!52 | ||
| | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_disease=DOID:305;2.90e-09;106!DOID:299;2.49e-08;25 | |ontology_enrichment_celltype_v019_2=CL:0000066,5.07e-08,253;CL:0000542,7.71e-08,53;CL:0000051,7.71e-08,53;CL:0000838,1.82e-07,52 | ||
|ontology_enrichment_uberon=UBERON:0002619;2.51e-07;22!UBERON:0001950;8.42e-07;20!UBERON:0004921;9.97e-07;33 | |ontology_enrichment_development_v019=UBERON:0001041;1.85e-08;30 | ||
|ontology_enrichment_disease=DOID:305!3.43e-27!106;DOID:0050687!1.36e-20!143;DOID:299!1.80e-09!25 | |||
|ontology_enrichment_disease_v019=DOID:305;2.90e-09;106!DOID:299;2.49e-08;25 | |||
|ontology_enrichment_disease_v019_2=DOID:305,3.51e-27,106;DOID:0050687,4.54e-21,143;DOID:299,1.97e-08,25;DOID:162,3.82e-08,235;DOID:14566,2.22e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.91e-17!115;UBERON:0004921!4.93e-11!129;UBERON:0004185!4.93e-11!129;UBERON:0001007!2.47e-10!155;UBERON:0001555!2.47e-10!155;UBERON:0007026!2.47e-10!155;UBERON:0004119!3.94e-10!169;UBERON:0000925!3.94e-10!169;UBERON:0006595!3.94e-10!169;UBERON:0001049!1.27e-09!57;UBERON:0005068!1.27e-09!57;UBERON:0006241!1.27e-09!57;UBERON:0007135!1.27e-09!57;UBERON:0003080!1.81e-09!42;UBERON:0002780!3.20e-09!41;UBERON:0001890!3.20e-09!41;UBERON:0006240!3.20e-09!41;UBERON:0000077!9.07e-09!130;UBERON:0001041!1.63e-08!98;UBERON:0002346!1.93e-08!90;UBERON:0005743!2.31e-08!86;UBERON:0002616!2.54e-08!59;UBERON:0003056!8.76e-08!61;UBERON:0001017!1.08e-07!82;UBERON:0000073!1.43e-07!94;UBERON:0001016!1.43e-07!94;UBERON:0000955!1.49e-07!69;UBERON:0006238!1.49e-07!69;UBERON:0003075!1.95e-07!86;UBERON:0007284!1.95e-07!86;UBERON:0000466!2.16e-07!126;UBERON:0000153!3.17e-07!129;UBERON:0007811!3.17e-07!129;UBERON:0001869!5.68e-07!32;UBERON:0005911!5.70e-07!82;UBERON:0001893!8.11e-07!34;UBERON:0002619!8.39e-07!22 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.51e-07;22!UBERON:0001950;8.42e-07;20!UBERON:0004921;9.97e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,6.10e-14,114;UBERON:0011216,5.86e-12,223;UBERON:0004921,2.95e-10,118;UBERON:0001007,6.82e-09,145;UBERON:0001555,6.82e-09,145;UBERON:0007026,6.82e-09,145;UBERON:0002780,2.56e-08,41;UBERON:0001890,2.56e-08,41;UBERON:0003080,2.56e-08,41;UBERON:0006240,2.56e-08,41;UBERON:0004119,2.65e-08,160;UBERON:0000925,2.65e-08,160;UBERON:0006595,2.65e-08,160;UBERON:0000073,6.31e-08,53;UBERON:0002616,6.31e-08,53;UBERON:0002619,2.02e-07,22;UBERON:0001041,2.62e-07,87;UBERON:0001869,4.44e-07,32;UBERON:0001049,6.63e-07,56;UBERON:0005068,6.63e-07,56;UBERON:0006241,6.63e-07,56;UBERON:0007135,6.63e-07,56;UBERON:0001950,6.67e-07,20;UBERON:0003056,8.47e-07,61 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0.218441372130172,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0.136874425072884,0,6.18948586558405,4.67973359864691,5.58846547327123,0.393364276848904,0,0.154816123316076,0,0.30120591877825,0.739508020333575,0,0,1.76160263600908,2.21598163412751,1.00272223735071,0.651032612147555,0,0,0,0,0.377875943688809,0,0,0,0,0,0,0,0,0,0,0.188242339542605,0,0,0,0.320929027076094,0,0,0.199463657621632,0,0,0,0,0,0,0,1.21079900526674,0,0,0,0,0,0,0,0,0,0,0,1.75996244461323,4.36910889009705,2.66852776159066,3.84057200309856,4.80475184443215,5.17277195959035,4.62731410949403,3.81621501814146,3.98449078376614,5.87237189370939,7.26319133437935,0,1.68152568894461,1.05353633910031,12.982844827513,7.07419372948497,4.93443597598822,0,7.82213439920617,8.99550830895993,9.74133642039557,0,1.76763544484902,1.77227115666897,0.541607727530031,0,0.130059347559878,1.64437904603676,2.21080014228679,4.63684937176084,9.63862660553393,16.8550721696519,7.31748666634838,0.226618685395132,3.44898444241729,4.46715679127419,5.06039384039006,2.54852331459277,2.60433381542567,3.8018081777935,6.17357988218868,5.37543766848557,4.99722906209383,2.13099526839615,4.92676798152628,3.62892137804518,2.13952156626806,4.92402973201517,0,0,0,0,0,0,0,0,0.850813354476611,0,1.14185221401064,3.07800827419625,1.09288586487763,2.22470665670658,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.773043412653187,0.545492241181669,0.860413786167011,11.2215809639228,6.75901818439575,5.57730925773688,6.3233243559376,6.81266297364197,3.28479623168247,0,0,0,0,0,1.18306800039844,2.02301628093722,1.44606617930089,1.21323370005633,1.52515610864684,0.949082476444386,0.808987848960987,1.56977172100277,0.38474715694639,0,0,0,0,17.7457048750563,10.8110993834539,10.6342183202653,0,9.34712132927663,0.171567810298526,2.08525542276389,0,3.11639814476056,5.64789515467031,0,0,0,1.73895607462615,0,0,0,0,3.1608175918371,1.71697232418975,0,0,0,0,2.01578553838631,1.27597587518148,1.88072897675981,0.581267877027924,0.766765358330422,0,0,0.207328115540772,0.144119953416961,0.37872730027914,0.063497894292169,0,0,0,0.102827492703324,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699810938274399,0,0,0,0,0,0,0,0,0,0,2.75843064282698,3.88129634747131,2.56686072559497,0,0,0.773288812777695,0.167516265334349,0.637938751653163,0,0,0.828831026872071,0,0,0,0,0,0,0,0,0,1.03473071292505,0,0,0,0,0,5.16920065307218,5.1771408196468,3.94891963872744,0.606255142892519,0,0.604780586659361,0,0,0,0,0,0,0,0,0,0,0,0,8.82273982018842,0.601519410909855,3.59115856849996,0,0,0,2.70719767744447,4.1588282036384,1.56869953835371,1.46139224653261,6.64975262025117,0,0,0.215915916102139,0,0.270946437543853,0,2.03901018436031,1.66215201785745,1.34324852833307,0,0,2.56450125116389,1.31205858279882,2.27764876265012,7.31591182698828,0.0915694648183434,0.247528499761764,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,1.81813406897076,1.72971060628596,3.44554323735377,3.0347334256665,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.82822014178473,0.670302275535787,1.08890984861323,7.06078505825844,0,0,0,1.1486170010348,2.02979043692868,0.764637207142375,2.27858874869665,2.62054953003568,2.05681136543097,1.29694662238543,1.62009431171434,0,0,0,3.43056302373444,6.50311112940016,0,0,0,0,0,0,0,0,0,0,0,1.01575066680962,0,0,0,0,0,0,0,0,0,0,8.38412603275548,0,5.63948020351398,12.5384162073507,0.146508179271894,0,0,0,7.40107902686839,3.26661148915902,8.29333895667927,9.94147647766298,2.2507106625682,1.00177834520615,0,2.32237948940793,1.79323189425963,1.93398740871803,27.2087367682618,0,6.15424027305347,0,4.04407580162971,7.16084698702437,0,1.87422470710174,0,0,5.81599647657131,2.59750674853184,1.99613798001194,11.198393726665,12.069479999475,3.62499787717397,5.80346586256048,12.4584288643455,9.69189495248539,15.1687084226244,0,5.20874984799877,5.31444831488303,6.99459344027366,18.30980835805,7.40881041539205,9.16197618755997,4.16832254592548,0,3.48559360696508,1.76985594558733,0,12.6810147413433,0,23.6851270789978,4.14701507651495,0.824378340616761,2.66517388009317,0,0,3.15802195610297,0,0,0,0,1.11255605286265,53.3825103255908,27.586344578896,6.78494742882916,20.5569207754987,1.99052386215701,4.68825091867698,5.49927130440263,0,0,0,0.471807930864739,0.802577647298789,3.04543779442941,1.45963831372533,9.19623708980822,0,5.12959723704208,7.25944296291983,3.0607276163049,0.31593289814244,12.4768438114029,2.90326935912292,0.664653872707185,0.661983911750998,0,2.38944859545918,26.1840782347409,0,12.8434206367997,5.78155144744828,5.13649318824375,4.54289337429278,0,1.74161396320353,1.68105429298227,1.88865551222381,5.43138492335149,0,14.2367866691735,0,0,5.38141765624969,12.3197371122926,8.09604084540491,1.92107695265417,1.9980960958213,11.9595046237908,0,12.6980298417854,0,1.61528296235062,4.4781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| ||
|short_description=p1@HOOK1 | |short_description=p1@HOOK1 | ||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p1@HOOK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HOOK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 78bp_to_ENST00000371208, NM_015888, uc001czo.2_5end |
EntrezGene: | HOOK1 |
HGNC: | 19884 |
UniProt: | Q9UJC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 5.07e-08 | 253 |
lymphocyte | 7.71e-08 | 53 |
common lymphoid progenitor | 7.71e-08 | 53 |
lymphoid lineage restricted progenitor cell | 1.82e-07 | 52 |
Ontology term | p-value | n |
---|---|---|
adult organism | 6.10e-14 | 114 |
organ system subdivision | 5.86e-12 | 223 |
subdivision of digestive tract | 2.95e-10 | 118 |
digestive system | 6.82e-09 | 145 |
digestive tract | 6.82e-09 | 145 |
primitive gut | 6.82e-09 | 145 |
regional part of forebrain | 2.56e-08 | 41 |
forebrain | 2.56e-08 | 41 |
anterior neural tube | 2.56e-08 | 41 |
future forebrain | 2.56e-08 | 41 |
endoderm-derived structure | 2.65e-08 | 160 |
endoderm | 2.65e-08 | 160 |
presumptive endoderm | 2.65e-08 | 160 |
regional part of nervous system | 6.31e-08 | 53 |
regional part of brain | 6.31e-08 | 53 |
regional part of cerebral cortex | 2.02e-07 | 22 |
foregut | 2.62e-07 | 87 |
cerebral hemisphere | 4.44e-07 | 32 |
neural tube | 6.63e-07 | 56 |
neural rod | 6.63e-07 | 56 |
future spinal cord | 6.63e-07 | 56 |
neural keel | 6.63e-07 | 56 |
neocortex | 6.67e-07 | 20 |
pre-chordal neural plate | 8.47e-07 | 61 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.51e-27 | 106 |
cell type cancer | 4.54e-21 | 143 |
adenocarcinoma | 1.97e-08 | 25 |
cancer | 3.82e-08 | 235 |
disease of cellular proliferation | 2.22e-07 | 239 |